prot_L-elsbetiae_contig503.13047.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig503.13047.1
Unique Nameprot_L-elsbetiae_contig503.13047.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length42
Homology
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Match: A0A2E9XPS3_9RICK (Cytochrome-c oxidase n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E9XPS3_9RICK)

HSP 1 Score: 72.8 bits (177), Expect = 4.210e-14
Identity = 31/40 (77.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 MTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECA 40
            M TGLHG HVLIGTIFL+VC FRH S HFT +HH+GFECA
Sbjct:  229 MATGLHGFHVLIGTIFLLVCFFRHLSFHFTRSHHIGFECA 268          
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Match: A0A2E2JQQ4_9RHOB (Cytochrome-c oxidase n=1 Tax=Rhodovulum sp. TaxID=34009 RepID=A0A2E2JQQ4_9RHOB)

HSP 1 Score: 69.7 bits (169), Expect = 4.940e-13
Identity = 30/39 (76.92%), Postives = 33/39 (84.62%), Query Frame = 0
Query:    2 TTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECA 40
            TTGLHG HV IGT+FLIVCLFRH   HFTP+HHVG+E A
Sbjct:  215 TTGLHGFHVFIGTVFLIVCLFRHLLGHFTPSHHVGYEAA 253          
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Match: A0A5B9IT22_9STRA (Cytochrome c oxidase subunit 3 n=1 Tax=Cafileria marina TaxID=2557541 RepID=A0A5B9IT22_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 2.910e-12
Identity = 29/40 (72.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query:    1 MTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECA 40
            MTTGLHG+HVLIG++FLIVCL R  +HHFT  HH+GFE A
Sbjct:  202 MTTGLHGTHVLIGSLFLIVCLIRLINHHFTKKHHIGFESA 241          
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Match: A0A0N7ARY2_9ORTH (Cytochrome c oxidase subunit 3 n=1 Tax=Pseudothericles compressifrons TaxID=1564105 RepID=A0A0N7ARY2_9ORTH)

HSP 1 Score: 67.0 bits (162), Expect = 3.090e-12
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    1 MTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECAS 41
            M TG HG HV+IGT FL++CL RH+S+HF+PTHH GFE A+
Sbjct:  178 MATGFHGIHVIIGTSFLLMCLIRHYSNHFSPTHHFGFEAAA 218          
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Match: A0A4R6WSF7_9PROT (Cytochrome-c oxidase n=1 Tax=Dongia mobilis TaxID=578943 RepID=A0A4R6WSF7_9PROT)

HSP 1 Score: 67.0 bits (162), Expect = 4.420e-12
Identity = 29/41 (70.73%), Postives = 32/41 (78.05%), Query Frame = 0
Query:    1 MTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECAS 41
            M TG HG HVL+GT+FLIVCLFR F  HFTP HH GFE A+
Sbjct:  206 MATGFHGFHVLVGTLFLIVCLFRGFKGHFTPDHHFGFEAAA 246          
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Match: A0A160UPG9_9BRAD (Cytochrome-c oxidase n=3 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=A0A160UPG9_9BRAD)

HSP 1 Score: 65.5 bits (158), Expect = 4.510e-12
Identity = 28/41 (68.29%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    1 MTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECAS 41
            M TG HG HVL+GTIFL+VCLFR ++ HFTPT H+GFE A+
Sbjct:  102 MATGFHGFHVLVGTIFLLVCLFRAYAGHFTPTQHLGFEFAA 142          
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Match: A0A6G7GC60_9DIPT (Cytochrome c oxidase subunit 3 n=1 Tax=Trichosia lengersdorfi TaxID=1884860 RepID=A0A6G7GC60_9DIPT)

HSP 1 Score: 66.6 bits (161), Expect = 5.490e-12
Identity = 27/41 (65.85%), Postives = 34/41 (82.93%), Query Frame = 0
Query:    1 MTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECAS 41
            +TTG HG HVLIGT+FLI+CL RH ++HF+ THH GFE A+
Sbjct:  200 LTTGFHGLHVLIGTLFLIICLLRHINYHFSKTHHFGFEAAA 240          
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Match: A0A0H3UL21_9COLE (Cytochrome c oxidase subunit 3 n=1 Tax=Teslasena femoralis TaxID=1622175 RepID=A0A0H3UL21_9COLE)

