prot_L-elsbetiae_contig5079.13111.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5079.13111.1
Unique Nameprot_L-elsbetiae_contig5079.13111.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length150
Homology
BLAST of mRNA_L-elsbetiae_contig5079.13111.1 vs. uniprot
Match: D8LRC0_ECTSI (W2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRC0_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 1.450e-77
Identity = 125/143 (87.41%), Postives = 125/143 (87.41%), Query Frame = 0
Query:    1 MPRVIGKVEGCGNGIKTVIFNVTDLSLALKRDAGEVCKFFGAELGAQAREKGGTTRGTLDNTVDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKSK 143
            MPRVIGKVEG GNGIKTVIFNV DLSLALKRD GEVCKFFG ELGAQ R           N  DERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKSK
Sbjct:   22 MPRVIGKVEGRGNGIKTVIFNVMDLSLALKRDPGEVCKFFGTELGAQTRY----------NEEDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKSK 154          
BLAST of mRNA_L-elsbetiae_contig5079.13111.1 vs. uniprot
Match: B8BW00_THAPS (W2 domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BW00_THAPS)

HSP 1 Score: 187 bits (475), Expect = 2.760e-55
Identity = 93/145 (64.14%), Postives = 111/145 (76.55%), Query Frame = 0
Query:    1 MPRVIGKVEGCGNGIKTVIFNVTDLSLALKRDAGEVCKFFGAELGAQAREKGGTTRGTLDNTVDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKSKDK 145
            MP V GK+EG GNGIKTVI N++D+ L+L RDAGEV KFFG ELGAQ          T  NT  +RA+VNGAHT+  LQQ+VHKY+ELFVLCPNCRLPE++YKIK+G I+HKC ACG K+ VDM+HKLCTYI+   KKAK+   K
Sbjct:   25 MPTVYGKIEGKGNGIKTVIPNISDVGLSLHRDAGEVNKFFGCELGAQ----------TTYNTETDRAVVNGAHTDQVLQQMVHKYIELFVLCPNCRLPETEYKIKSGMIYHKCAACGNKDAVDMTHKLCTYILAQDKKAKQDAKK 159          
BLAST of mRNA_L-elsbetiae_contig5079.13111.1 vs. uniprot
Match: A0A7S3DU57_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DU57_9STRA)

HSP 1 Score: 181 bits (458), Expect = 3.140e-55
Identity = 92/147 (62.59%), Postives = 109/147 (74.15%), Query Frame = 0
Query:    1 MPRVIGKVEGCGNGIKTVIFNVTDLSLALKRDAGEVCKFFGAELGAQAREKGGTTRGTLDNTVDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKSKDKDK 147
            MP V GK+EG GNGIKTV+ N+TD+  +L R  GEV KFFG ELGAQ+R    T          +RAIVNGAHT+A LQ L++KYVE FVLCPNC LPE++YKIK+  I+HKC ACGAKEMVDMSH+LC YI+   KKAKK K K+K
Sbjct:   26 MPAVYGKIEGSGNGIKTVVPNITDVGTSLHRAPGEVNKFFGTELGAQSRYSAET----------DRAIVNGAHTDAVLQDLINKYVEKFVLCPNCGLPETEYKIKSEVIYHKCAACGAKEMVDMSHRLCNYILAEDKKAKKDKGKNK 162          
BLAST of mRNA_L-elsbetiae_contig5079.13111.1 vs. uniprot
Match: A0A7S1D9Q5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9Q5_CYCTE)

HSP 1 Score: 184 bits (466), Expect = 6.840e-54
Identity = 93/147 (63.27%), Postives = 112/147 (76.19%), Query Frame = 0
Query:    1 MPRVIGKVEGCGNGIKTVIFNVTDLSLALKRDAGEVCKFFGAELGAQAREKGGTTRGTLDNTVDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKK-SKDKD 146
            MP V GK+EG GNGIKTVI N++D+ L+L R+AGEV KFFG ELGAQ          T  N   +RA+VNGAHT+ TLQ L+H+Y+E FVLCPNC LPE++YKIKN  I+HKC ACG+K+MVDMSHKLCTYI+   KKAKK +K KD
Sbjct:   26 MPAVYGKIEGRGNGIKTVIPNISDVGLSLHREAGEVTKFFGTELGAQ----------TTYNPDTDRAVVNGAHTDDTLQDLMHRYIEKFVLCPNCSLPETEYKIKNDCIYHKCAACGSKDMVDMSHKLCTYILAQDKKAKKEAKSKD 162          
BLAST of mRNA_L-elsbetiae_contig5079.13111.1 vs. uniprot
Match: A0A1Z5JLW0_FISSO (Translation initiation factor 5 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JLW0_FISSO)

