prot_L-elsbetiae_contig5027.13043.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5027.13043.1
Unique Nameprot_L-elsbetiae_contig5027.13043.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length149
Homology
BLAST of mRNA_L-elsbetiae_contig5027.13043.1 vs. uniprot
Match: A0A6H5K7R2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7R2_9PHAE)

HSP 1 Score: 71.6 bits (174), Expect = 9.790e-12
Identity = 56/148 (37.84%), Postives = 68/148 (45.95%), Query Frame = 0
Query:    1 IPGIPSGDGTVCCDSACGQCGGSGCFHFSGGPG-NCCIGGSKGILENADLCSSTGTAPCRIDGDGPPSIPAPSPEESGPSAETCPGDIPGIASGDGTACCDSAC-GKCGGFMCQALPG--GPGKCCIGGLKGILENADPCSSTGAAPC 144
            I GI      +CCD+ACG CGG GC + +G  G +CC   S+ I    DLCS T  APC +D   PP             A TCP  + G+   DG+ CC   C G CGG  C ++ G  G   CC      IL     C     APC
Sbjct:  181 IVGIEDPVNLICCDAACGLCGGPGCGNVTGLTGLDCC---SEEIAVVNDLCSVTNEAPCVMD---PPDF----------VASTCPNGLAGVQ--DGSVCCAEECNGVCGGEGCGSIVGTNGAEDCCS---NTILATGVDCEEGVMAPC 307          
BLAST of mRNA_L-elsbetiae_contig5027.13043.1 vs. uniprot
Match: D8LSQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSQ5_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 2.140e-7
Identity = 32/59 (54.24%), Postives = 36/59 (61.02%), Query Frame = 0
Query:    8 DGTVCCDSACGQCGGSGCFHFSGGPG-NCCIGGSKGILENADLCSSTGTAPCRID-GDG 64
            +G VCC + CGQCGG GC    G    NCCI    G+L N +LCS  G APC ID GDG
Sbjct:   57 NGVVCCTAECGQCGGEGCGSVPGLDNTNCCI---NGVLNNQELCSVAGAAPCVIDSGDG 112          
BLAST of mRNA_L-elsbetiae_contig5027.13043.1 vs. uniprot
Match: A0A6H5J9S1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9S1_9PHAE)

HSP 1 Score: 58.2 bits (139), Expect = 5.240e-7
Identity = 29/54 (53.70%), Postives = 33/54 (61.11%), Query Frame = 0
Query:    9 GTVCCDSACGQCGGSGCFHFSGGPG-NCCIGGSKGILENADLCSSTGTAPCRID 61
            G VCC + CGQCGG GC    G    NCCI    G+L+N +LCS  G APC ID
Sbjct:   11 GAVCCTAECGQCGGEGCGSVPGLDNTNCCI---NGVLDNQELCSVVGAAPCVID 61          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5027.13043.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K7R2_9PHAE9.790e-1237.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSQ5_ECTSI2.140e-754.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J9S1_9PHAE5.240e-753.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5027contigL-elsbetiae_contig5027:9855..11257 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5027.13043.1mRNA_L-elsbetiae_contig5027.13043.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5027 9276..11257 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5027.13043.1 ID=prot_L-elsbetiae_contig5027.13043.1|Name=mRNA_L-elsbetiae_contig5027.13043.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=149bp
IPGIPSGDGTVCCDSACGQCGGSGCFHFSGGPGNCCIGGSKGILENADLC
SSTGTAPCRIDGDGPPSIPAPSPEESGPSAETCPGDIPGIASGDGTACCD
SACGKCGGFMCQALPGGPGKCCIGGLKGILENADPCSSTGAAPCRIDA*
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