prot_L-elsbetiae_contig5003.13007.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5003.13007.1
Unique Nameprot_L-elsbetiae_contig5003.13007.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length360
Homology
BLAST of mRNA_L-elsbetiae_contig5003.13007.1 vs. uniprot
Match: D7FS85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS85_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 9.190e-42
Identity = 154/312 (49.36%), Postives = 178/312 (57.05%), Query Frame = 0
Query:    1 DAESLLARLAGKAKQAAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVA-TGSLADVA-----GGPGDYAGAAVGSSETGEG-------GGGGRREPGLAAVEAG---GGRARLAELCKEDKAKVARLMQDLVKLRAEKDGQGARFERLRAQNESIVKEMAALKVKFGQSMQLLRKYQSIMQEGGPAAGRRPGVGGPDGAQGAGS-----RSVESLSXXXXXXXX-----DTKALREALRVAEEASRAXXXXXXXEHAGRVAMAEELRRAKEQADDLRRQLNHRVRA-GKPLLVAAPEDDARPGLDSLGG 285
            DAE+LLARLAGKAKQAAA A                              A   S+ D        G   + GAA+    TGE           GR+ P +AA   G    G ARLAELCKEDK KVARLMQDLVKLR EK+GQ  RFERLRAQNESIVK+MA LK KFGQSMQLLRKYQSI+QEGG A       GG  G +G G      + +E   XXXXXXXX     + +ALRE LR+AEE++R        + +GR AMAEELR+A+ QAD+LRRQL+H  R   +   VAA E   R  L  LGG
Sbjct:  123 DAEALLARLAGKAKQAAAVALSASAASGGMTPDLTARSAPTGTVTRNVKSAGVESITDATVRVRFSGDKGHLGAAIKRGTTGEDCRDESTVTAVGRQVPEVAAAAGGVAVDGGARLAELCKEDKTKVARLMQDLVKLRQEKEGQKTRFERLRAQNESIVKQMAGLKDKFGQSMQLLRKYQSIVQEGGAAD-----EGGGVGVRGKGXXXXXXKRLEKXXXXXXXXXXXXXXAEIQALRETLRLAEESTRKAEAEAAAQRSGRTAMAEELRQARGQADELRRQLDHHRRLQARDSPVAAREGPRRNDLGLLGG 429          
BLAST of mRNA_L-elsbetiae_contig5003.13007.1 vs. uniprot
Match: A0A6H5K9R0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9R0_9PHAE)

HSP 1 Score: 161 bits (408), Expect = 3.740e-40
Identity = 137/280 (48.93%), Postives = 157/280 (56.07%), Query Frame = 0
Query:    1 DAESLLARLAGKAKQAAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVA-TGSLADVA-----GGPGDYAGAAVGSSETGE-------GGGGGRREPGLAAVEAG---GGRARLAELCKEDKAKVARLMQDLVKLRAEKDGQGARFERLRAQNESIVKEMAALKVKFGQSMQLLRKYQSIMQEGG-PAAGRRPGVGGPDGAQGAGSRSVESLSXXXXXXXXDTKALREALRVAE-EASRAXXXXXXXEHAGRVAMAEELRRAKEQADDLRRQLNHRVR 262
            DAE+LLARLAGKAKQAAA A                              A   S+ D A      G   + GAA+  S TGE           GR+ P +AA   G    G ARLAELC+EDK KVARLMQDLVKLR EK+GQ  RFERLRAQNESIVKEMA LKVKFGQSMQLLRKYQSI+QEGG P  G   GV G     GA  R +E           + +ALRE       E++R        + + R AMAEELR+A+ QAD+LRRQL+H  R
Sbjct:  212 DAEALLARLAGKAKQAAAVALSASAASGGMTPDPTARAAPTGIVTRNVKSAGVESITDAAVRVRFSGDTGHVGAAIRRSTTGEECRDESMATAVGRQVPEVAAAAGGVAIDGGARLAELCQEDKTKVARLMQDLVKLRQEKEGQKTRFERLRAQNESIVKEMAGLKVKFGQSMQLLRKYQSIVQEGGAPGGGXXVGVRGKXXXXGACKR-LEKQEAAATAAAAEIQALREXPSAKRRESARKAEAEAAVQRSDRTAMAEELRQARGQADELRRQLDHHRR 490          
BLAST of mRNA_L-elsbetiae_contig5003.13007.1 vs. uniprot
Match: A0A835Z7B7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7B7_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 6.670e-7
Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 0
Query:   96 GRARLAELCKEDKAKVARLMQDLVKLRAEKDGQGARFERLRAQNESIVKEMAALKVKFGQSMQLLRKYQ---SIMQE 169
            G ARL +LC  DKAKVA+LMQ+L   +AE   +  R ERLRAQN  IV E A  + +  Q++ LL+KYQ   S++Q+
Sbjct:   42 GEARLVDLCPSDKAKVAKLMQELSAAQAEAAARAHRLERLRAQNAEIVAETADTRSRLTQAVLLLKKYQARASLLQQ 118          
BLAST of mRNA_L-elsbetiae_contig5003.13007.1 vs. uniprot
Match: A0A7S2SSJ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SSJ5_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 5.860e-5
Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = 0
Query:   98 ARLAELCKEDKAKVARLMQDLVKLRAEKDGQ-----------GARFERLRAQNESIVKEMAALKVKFGQSMQLLRKYQ 164
            ARL +LC  DK++VARL+  L+++  E D              +R +RLR QN+ IV EMAAL+ KFGQ++ L ++YQ
Sbjct:   56 ARLTDLCAADKSRVARLIDQLLRVTTEHDKAVEDWGRERATFESRIQRLRKQNDEIVGEMAALRKKFGQTLTLAQQYQ 133          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5003.13007.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FS85_ECTSI9.190e-4249.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9R0_9PHAE3.740e-4048.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z7B7_9STRA6.670e-749.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SSJ5_9STRA5.860e-543.59Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 236..263
NoneNo IPR availableCOILSCoilCoilcoord: 104..124
NoneNo IPR availableCOILSCoilCoilcoord: 132..152

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5003contigL-elsbetiae_contig5003:3906..6375 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5003.13007.1mRNA_L-elsbetiae_contig5003.13007.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5003 3906..6377 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5003.13007.1 ID=prot_L-elsbetiae_contig5003.13007.1|Name=mRNA_L-elsbetiae_contig5003.13007.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=360bp
DAESLLARLAGKAKQAAAAALSASAAASGAERAGPAAARRPERAAAATAV
ATGSLADVAGGPGDYAGAAVGSSETGEGGGGGRREPGLAAVEAGGGRARL
AELCKEDKAKVARLMQDLVKLRAEKDGQGARFERLRAQNESIVKEMAALK
VKFGQSMQLLRKYQSIMQEGGPAAGRRPGVGGPDGAQGAGSRSVESLSAA
AAAAAADTKALREALRVAEEASRAAKAAAAAEHAGRVAMAEELRRAKEQA
DDLRRQLNHRVRAGKPLLVAAPEDDARPGLDSLGGAALARSAEQAPAATA
SGKTTPLAAARGETAAAARRKVLPSTSTAGKGDARPERPHSQAALAGVSG
HCRATSGGGR
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