HSP 1 Score: 183 bits (464), Expect = 1.070e-53
Identity = 90/145 (62.07%), Postives = 109/145 (75.17%), Query Frame = 0
Query:    1 MPRVIGKVEGCGNGIKTVIFNVTDLSLALKRDAGEVCKFFGAELGAQAREKGGTTRGTLDNTVDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKSKDK 145
            MP V GK+EG GNGIKTV+ NV D++ +L R+ GEV KFFG E+GAQ+R    T          +RAIVNGAHT+ATLQ+L+H+Y+E FVLCP CRLPE+KYKIK+  I+H C ACGAK+MVDMSHKLC YI+   KKAKK K K
Sbjct:   26 MPAVFGKIEGSGNGIKTVLVNVLDVANSLHREPGEVSKFFGTEMGAQSRYSADT----------DRAIVNGAHTDATLQELMHRYIEKFVLCPTCRLPETKYKIKSDTIYHSCAACGAKDMVDMSHKLCNYILAENKKAKKDKGK 160          
BLAST of mRNA_L-elsbetiae_contig5079.13111.1 vs. uniprot
Match: B7G289_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G289_PHATC)

HSP 1 Score: 182 bits (462), Expect = 2.960e-53
Identity = 92/147 (62.59%), Postives = 107/147 (72.79%), Query Frame = 0
Query:    1 MPRVIGKVEGCGNGIKTVIFNVTDLSLALKRDAGEVCKFFGAELGAQAREKGGTTRGTLDNTVDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKSKDKDK 147
            MP V GK+EG GNGIKTVI N+T+++L+L R  GEV KFFG ELGAQ R    T          +RA+VNGAH +A LQ L+H+Y+E FVLCPNC LPE+ YKIKN AI+HKC ACGAKEMVDMSHKLC YI+   KKAKK   K K
Sbjct:   26 MPAVFGKIEGSGNGIKTVIPNITEVALSLHRQPGEVNKFFGTELGAQTRYSAET----------DRAVVNGAHMDAVLQDLMHRYIERFVLCPNCNLPETDYKIKNDAIWHKCAACGAKEMVDMSHKLCNYILAEDKKAKKDSKKSK 162          
BLAST of mRNA_L-elsbetiae_contig5079.13111.1 vs. uniprot
Match: A0A7S3V5E2_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V5E2_9STRA)

HSP 1 Score: 177 bits (450), Expect = 1.580e-51
Identity = 88/144 (61.11%), Postives = 107/144 (74.31%), Query Frame = 0
Query:    1 MPRVIGKVEGCGNGIKTVIFNVTDLSLALKRDAGEVCKFFGAELGAQAREKGGTTRGTLDNTVDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKSKD 144
            MP V+GK+EG GNGIKTVI NV DL+L+L RD GEV KFFG E+GAQ          T  N  D+RA+VNGAH++  LQ  VHKYVE FVLCPNC LPE++YKIK G I+H+C ACG+K+MVDM+HKLCTYI+   K+  K K+
Sbjct:   22 MPSVMGKIEGKGNGIKTVIVNVYDLALSLHRDPGEVNKFFGCEMGAQ----------TTYNETDDRAVVNGAHSDGELQGCVHKYVEKFVLCPNCGLPETEYKIKQGCIWHRCKACGSKDMVDMNHKLCTYILKKWKEDSKKKN 155          
BLAST of mRNA_L-elsbetiae_contig5079.13111.1 vs. uniprot
Match: A0A7S3LEE8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LEE8_9STRA)

HSP 1 Score: 176 bits (445), Expect = 9.400e-51
Identity = 86/141 (60.99%), Postives = 104/141 (73.76%), Query Frame = 0
Query:    1 MPRVIGKVEGCGNGIKTVIFNVTDLSLALKRDAGEVCKFFGAELGAQAREKGGTTRGTLDNTVDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKK 141
            MP V GK+EG GNGIKTVI N+TD+  +L R   EV KFFG ELGAQ R    T          +RAI+NGAHT+ATLQ+L+ +Y++ FVLCPNC LPE++YKIK+  +FHKC ACGAKEMVDMSHKLC +I+   KKAKK
Sbjct:   26 MPAVFGKIEGSGNGIKTVIPNITDVGTSLHRSPAEVNKFFGTELGAQTRYSAET----------DRAIINGAHTDATLQELIKRYIDKFVLCPNCNLPETEYKIKSDTVFHKCMACGAKEMVDMSHKLCNFILAENKKAKK 156          
BLAST of mRNA_L-elsbetiae_contig5079.13111.1 vs. uniprot
Match: A0A6V2MCK3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2MCK3_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.380e-50
Identity = 89/147 (60.54%), Postives = 110/147 (74.83%), Query Frame = 0
Query:    1 MPRVIGKVEGCGNGIKTVIFNVTDLSLALKRDAGEVCKFFGAELGAQAREKGGTTRGTLDNTVDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKK-SKDKD 146
            MP V GK+EG GNGIKTVI N+++++L+L R  GEV KFFG ELGAQ          T  N   +RA+VNGAHT++ LQ +VH+Y+E FVLCPNCRLPE+ YKIK+  I+HKC ACGAKEM++M HKLCTYI+   KKAKK +K KD
Sbjct:   25 MPTVYGKIEGRGNGIKTVIPNISEVALSLHRPPGEVNKFFGCELGAQ----------TTYNADTDRAVVNGAHTDSVLQNMVHRYIEGFVLCPNCRLPETDYKIKSDTIYHKCAACGAKEMLNMQHKLCTYILAQDKKAKKDAKSKD 161          
BLAST of mRNA_L-elsbetiae_contig5079.13111.1 vs. uniprot
Match: A0A7S2KDW7_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KDW7_9STRA)

