prot_L-elsbetiae_contig5051.13079.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5051.13079.1
Unique Nameprot_L-elsbetiae_contig5051.13079.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length323
Homology
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BLAST of mRNA_L-elsbetiae_contig5051.13079.1 vs. uniprot
Match: D7FX10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX10_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 5.760e-45
Identity = 72/138 (52.17%), Postives = 100/138 (72.46%), Query Frame = 0 
Query:  185 PLPLGLGWVQLPLWNIACIAPFIVSLVWFRNDYVQQVQQDVTSFDIHAHGLMGFFTLVDQLLVADPFKLEHVVISQAYLVIFVVLSYFWSNWTPEEDKHLYEDILDWEGNAVQASIWTGVSVGILAPMAALVHFLVYR 322
            P+P GL W+QL LWNIACIA  +V+ VW   DYV+QV+Q   +FD+ AHGL+ FF LVDQLL+AD FKL H++ +Q Y ++++  S  W    PE++K+LYED LDW  N +QA +  GV+VG+L P+A L+H +V+R
Sbjct:   10 PVPRGLRWLQLVLWNIACIASLLVTFVWASEDYVRQVRQGTKNFDVQAHGLVAFFMLVDQLLIADTFKLGHMIFTQIYGLVYLAFSVIWFYKGPEDEKYLYEDTLDWGENRLQACLSGGVAVGVLVPIAGLLHLVVFR 147
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BLAST of mRNA_L-elsbetiae_contig5051.13079.1 vs. uniprot
Match: A0A6H5JVA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVA0_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 1.210e-43
Identity = 72/138 (52.17%), Postives = 101/138 (73.19%), Query Frame = 0 
Query:  185 PLPLGLGWVQLPLWNIACIAPFIVSLVWFRNDYVQQVQQDVTSFDIHAHGLMGFFTLVDQLLVADPFKLEHVVISQAYLVIFVVLSYFWSNWTPEEDKHLYEDILDWEGNAVQASIWTGVSVGILAPMAALVHFLVYR 322
            P+P GL W+QL LWNIACIA  +V+ VW   DYV+QV+Q V +FD+ AHGL+ FF LVDQLL+AD +KL H++ +Q Y ++++  S  W    PE++K+LYED LDW+ N +QA +  GV+VG+L P+A L+H  V+R
Sbjct:   92 PVPRGLRWLQLVLWNIACIASLLVTFVWATEDYVRQVRQGVKNFDVQAHGLVAFFMLVDQLLIADTYKLGHMIFTQIYGLVYLAFSVVWFYNGPEDEKYLYEDTLDWDENRLQACLSGGVAVGVLVPIAGLLHLGVFR 229
[Close]
BLAST of mRNA_L-elsbetiae_contig5051.13079.1 vs. uniprot
Match: A0A6H5JSI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI9_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 1.510e-14
Identity = 38/81 (46.91%), Postives = 51/81 (62.96%), Query Frame = 0 
Query:   32 GSITMGGIELRTGTSRFLVQGAFVLYKMVMAAYFIFWAIYWPTAGGLRTQAAKHLASWTWNVCTGYFIVSTVAALLCWRAM 112
            G++ +     R GTSRFL QG FVLYK+ +A YF++WAI+W       T   + L  WTW   T YF+VS ++A LCWRA+
Sbjct:    7 GTVPLDDETPRIGTSRFLPQGMFVLYKLGLAVYFLYWAIFWRAVKDYNT--GRFLTHWTWYATTTYFVVSALSAFLCWRAI 85
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5051.13079.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FX10_ECTSI5.760e-4552.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVA0_9PHAE1.210e-4352.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JSI9_9PHAE1.510e-1446.91Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039860Protein rolling stonePANTHERPTHR12242:SF1LD06593P-RELATEDcoord: 52..321
NoneNo IPR availablePANTHERPTHR12242UNCHARACTERIZEDcoord: 52..321
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 70..88
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..69
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 249..254
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 230..248
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..28
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 188..210
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 255..273
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..109
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 322..322
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 110..187
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 29..47
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 211..229
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 274..299
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 300..321
NoneNo IPR availableTMHMMTMhelixcoord: 85..107
NoneNo IPR availableTMHMMTMhelixcoord: 230..248
NoneNo IPR availableTMHMMTMhelixcoord: 255..277
NoneNo IPR availableTMHMMTMhelixcoord: 48..70
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 188..210
NoneNo IPR availableTMHMMTMhelixcoord: 299..321

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5051contigL-elsbetiae_contig5051:3815..11469 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5051.13079.1mRNA_L-elsbetiae_contig5051.13079.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5051 3815..11469 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5051.13079.1 ID=prot_L-elsbetiae_contig5051.13079.1|Name=mRNA_L-elsbetiae_contig5051.13079.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=323bp
SPSGAPPVVPPSVALLAGSLLLAPLVFCKRYGSITMGGIELRTGTSRFLV
QGAFVLYKMVMAAYFIFWAIYWPTAGGLRTQAAKHLASWTWNVCTGYFIV
STVAALLCWRAMKHNDGPAATASTPISGRGVKNAWPFFLGGGTRKKPPVV
QAPSPTTLSTRKATAASPRGSGSSLAQQKHGNNSPLPLGLGWVQLPLWNI
ACIAPFIVSLVWFRNDYVQQVQQDVTSFDIHAHGLMGFFTLVDQLLVADP
FKLEHVVISQAYLVIFVVLSYFWSNWTPEEDKHLYEDILDWEGNAVQASI
WTGVSVGILAPMAALVHFLVYR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039860Rost