prot_L-elsbetiae_contig5.12999.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig5.12999.1
Unique Nameprot_L-elsbetiae_contig5.12999.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length139
Homology
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Match: D7G2F8_ECTSI (DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F8_ECTSI)

HSP 1 Score: 221 bits (564), Expect = 1.520e-68
Identity = 104/143 (72.73%), Postives = 130/143 (90.91%), Query Frame = 0
Query:    1 NEPERVRGVGDSVMKELSTFYEEGRMNRLEGLEADPRVRSLELFQKISWVGPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEAAEIEALVAEVAQSICPG----ACGSYRRGKSNCGDVDVLIRPP 139
            +EP+RVRG+GDSVMKELSTFYEEGRM+RL+GLEADP+++ L++ Q++ WVG +KA++L+D G+RSIED+R +G H+L+EQ +ICLSRHEDI+QRMPRSEAAEIEA+V +VAQSICPG    ACGSYRRGKS+CGDVDVLIRPP
Sbjct:   90 HEPQRVRGLGDSVMKELSTFYEEGRMHRLDGLEADPKLKCLKILQEVGWVGAVKAQQLYDKGVRSIEDLRTKGLHLLSEQAQICLSRHEDIMQRMPRSEAAEIEAVVTKVAQSICPGVICQACGSYRRGKSHCGDVDVLIRPP 232          
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Match: A0A6H5JHQ3_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ3_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 1.410e-65
Identity = 102/139 (73.38%), Postives = 127/139 (91.37%), Query Frame = 0
Query:    1 NEPERVRGVGDSVMKELSTFYEEGRMNRLEGLEADPRVRSLELFQKISWVGPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEAAEIEALVAEVAQSICPGACGSYRRGKSNCGDVDVLIRPP 139
            +EP+RVRG+GDSVMKEL+TFYEEGRM RL+ LEADP+++ L++FQ++ WVG +KA++L+D G+RSIED+R +G H+L+EQ +ICL+RHEDI QRMPRSEAAEIEA+V  VAQSICPGACGSYRRGKS+CGDVDVLIRPP
Sbjct:  566 HEPQRVRGLGDSVMKELATFYEEGRMYRLDELEADPKLKCLKIFQEVGWVGAVKAQQLYDQGIRSIEDLRTKGLHLLSEQAQICLNRHEDITQRMPRSEAAEIEAVVTRVAQSICPGACGSYRRGKSHCGDVDVLIRPP 704          
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Match: D7G2F7_ECTSI (DNA polymerase lambda n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2F7_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 7.090e-53
Identity = 97/146 (66.44%), Postives = 114/146 (78.08%), Query Frame = 0
Query:    1 NEPERVRGVGDSVMKELSTFYEEGR-MNRLEGLEADPRVRS--LELFQKISWVGPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEAAEIEALVAEVAQSICPG----ACGSYRRGKSNCGDVDVLIRPP 139
            N+PERVRGVGD  MKEL+ F  EG+  +R     ADP      L+LFQ++ WVG +KAR+L+D G+RSIED+R  G+ +LTEQ R+CL+RHEDI QRMPRSEAAEIEA V +VAQSICPG    ACGSYRRGKSNCGDVDVLIRPP
Sbjct:  346 NDPERVRGVGDGAMKELTAFLAEGKGKSRAPVSGADPPAPEACLKLFQEVGWVGAVKARQLYDKGMRSIEDLRTSGRDLLTEQMRVCLNRHEDIKQRMPRSEAAEIEAAVTKVAQSICPGVICQACGSYRRGKSNCGDVDVLIRPP 491          
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Match: A0A6H5JQ91_9PHAE (DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ91_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 2.460e-38
Identity = 78/138 (56.52%), Postives = 92/138 (66.67%), Query Frame = 0
Query:   20 FYEEGRMNRLEGLEADPRV--RSLELFQKISWVGPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEAAEIEALVAEVAQSICPG----------------ACGSYRRGKSNCGDVDVLIRPP 139
            F    R  R    E DP      L+LFQ++ WVG +K ++L+D G+RSIE++R RG+H+LTEQ R CL+RHEDI  RMPRSEAAEIEA V +VAQSICPG                ACGSYRR K NCGDVDVLIRPP
Sbjct:  326 FLPRARARRSPVSEVDPPTVEACLKLFQEVGWVGAVKTQQLYDKGMRSIENLRTRGRHLLTEQVRFCLNRHEDIKPRMPRSEAAEIEAAVTKVAQSICPGVICQASFLTSPRRRTEACGSYRRVKRNCGDVDVLIRPP 463          
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Match: A0A8B7XIU3_ACAPL (DNA polymerase n=4 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7XIU3_ACAPL)

