prot_L-elsbetiae_contig5118.13178.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5118.13178.1
Unique Nameprot_L-elsbetiae_contig5118.13178.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length351
Homology
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BLAST of mRNA_L-elsbetiae_contig5118.13178.1 vs. uniprot
Match: D7FNM2_ECTSI (Ankyrin repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNM2_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 5.800e-38
Identity = 181/308 (58.77%), Postives = 201/308 (65.26%), Query Frame = 0 
Query:    1 MLLANVSSDVLSQLERFKESFLWAAAKGGRVEECESLVQMGTDVNWVSPEGDTPLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAFESQGPHIPVGMLRRLNDITLRTSRRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS---------ETLRAPLSRGR-PESN-DSNTPGWR-RGGAGHQRDHP--TDDGRGSTADTRSATISTGRGERNEAQREG----EGRTTFPSIARKVGSANTGSRQLSSFSIASRSGSSGGERFQSSDDE 290
            M+L N+SS VLSQL+R KESFLWAAAKGGRVEECESL++MGTD+NWVSPEGDTPLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  FESQGPH+P GML+RL+ I  R+ RR                                 S         +TL A  + G  PE+N      GWR R   G    H   TDD     A    A ISTG G R++AQRE     EGRTTFPSI+RK GS +  SR  S    A R+ SS G+  +SSDDE
Sbjct:    1 MMLGNMSSSVLSQLDRLKESFLWAAAKGGRVEECESLLEMGTDINWVSPEGDTPLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFESQGPHVPDGMLQRLDTIAQRSGRRTHHHLGISTAAINTSTFTTSSGRSAQDGGGSMSSRRSNTVLDSDTLSARATGGGVPENNIGDGRSGWRWRSNTGRIEHHVPLTDDAHDGAAGVGPAAISTGDGGRDDAQREERGGVEGRTTFPSISRKAGSTSADSRPSSRVHSAGRAASSSGDGVRSSDDE 308
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BLAST of mRNA_L-elsbetiae_contig5118.13178.1 vs. uniprot
Match: A0A836CF95_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF95_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 9.220e-12
Identity = 35/47 (74.47%), Postives = 39/47 (82.98%), Query Frame = 0 
Query:   10 VLSQLERFKESFLWAAAKGGRVEECESLVQMGTDVNWVSPEGDTPLL 56
            VLSQL R KESFL AAAKGGRV+EC SL+++G DVNW SPE DT LL
Sbjct:    9 VLSQLHRLKESFLLAAAKGGRVDECRSLLELGADVNWSSPEQDTCLL 55
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BLAST of mRNA_L-elsbetiae_contig5118.13178.1 vs. uniprot
Match: A0A7S1U254_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U254_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 4.870e-11
Identity = 31/45 (68.89%), Postives = 36/45 (80.00%), Query Frame = 0 
Query:    9 DVLSQLERFKESFLWAAAKGGRVEECESLVQMGTDVNWVSPEGDT 53
            D+ S LER KESFLWAAA+GGR EECESL++MG DVNW    GD+
Sbjct:    6 DLTSHLERLKESFLWAAARGGREEECESLLEMGADVNWTHQNGDS 50
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BLAST of mRNA_L-elsbetiae_contig5118.13178.1 vs. uniprot
Match: A0A8J2SNL1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SNL1_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.900e-8
Identity = 32/49 (65.31%), Postives = 39/49 (79.59%), Query Frame = 0 
Query:    9 DVLSQLERFKESFLWAAAKGGRVEECESLVQMGTDVNWVS-PEGDTPLL 56
            D+  QL+R KESFLWAAAKGGR EE ESL+ +G DVNW +  EG+TPL+
Sbjct:    2 DIGHQLDRMKESFLWAAAKGGREEEVESLLSIGADVNWRNGDEGETPLI 50
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5118.13178.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FNM2_ECTSI5.800e-3858.77Ankyrin repeat protein n=1 Tax=Ectocarpus siliculo... [more]
A0A836CF95_9STRA9.220e-1274.47Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
A0A7S1U254_9STRA4.870e-1168.89Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A8J2SNL1_9STRA2.900e-865.31Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 83..112
e-value: 5.2E-4
score: 29.3
coord: 17..46
e-value: 310.0
score: 8.8
coord: 50..79
e-value: 3.5E-4
score: 29.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 50..82
score: 10.419
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 83..115
score: 12.583
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 24..114
e-value: 1.0E-13
score: 51.6
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 17..121
score: 26.974
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 7..124
e-value: 6.5E-29
score: 102.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 18..122
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 16..274

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5118contigL-elsbetiae_contig5118:1306..5165 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5118.13178.1mRNA_L-elsbetiae_contig5118.13178.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5118 1300..5165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5118.13178.1 ID=prot_L-elsbetiae_contig5118.13178.1|Name=mRNA_L-elsbetiae_contig5118.13178.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=351bp
MLLANVSSDVLSQLERFKESFLWAAAKGGRVEECESLVQMGTDVNWVSPE
GDTPLLAACRNGHISTALCLLSHGASANQAAKDGQTALHLSCRHGQEAVA
EALILGGADVFARDNNGATAFESQGPHIPVGMLRRLNDITLRTSRRNHHH
DDISIEAAANSTDNDTPDGVASSRRHNNNSETLRAPLSRGRPESNDSNTP
GWRRGGAGHQRDHPTDDGRGSTADTRSATISTGRGERNEAQREGEGRTTF
PSIARKVGSANTGSRQLSSFSIASRSGSSGGERFQSSDDEDELLYEAEPR
MRILSGMYRGSGPLSSRQQGGSTVRNRGGGSEGFPEHTQLLSVGAPVPHA
V
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf