prot_L-elsbetiae_contig5036.13059.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5036.13059.1
Unique Nameprot_L-elsbetiae_contig5036.13059.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length132
Homology
BLAST of mRNA_L-elsbetiae_contig5036.13059.1 vs. uniprot
Match: D8LFS3_ECTSI (Cytochrome c oxidase subunit Vb n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFS3_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 1.180e-71
Identity = 112/132 (84.85%), Postives = 117/132 (88.64%), Query Frame = 0
Query:    1 MFSTVARRAGVVARAAAMRPQP-AAAAPALRACAFPQAARFSDNVGDGGIPDTHDTGRQREEREVAGFNREPIHPPKGSGTKAMPFEVPSEHKERVVGFEHPESHAMYWFPLSAGKLHYVEEIDRYFKLVPL 131
            MFSTVAR  GV ARAAA+RPQP AAAA    A A PQ ARFSD VGDGGIPDTHDTGRQ+ ERE  GFNR+PIHPPKGSGTKAMPFEVPSEH+ERVVGFEHPESHAMYWFPL+AGKLHYVEEIDRYFKLVPL
Sbjct:    1 MFSTVARHVGVAARAAALRPQPTAAAAWRASAAALPQVARFSDGVGDGGIPDTHDTGRQKTEREGVGFNRDPIHPPKGSGTKAMPFEVPSEHQERVVGFEHPESHAMYWFPLAAGKLHYVEEIDRYFKLVPL 132          
BLAST of mRNA_L-elsbetiae_contig5036.13059.1 vs. uniprot
Match: A0A6U3QRH7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3QRH7_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 6.200e-21
Identity = 45/83 (54.22%), Postives = 56/83 (67.47%), Query Frame = 0
Query:   53 HDTGRQREERE-----VAGFNREPIHPPKGSGTKAMPFEVPSEHKERVVGFEHPESHAMYWFPLSAGKLHYVEEIDRYFKLVP 130
            H  GR+ +E E     +  FNR+PI PP G+GTK  P +VPS + ERVVGFE P  H + WF ++AGKLHYV  ID+YF LVP
Sbjct:   45 HQGGRRLQEIEDEKLGLVTFNRDPIMPPVGAGTKENPIQVPSGYDERVVGFEDPTVHQLQWFTMTAGKLHYVSSIDKYFTLVP 127          
BLAST of mRNA_L-elsbetiae_contig5036.13059.1 vs. uniprot
Match: A0A7S1XX62_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XX62_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 4.350e-20
Identity = 60/125 (48.00%), Postives = 77/125 (61.60%), Query Frame = 0
Query:   11 VVARAAAMRPQPAAAAPALRACAFPQAARFSDNVGDGGIPDTHDT--GRQREE--REVAG---FNREPIHPPKGSGTKAMPFEVPSEHKERVVGFEHPESHAMYWFPLSAGKLHYVEEIDRYFKL 128
            ++ARA     +P AAA A RA   P  A   ++  DG IPD  D   GR++ E   E +G   FNR+PI PP G+GTK  P  VPSE KERVVGFE P++H + WF L A   +Y+E +D+YFKL
Sbjct:    1 MLARALRTSMRPLAAAAARRAPMAPVRALAIES--DGLIPDIEDQVFGRRKMELDAEKSGDLLFNRDPIVPPVGAGTKENPILVPSEFKERVVGFEDPDTHQIAWFCLQADATYYIESVDKYFKL 123          
BLAST of mRNA_L-elsbetiae_contig5036.13059.1 vs. uniprot
Match: A0A835ZBD2_9STRA (Cytochrome c oxidase subunit VB n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBD2_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 8.800e-18
Identity = 40/74 (54.05%), Postives = 50/74 (67.57%), Query Frame = 0
Query:   55 TGRQREEREVAGFNREPIHPPKGSGTKAMPFEVPSEHKERVVGFEHPESHAMYWFPLSAGKLHYVEEIDRYFKL 128
            TG++ EE     FN + + PP GSGT+  P EVPS    R VG+E PE+HA+YWF L AGK+H+V  ID YFKL
Sbjct:   52 TGQRGEEVRGTFFNDQALMPPAGSGTREKPIEVPSRLDMRTVGYEDPETHAIYWFNLKAGKVHHVTPIDMYFKL 125          
BLAST of mRNA_L-elsbetiae_contig5036.13059.1 vs. uniprot
Match: A0A6U1NDJ1_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1NDJ1_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 5.190e-16
Identity = 40/72 (55.56%), Postives = 48/72 (66.67%), Query Frame = 0
Query:   58 QREEREVAGFNREPIHPPKGSGTKAMPFEVPSEHKERVVGFEHPESHAMYWFPLSAGKLHYVEEIDRYFKLV 129
            Q  ++EVA + R+P+ P  G GT A P  VPS  KER VGFE P SH M WF L  G +H+VEEID YFKL+
Sbjct:   53 QEAKKEVA-YVRDPVIPEPGQGTLANPILVPSAMKERAVGFEDPLSHQMQWFVLQEGDIHWVEEIDMYFKLI 123          
BLAST of mRNA_L-elsbetiae_contig5036.13059.1 vs. uniprot
Match: A0A4D9DB47_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DB47_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 6.510e-11
Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 0
Query:   67 FNREPIHPPKGSGTKAMPFEVPSEHKERVVGFEHPESHAMYWFPLSAGKLHYVEEIDRYFKL 128
            FNR+P+      GTK+ P  VPS   ER+VG+E P  H ++WF L  G L YV +ID+YF L
Sbjct:   93 FNRDPVFALPDQGTKSNPVLVPSGENERIVGYEDPHVHQVFWFKLRKGDLVYVPKIDKYFSL 154          
BLAST of mRNA_L-elsbetiae_contig5036.13059.1 vs. uniprot
Match: A0A1E7FE28_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FE28_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.000e-10
Identity = 27/73 (36.99%), Postives = 49/73 (67.12%), Query Frame = 0
Query:   60 EEREVAGFNREPIHPPKGSGTKAMPFEVPSEHKERVVGFEHPESHAMYWFPL-SAGKLHYVEEIDRYFKLVPL 131
            E++ + G+N   + PP+G+GT   P  +PS    RVVG++ P+SHAM+WF + S    +Y++++  +FK++P+
Sbjct:  100 EQKNIEGYNDLGLVPPEGTGTFTSPILIPSRRTSRVVGYQDPDSHAMFWFTIHSDNSSYYIKDLGLFFKMLPI 172          
BLAST of mRNA_L-elsbetiae_contig5036.13059.1 vs. uniprot
Match: W7TKL4_9STRA (Cytochrome c oxidase subunit vb n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TKL4_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.910e-10
Identity = 30/62 (48.39%), Postives = 39/62 (62.90%), Query Frame = 0
Query:   67 FNREPIHPPKGSGTKAMPFEVPSEHKERVVGFEHPESHAMYWFPLSAGKLHYVEEIDRYFKL 128
            FNR+P+      GTK+ P  VPS   ER+VG+E P  H ++WF L  G L YV +ID+YF L
Sbjct:  195 FNRDPVFALPDQGTKSNPVLVPSGENERIVGYEDPHVHQVFWFKLRKGDLVYVPKIDKYFSL 256          
BLAST of mRNA_L-elsbetiae_contig5036.13059.1 vs. uniprot
Match: A0A024FVF4_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024FVF4_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 3.260e-10
Identity = 38/88 (43.18%), Postives = 52/88 (59.09%), Query Frame = 0
Query:   49 IPDTHD--TGRQREERE-----VAGFNREPIHPPKGSG-TKAMPFEVPSEHKERVVGFEHPESHAMYWFPLSAGKLHYVEEIDRYFKL 128
            IPD +D   GRQREE E     +  FNR+PI   +  G +K  P  VPS +  R +G  H +S  ++WF L  GK+ YV +I++YFKL
Sbjct:   27 IPDIYDHAVGRQREELEDEKAGIITFNRDPIETDETQGNSKEDPILVPSFNDVRPIGVSHNDSSYVFWFNLQKGKIFYVPQIEKYFKL 114          
BLAST of mRNA_L-elsbetiae_contig5036.13059.1 vs. uniprot
Match: A0A485KGU5_9STRA (Aste57867_13701 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KGU5_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 7.640e-9
Identity = 34/79 (43.04%), Postives = 46/79 (58.23%), Query Frame = 0
Query:   56 GRQREEREVAG-----FNREPIHPPKGSG-TKAMPFEVPSEHKERVVGFEHPESHAMYWFPLSAGKLHYVEEIDRYFKL 128
            GRQ EE  +A      FNR+P+   +  G +K  P  VPS + +R VG  H +S  + WF L  GK+HYV + D+YFKL
Sbjct:   34 GRQGEELHLAEEGIELFNRDPVSSEEHQGNSKDDPILVPSFNSQRAVGISHNDSPYIVWFNLDEGKVHYVPQFDKYFKL 112          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5036.13059.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LFS3_ECTSI1.180e-7184.85Cytochrome c oxidase subunit Vb n=2 Tax=Ectocarpus... [more]
A0A6U3QRH7_9STRA6.200e-2154.22Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1XX62_9STRA4.350e-2048.00Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A835ZBD2_9STRA8.800e-1854.05Cytochrome c oxidase subunit VB n=1 Tax=Tribonema ... [more]
A0A6U1NDJ1_9STRA5.190e-1655.56Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A4D9DB47_9STRA6.510e-1148.39Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A1E7FE28_9STRA1.000e-1036.99Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
W7TKL4_9STRA2.910e-1048.39Cytochrome c oxidase subunit vb n=1 Tax=Nannochlor... [more]
A0A024FVF4_9STRA3.260e-1043.18Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A485KGU5_9STRA7.640e-943.04Aste57867_13701 protein n=1 Tax=Aphanomyces stella... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036972Cytochrome c oxidase, subunit Vb superfamilyGENE3D2.60.11.10coord: 45..131
e-value: 1.9E-9
score: 39.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..17
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..131
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePRODOMPD007270coord: 55..128
e-value: 0.005
score: 88.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5036contigL-elsbetiae_contig5036:5665..6060 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5036.13059.1mRNA_L-elsbetiae_contig5036.13059.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5036 5135..13240 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5036.13059.1 ID=prot_L-elsbetiae_contig5036.13059.1|Name=mRNA_L-elsbetiae_contig5036.13059.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=132bp
MFSTVARRAGVVARAAAMRPQPAAAAPALRACAFPQAARFSDNVGDGGIP
DTHDTGRQREEREVAGFNREPIHPPKGSGTKAMPFEVPSEHKERVVGFEH
PESHAMYWFPLSAGKLHYVEEIDRYFKLVPL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036972Cyt_c_oxidase_su5b_sf