HSP 1 Score: 114 bits (285), Expect = 6.360e-27
Identity = 59/142 (41.55%), Postives = 89/142 (62.68%), Query Frame = 0
Query:    2 EPERVRGVGDSVMKELSTFYEEGRMNRLEGLEADPRVRSLELFQKISWVGPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEAAEIEALVAEVAQSICPG----ACGSYRRGKSNCGDVDVLIRPP 139
            E  ++ G+G  +  ++S   E G + +++ +     +++L++F +I  VGP  A+E    G R+++DVRE+ +  LT Q +I L  +ED ++RMPR EA EIE  V E+A+S  PG     CGSYRRGK+ CGDVDVLI  P
Sbjct:  352 EANKIPGIGTRLADKISEILESGHLRKIDHVCGGEDMKALDIFNQIWGVGPTVAQEWVQLGFRTLDDVREKAK--LTRQQKIGLKHYEDFLERMPRQEAGEIERTVREMAESATPGMLAVVCGSYRRGKATCGDVDVLITHP 491          
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Match: K1PLM1_CRAGI (DNA polymerase n=1 Tax=Crassostrea gigas TaxID=29159 RepID=K1PLM1_CRAGI)

HSP 1 Score: 107 bits (268), Expect = 1.470e-26
Identity = 58/142 (40.85%), Postives = 83/142 (58.45%), Query Frame = 0
Query:    2 EPERVRGVGDSVMKELSTFYEEGRMNRLEGLEADPRVRSLELFQKISWVGPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEAAEIEALVAEVAQSICPGA----CGSYRRGKSNCGDVDVLIRPP 139
            E   + GVG  +  ++    E G + +L    AD  ++ +ELF  +   G   AR+ F  G R+++D+R + +  LT Q +I L  +EDI+ RMPR+EAA IE +V E A+ + PG     CGSYRRGK  CGDVDVL+  P
Sbjct:   36 EARALPGVGTRLADKIWEIAESGELRKLNEFNADKDIKVIELFTNVWGAGAHTARQWFQQGFRTLDDLRTKAK--LTHQQKIGLKHYEDILDRMPRTEAAAIEQVVREAAEFLAPGVIAQCCGSYRRGKPTCGDVDVLLTHP 175          
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Match: UPI0018D8C18B (DNA polymerase lambda-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D8C18B)

HSP 1 Score: 110 bits (276), Expect = 1.300e-25
Identity = 59/142 (41.55%), Postives = 87/142 (61.27%), Query Frame = 0
Query:    2 EPERVRGVGDSVMKELSTFYEEGRMNRLEGLEADPRVRSLELFQKISWVGPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEAAEIEALVAEVAQSICPG----ACGSYRRGKSNCGDVDVLIRPP 139
            E  ++ G+G  +  ++S   E G + +++ +     +++L++F  I  VGP  A+E    G R+++DVRE+ +  L  Q +I L  +ED +QRM R EA EIE  V E+A+SI PG     CGSYRRGK+ CGDVDVLI  P
Sbjct:  353 EANKIPGIGTRLADKISEILESGHLRKIDHVCGGEDMKALDIFNNIWGVGPTVAQEWVQLGYRTLDDVREKAK--LNRQQKIGLKHYEDFLQRMQREEAGEIERTVREMAESIDPGMLAVVCGSYRRGKTTCGDVDVLITHP 492          
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Match: A0A7R8WZ31_9CRUS (DNA polymerase lambda (Fragment) n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R8WZ31_9CRUS)

HSP 1 Score: 109 bits (272), Expect = 2.200e-25
Identity = 57/138 (41.30%), Postives = 85/138 (61.59%), Query Frame = 0
Query:    6 VRGVGDSVMKELSTFYEEGRMNRLEGLEADPRVRSLELFQKISWVGPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEAAEIEALVAEVAQSICPG----ACGSYRRGKSNCGDVDVLIRPP 139
            + G+G S+  ++    E+G++ + E L    +VR+LELF  I  VG   A   +  GLR++ DV+ +    LT Q +I L   +D+++RM R+EA EI A++ +  + +CPG    ACGSYRRGKS CGDVDVL+  P
Sbjct:  185 LHGIGPSLADKIWEIVEQGKLRKAEKLSEGEKVRTLELFTSIWGVGATTAELWYGMGLRNLNDVKTKAH--LTHQQQIGLKCFDDLLERMSRAEAGEIAAVIRKAVEELCPGTQTFACGSYRRGKSTCGDVDVLVTHP 320          
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Match: UPI0003596D47 (DNA polymerase lambda n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI0003596D47)

HSP 1 Score: 108 bits (271), Expect = 5.730e-25
Identity = 57/135 (42.22%), Postives = 84/135 (62.22%), Query Frame = 0
Query:    9 VGDSVMKELSTFYEEGRMNRLEGLEADPRVRSLELFQKISWVGPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEAAEIEALVAEVAQSICPG----ACGSYRRGKSNCGDVDVLIRPP 139
            +G  +  ++    E G + +L+ L++   VR LE F  +   GP  A++ F  G R+IED++E+    LT Q ++ +  ++D++ RMPR EAAEIE +V E A+SI  G    ACGSYRRGK+ CGDVDVL+  P
Sbjct:  318 IGKRLADKIWEIAESGELRKLQELKSSEEVRVLETFTNVWGAGPTTAQQWFQQGFRTIEDLKEKAH--LTHQQKVGVRLYQDLLDRMPREEAAEIEKVVREAAESIQEGVVAQACGSYRRGKATCGDVDVLVTHP 450          
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Match: A0A8B8EPU1_CRAVI (DNA polymerase n=2 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8EPU1_CRAVI)