HSP 1 Score: 173 bits (438), Expect = 6.900e-50
Identity = 88/140 (62.86%), Postives = 103/140 (73.57%), Query Frame = 0
Query:    1 MPRVIGKVEGCGNGIKTVIFNVTDLSLALKRDAGEVCKFFGAELGAQAREKGGTTRGTLDNTVDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPESKYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAK 140
            MP+V+GK+EG GNG KTVI N+++L+L+L RD GEV KFFG ELGAQ          T  +    RA+VNG HT+A LQQ VHKYVE FV+CPNC LPE+ YKIK+G I HKC ACGAKEMVDMSHKL  YI+   KKAK
Sbjct:   24 MPKVVGKLEGRGNGSKTVIVNISELALSLHRDPGEVNKFFGTELGAQ----------TTYSDETNRAVVNGHHTDAVLQQAVHKYVEAFVICPNCGLPETDYKIKSGVITHKCAACGAKEMVDMSHKLTNYILAQDKKAK 153          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5079.13111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRC0_ECTSI1.450e-7787.41W2 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
B8BW00_THAPS2.760e-5564.14W2 domain-containing protein n=1 Tax=Thalassiosira... [more]
A0A7S3DU57_9STRA3.140e-5562.59Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A7S1D9Q5_CYCTE6.840e-5463.27Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A1Z5JLW0_FISSO1.070e-5362.07Translation initiation factor 5 n=2 Tax=Fistulifer... [more]
B7G289_PHATC2.960e-5362.59Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S3V5E2_9STRA1.580e-5161.11Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S3LEE8_9STRA9.400e-5160.99Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A6V2MCK3_9STRA1.380e-5060.54Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2KDW7_9STRA6.900e-5062.86Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002735Translation initiation factor IF2/IF5SMARTSM00653eIF2Bneu4coord: 1..119
e-value: 1.6E-25
score: 100.8
IPR002735Translation initiation factor IF2/IF5PFAMPF01873eIF-5_eIF-2Bcoord: 1..119
e-value: 4.0E-24
score: 84.7
NoneNo IPR availableGENE3D2.20.25.350coord: 92..135
e-value: 3.7E-15
score: 57.3
NoneNo IPR availableGENE3D3.30.30.50coord: 5..91
e-value: 1.7E-19
score: 71.6
NoneNo IPR availablePANTHERPTHR23001:SF7EUKARYOTIC TRANSLATION INITIATION FACTOR 5coord: 1..147
NoneNo IPR availablePANTHERPTHR23001EUKARYOTIC TRANSLATION INITIATION FACTORcoord: 1..147
IPR016189Translation initiation factor IF2/IF5, N-terminalSUPERFAMILY100966Translation initiation factor 2 beta, aIF2beta, N-terminal domaincoord: 1..92
IPR016190Translation initiation factor IF2/IF5, zinc-bindingSUPERFAMILY75689Zinc-binding domain of translation initiation factor 2 betacoord: 89..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5079contigL-elsbetiae_contig5079:11146..12756 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5079.13111.1mRNA_L-elsbetiae_contig5079.13111.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5079 7568..12765 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5079.13111.1 ID=prot_L-elsbetiae_contig5079.13111.1|Name=mRNA_L-elsbetiae_contig5079.13111.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=150bp
MPRVIGKVEGCGNGIKTVIFNVTDLSLALKRDAGEVCKFFGAELGAQARE
KGGTTRGTLDNTVDERAIVNGAHTNATLQQLVHKYVELFVLCPNCRLPES
KYKIKNGAIFHKCYACGAKEMVDMSHKLCTYIVNTAKKAKKSKDKDKDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002735Transl_init_fac_IF2/IF5
IPR016189Transl_init_fac_IF2/IF5_N
IPR016190Transl_init_fac_IF2/IF5_Zn-bd