prot_L-elsbetiae_contig4995.12990.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4995.12990.1
Unique Nameprot_L-elsbetiae_contig4995.12990.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length154
Homology
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BLAST of mRNA_L-elsbetiae_contig4995.12990.1 vs. uniprot
Match: D8LHI7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHI7_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 2.800e-21
Identity = 64/111 (57.66%), Postives = 73/111 (65.77%), Query Frame = 0 
Query:    4 GAGGEADRQTAAT--EKVAAALSVGGVALAPKSRADVEDTVDAAVQAALLWLLSGRGSGARTAG--TAARALQAAAVHLAAYWLEPYRTVSRTTGCRTSRYLESTVEDAAI 110
            G  G+A    A T   K A   SVGGVA+ P+S ADV DTVDAAV+ ALLWLLSG   G R  G   A  A QAAAVHL A W+E Y+ +SRT G R SR+LEST EDAA+
Sbjct:  973 GGDGKAGAGAAGTGVRKEAEGFSVGGVAVVPESWADVGDTVDAAVEGALLWLLSGVRGGGRVGGXXAAETAQQAAAVHLVACWVERYQAMSRTIGRRGSRHLESTAEDAAV 1083
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BLAST of mRNA_L-elsbetiae_contig4995.12990.1 vs. uniprot
Match: A0A6H5JML9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML9_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 1.000e-18
Identity = 56/99 (56.57%), Postives = 64/99 (64.65%), Query Frame = 0 
Query:   14 AATEKVAAALSVGGVALAPKSRADVEDTVDAAVQAALLWLLSG--RGSGARTAGTAARALQAAAVHLAAYWLEPYRTVSRTTGCRTSRYLESTVEDAAI 110
            A   K A   SVGGV + P+S ADV DTVDAAV+A LLWLL     G G    GTA  A QAAAVHL A W+E Y+ +SRT G R S +LES  EDAA+
Sbjct:  522 AGLRKEAEGFSVGGVVVVPESWADVGDTVDAAVEAVLLWLLRSVRGGGGVDGGGTAETAQQAAAVHLVACWMERYQAMSRTAGRRASGHLESIAEDAAV 620
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4995.12990.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LHI7_ECTSI2.800e-2157.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JML9_9PHAE1.000e-1856.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 123..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4995contigL-elsbetiae_contig4995:11826..12514 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4995.12990.1mRNA_L-elsbetiae_contig4995.12990.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4995 11307..12684 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4995.12990.1 ID=prot_L-elsbetiae_contig4995.12990.1|Name=mRNA_L-elsbetiae_contig4995.12990.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=154bp
MKNGAGGEADRQTAATEKVAAALSVGGVALAPKSRADVEDTVDAAVQAAL
LWLLSGRGSGARTAGTAARALQAAAVHLAAYWLEPYRTVSRTTGCRTSRY
LESTVEDAAICSRLSWPPPCRCCRGGGCGTCVLWFVAQCYFGSRATKWSP
WGC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0060582Fe2S_fd_BS