HSP 1 Score: 107 bits (268), Expect = 8.500e-25
Identity = 58/142 (40.85%), Postives = 82/142 (57.75%), Query Frame = 0
Query:    2 EPERVRGVGDSVMKELSTFYEEGRMNRLEGLEADPRVRSLELFQKISWVGPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEAAEIEALVAEVAQSICPGA----CGSYRRGKSNCGDVDVLIRPP 139
            E   + GVG  +  ++    E G + +L    AD  ++ +ELF  +   G   AR+ F  G R+++D+R + +  LT Q RI L  ++DI+ RMPR EAA IE +V E A+ + PG     CGSYRRGK  CGDVDVL+  P
Sbjct:  271 EARNLPGVGTRLADKIWEIAESGELRKLNEFNADEDIKVIELFTNVWGAGAHTARQWFQQGFRTLDDLRTKAK--LTHQQRIGLKHYDDILDRMPRMEAAAIEQVVREAAEFLAPGVIAQCCGSYRRGKPTCGDVDVLVTHP 410          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig5.12999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2F8_ECTSI1.520e-6872.73DNA polymerase n=1 Tax=Ectocarpus siliculosus TaxI... [more]
A0A6H5JHQ3_9PHAE1.410e-6573.38DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP ... [more]
D7G2F7_ECTSI7.090e-5366.44DNA polymerase lambda n=1 Tax=Ectocarpus siliculos... [more]
A0A6H5JQ91_9PHAE2.460e-3856.52DNA polymerase lambda n=1 Tax=Ectocarpus sp. CCAP ... [more]
A0A8B7XIU3_ACAPL6.360e-2741.55DNA polymerase n=4 Tax=Acanthaster planci TaxID=13... [more]
K1PLM1_CRAGI1.470e-2640.85DNA polymerase n=1 Tax=Crassostrea gigas TaxID=291... [more]
UPI0018D8C18B1.300e-2541.55DNA polymerase lambda-like n=1 Tax=Patiria miniata... [more]
A0A7R8WZ31_9CRUS2.200e-2541.30DNA polymerase lambda (Fragment) n=1 Tax=Darwinula... [more]
UPI0003596D475.730e-2542.22DNA polymerase lambda n=1 Tax=Aplysia californica ... [more]
A0A8B8EPU1_CRAVI8.500e-2540.85DNA polymerase n=2 Tax=Crassostrea virginica TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002008DNA polymerase family X, beta-likePRINTSPR00870DNAPOLXBETAcoord: 118..137
score: 52.0
coord: 8..25
score: 25.56
IPR022312DNA polymerase family XPRINTSPR00869DNAPOLXcoord: 117..131
score: 44.1
coord: 131..139
score: 57.26
coord: 49..66
score: 32.48
NoneNo IPR availableGENE3D3.30.460.10coord: 94..139
e-value: 1.4E-12
score: 49.8
NoneNo IPR availableGENE3D1.10.150.20coord: 32..92
e-value: 1.8E-14
score: 55.2
NoneNo IPR availablePANTHERPTHR11276DNA POLYMERASE TYPE-X FAMILY MEMBERcoord: 3..138
NoneNo IPR availableSUPERFAMILY81585PsbU/PolX domain-likecoord: 35..94
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 94..138
IPR028207DNA polymerase beta, palm domainPFAMPF14792DNA_pol_B_palmcoord: 94..137
e-value: 4.4E-13
score: 49.4
IPR018944DNA polymerase lambda, fingers domainPFAMPF10391DNA_pol_lambd_fcoord: 43..91
e-value: 1.6E-11
score: 43.8
IPR019843DNA polymerase family X, binding sitePROSITEPS00522DNA_POLYMERASE_Xcoord: 120..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig5contigL-elsbetiae_contig5:98912..99927 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig5.12999.1mRNA_L-elsbetiae_contig5.12999.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig5 98912..99927 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig5.12999.1 ID=prot_L-elsbetiae_contig5.12999.1|Name=mRNA_L-elsbetiae_contig5.12999.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=139bp
NEPERVRGVGDSVMKELSTFYEEGRMNRLEGLEADPRVRSLELFQKISWV
GPIKARELFDYGLRSIEDVRERGQHILTEQGRICLSRHEDIVQRMPRSEA
AEIEALVAEVAQSICPGACGSYRRGKSNCGDVDVLIRPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002008DNA_pol_X_beta-like
IPR022312DNA_pol_X
IPR028207DNA_pol_B_palm_palm
IPR018944DNA_pol_lambd_fingers_domain
IPR019843DNA_pol-X_BS