HSP 1 Score: 66.2 bits (160), Expect = 7.490e-12
Identity = 27/41 (65.85%), Postives = 33/41 (80.49%), Query Frame = 0
Query:    1 MTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECAS 41
            M TG HG HV+IGT+FL VCL RH+ +HF+PTHH GFE A+
Sbjct:  199 MATGFHGLHVIIGTLFLTVCLIRHYLNHFSPTHHFGFEAAA 239          
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Match: B7SMJ7_9HEMI (Cytochrome c oxidase subunit 3 n=1 Tax=Phaenacantha marcida TaxID=498930 RepID=B7SMJ7_9HEMI)

HSP 1 Score: 66.2 bits (160), Expect = 7.490e-12
Identity = 29/40 (72.50%), Postives = 32/40 (80.00%), Query Frame = 0
Query:    1 MTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECA 40
            MTTG HG HV+IGTIFL+VCL RH   HF+ THHVGFE A
Sbjct:  199 MTTGFHGIHVIIGTIFLLVCLIRHMKCHFSKTHHVGFESA 238          
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Match: A0A0H4T3F2_9DIPT (Cytochrome c oxidase subunit 3 n=12 Tax=Diptera TaxID=7147 RepID=A0A0H4T3F2_9DIPT)

HSP 1 Score: 66.2 bits (160), Expect = 7.560e-12
Identity = 28/41 (68.29%), Postives = 31/41 (75.61%), Query Frame = 0
Query:    1 MTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECAS 41
            M TG HG HVLIGT FL+VCL RH  HHF+ THH GFE A+
Sbjct:  200 MATGFHGFHVLIGTTFLLVCLIRHMKHHFSKTHHFGFEAAA 240          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig503.13047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E9XPS3_9RICK4.210e-1477.50Cytochrome-c oxidase n=1 Tax=Rickettsiales bacteri... [more]
A0A2E2JQQ4_9RHOB4.940e-1376.92Cytochrome-c oxidase n=1 Tax=Rhodovulum sp. TaxID=... [more]
A0A5B9IT22_9STRA2.910e-1272.50Cytochrome c oxidase subunit 3 n=1 Tax=Cafileria m... [more]
A0A0N7ARY2_9ORTH3.090e-1265.85Cytochrome c oxidase subunit 3 n=1 Tax=Pseudotheri... [more]
A0A4R6WSF7_9PROT4.420e-1270.73Cytochrome-c oxidase n=1 Tax=Dongia mobilis TaxID=... [more]
A0A160UPG9_9BRAD4.510e-1268.29Cytochrome-c oxidase n=3 Tax=unclassified Bradyrhi... [more]
A0A6G7GC60_9DIPT5.490e-1265.85Cytochrome c oxidase subunit 3 n=1 Tax=Trichosia l... [more]
A0A0H3UL21_9COLE7.490e-1265.85Cytochrome c oxidase subunit 3 n=1 Tax=Teslasena f... [more]
B7SMJ7_9HEMI7.490e-1272.50Cytochrome c oxidase subunit 3 n=1 Tax=Phaenacanth... [more]
A0A0H4T3F2_9DIPT7.560e-1268.29Cytochrome c oxidase subunit 3 n=12 Tax=Diptera Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000298Cytochrome c oxidase subunit III-likePFAMPF00510COX3coord: 1..40
e-value: 1.2E-12
score: 48.2
IPR000298Cytochrome c oxidase subunit III-likePROSITEPS50253COX3coord: 1..41
score: 9.632
IPR013833Cytochrome c oxidase, subunit III, 4-helical bundleGENE3D1.20.120.80coord: 1..41
e-value: 1.0E-10
score: 43.5
IPR024791Cytochrome c oxidase subunit IIIPANTHERPTHR11403CYTOCHROME C OXIDASE SUBUNIT IIIcoord: 1..40
NoneNo IPR availablePANTHERPTHR11403:SF7CYTOCHROME C OXIDASE SUBUNIT 3coord: 1..40
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..41
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR035973Cytochrome c oxidase subunit III-like superfamilySUPERFAMILY81452Cytochrome c oxidase subunit III-likecoord: 1..41

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig503contigL-elsbetiae_contig503:19109..19234 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig503.13047.1mRNA_L-elsbetiae_contig503.13047.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig503 18689..19234 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig503.13047.1 ID=prot_L-elsbetiae_contig503.13047.1|Name=mRNA_L-elsbetiae_contig503.13047.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=42bp
MTTGLHGSHVLIGTIFLIVCLFRHFSHHFTPTHHVGFECAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000298Cyt_c_oxidase-like_su3
IPR013833Cyt_c_oxidase_su3_a-hlx
IPR024791Cyt_c/ubiquinol_Oxase_su3
IPR035973Cyt_c_oxidase_su3-like_sf