prot_L-elsbetiae_contig5076.13105.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5076.13105.1
Unique Nameprot_L-elsbetiae_contig5076.13105.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length255
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig5076.13105.1 vs. uniprot
Match: D7FPQ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPQ9_ECTSI)

HSP 1 Score: 296 bits (759), Expect = 7.750e-98
Identity = 161/261 (61.69%), Postives = 191/261 (73.18%), Query Frame = 0 
Query:    1 MYAFPDIPRDETRRVGRCSRVFREIYREVGS-----NV-RCNQPSTVQSRVLRWPGPGADPSELVPDAQEAKFFALGAQFIIIQALCKQDLRFKVFYDLTGSSGRAGFAAVGLQQWSKVVSLESSLGGHDTAVKARRLVLRVQPPIALTKPSAWTVEQTNFKKADWIDGDVVFFDGTLFENLDEGVLCRYFQGRLRALQAGSFVVLFTRCADRLLIGDGFRLIYSNTQKHKTADGRGRGRFTSWLFKTSMQSNDRRVGVPD 255
            MYAFPDIPRD+ RRV   S VFR++    GS     NV R  +P+  +   L     G +PS LVPD   AKFFALGAQF+I+Q LC QDLRFK FYDL GSSG+AG +A+ L++WS +VSLESS   +D A+ ARR + RV+ P ALTK  AWT+E T F KADWIDGDVVF DGT+F+ LDEGVL R FQ RL ALQAGSFVV+FT  +++LL GD F+LIYSNT ++ TADGR  GRFTSWLFKT M SND RVGVP+
Sbjct:    1 MYAFPDIPRDKARRVAHASTVFRDVLSAGGSIATQDNVSREKEPAEGEPTAL---DEGENPSGLVPDVLSAKFFALGAQFVILQNLCNQDLRFKKFYDLVGSSGKAGLSALLLERWSSIVSLESSKKNYDCAIMARRAMGRVETPGALTKTPAWTIEHTTFTKADWIDGDVVFLDGTVFKCLDEGVLFRRFQERLGALQAGSFVVVFTFSSEQLLSGD-FKLIYSNTHRYTTADGRAGGRFTSWLFKTLMHSNDHRVGVPE 257
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5076.13105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FPQ9_ECTSI7.750e-9861.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5076contigL-elsbetiae_contig5076:2505..5674 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5076.13105.1mRNA_L-elsbetiae_contig5076.13105.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5076 2505..5674 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5076.13105.1 ID=prot_L-elsbetiae_contig5076.13105.1|Name=mRNA_L-elsbetiae_contig5076.13105.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=255bp
MYAFPDIPRDETRRVGRCSRVFREIYREVGSNVRCNQPSTVQSRVLRWPG
PGADPSELVPDAQEAKFFALGAQFIIIQALCKQDLRFKVFYDLTGSSGRA
GFAAVGLQQWSKVVSLESSLGGHDTAVKARRLVLRVQPPIALTKPSAWTV
EQTNFKKADWIDGDVVFFDGTLFENLDEGVLCRYFQGRLRALQAGSFVVL
FTRCADRLLIGDGFRLIYSNTQKHKTADGRGRGRFTSWLFKTSMQSNDRR
VGVPD
back to top