prot_L-elsbetiae_contig5007.13015.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5007.13015.1
Unique Nameprot_L-elsbetiae_contig5007.13015.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length157
Homology
BLAST of mRNA_L-elsbetiae_contig5007.13015.1 vs. uniprot
Match: D7G2Y5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Y5_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 8.830e-30
Identity = 67/122 (54.92%), Postives = 82/122 (67.21%), Query Frame = 0
Query:   30 MLPLRTAAAAALMLSSSVHGQSSSGPFLTCQDLQDAFELTKTQDVELIVDPRQDIVCDTFTTMSMDSNTLTVIPSSEQCEFCSGSVELHEIRFEITGGGKLFWQPRAAFIGTALQDVDGGAV 151
            M+PL   +AAAL+L   V G    G   TCQDL DAF LT +QDV + + P QDI CD+FTTMSM +N+LTV+    Q    SGSV L+E+RFE+T G KL W P A+F GT  QDV+GGAV
Sbjct:    1 MVPLSKISAAALLL---VSGSVCQGQLETCQDLLDAFALTASQDVVVEIQPGQDITCDSFTTMSMSANSLTVMTPDGQ----SGSVGLNEVRFEVTDGAKLLWYPGASFTGTEYQDVNGGAV 115          
BLAST of mRNA_L-elsbetiae_contig5007.13015.1 vs. uniprot
Match: A0A6H5JCE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE5_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 2.010e-16
Identity = 52/118 (44.07%), Postives = 69/118 (58.47%), Query Frame = 0
Query:   36 AAAAALMLSSSVHGQSSSGPFLTCQDLQDAFELTKTQDVELIVDPRQDIVCDTFTTMSMDSNTLTVIPSSEQCEFCSGSVELHEIRFEITGGGKLFWQPRAAFIGTALQD--VDGGAV 151
            ++ A L++  + HG        TC DL  AFE T+T+DV + + P  DI C+TFT M+M SN+LTV  SSE  +  SGS  L  +R ++T G KLFW+    F G    D  VDGGAV
Sbjct:   88 SSLALLLIPGACHGL-----IETCDDLLAAFEQTQTEDVVVEMHPFADIECETFTNMTMTSNSLTV-SSSENIDNFSGSSSLVNVRLDVTNGAKLFWETNVIFEGDEETDLMVDGGAV 199          
BLAST of mRNA_L-elsbetiae_contig5007.13015.1 vs. uniprot
Match: D7FGT1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGT1_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 6.160e-16
Identity = 48/96 (50.00%), Postives = 60/96 (62.50%), Query Frame = 0
Query:   58 TCQDLQDAFELTKTQDVELIVDPRQDIVCDTFTTMSMDSNTLTVIPSSEQCEFCSGSVELHEIRFEITGGGKLFWQPRAAFIGTALQD--VDGGAV 151
            TC+DLQ AF LT+TQDV   + P QDI C+TFT M+M SNTLT + SSE  +   GS  L  +R  +T G +L W+    FIG    +  VDGGAV
Sbjct:   24 TCEDLQAAFNLTQTQDVIDEIHPFQDIECETFTNMTMTSNTLT-LNSSENLDNFFGSSSLTNVRLVVTNGAELIWETHVNFIGDEEVELMVDGGAV 118          
BLAST of mRNA_L-elsbetiae_contig5007.13015.1 vs. uniprot
Match: D7G1Q9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Q9_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 5.830e-6
Identity = 41/118 (34.75%), Postives = 53/118 (44.92%), Query Frame = 0
Query:   36 AAAAALMLSSSVHGQSSSGPFLTCQDLQDAFELTKTQDVELIVDPRQDIVCDTFTTMSMDSNTLTVIPSSEQCEFCSGSVELHEIRFEITGGGKLFWQPRAAFIGTALQD--VDGGAV 151
            ++ A L++  + HG        TC DL  AFE T+T+DV + + P  DI CDTFT M+M SNTLT                             LFW+    F G    +  VDGGAV
Sbjct:    7 SSLALLLMPGTCHGL-----IETCDDLLAAFEQTQTEDVVVEMHPFADIECDTFTNMTMTSNTLT-----------------------------LFWETNVIFEGDEEAELMVDGGAV 90          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5007.13015.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G2Y5_ECTSI8.830e-3054.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCE5_9PHAE2.010e-1644.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FGT1_ECTSI6.160e-1650.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1Q9_ECTSI5.830e-634.75Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5007contigL-elsbetiae_contig5007:7686..12945 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5007.13015.1mRNA_L-elsbetiae_contig5007.13015.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5007 7686..12945 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5007.13015.1 ID=prot_L-elsbetiae_contig5007.13015.1|Name=mRNA_L-elsbetiae_contig5007.13015.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=157bp
TINPLSHRRRHQGQASLPTEKAHKNPDLKMLPLRTAAAAALMLSSSVHGQ
SSSGPFLTCQDLQDAFELTKTQDVELIVDPRQDIVCDTFTTMSMDSNTLT
VIPSSEQCEFCSGSVELHEIRFEITGGGKLFWQPRAAFIGTALQDVDGGA
VRFFVY*
back to top