prot_L-elsbetiae_contig4991.12985.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4991.12985.1
Unique Nameprot_L-elsbetiae_contig4991.12985.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length298
Homology
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BLAST of mRNA_L-elsbetiae_contig4991.12985.1 vs. uniprot
Match: A0A6H5KWU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWU5_9PHAE)

HSP 1 Score: 317 bits (811), Expect = 4.250e-95
Identity = 215/301 (71.43%), Postives = 234/301 (77.74%), Query Frame = 0 
Query:    1 MALTLKEQADEVASADTARFEAKEEEIKMANQEAAAAEAPTPDKGKXXXXXXXXXXXXXXXXXXXXDPEARA-RRKALAKVKSTLGRLQRRVDGFWYSKHAFAGASGFRKRVLLAMEKDVTLAGGLGTDRIRVYRPLTGAKDYSRAKLRESYEKVAIDMAKGYWRQEYSGERNEIRFKHFVILAGSVLPVWQKVEDVLNANTHTQHERRLRIVRATEKEDEWNKADEEXXXXXXXXXXXXXXXXXXXXXEA--PADKAGATPDGGKAEAEAKAGGDGKKGICCEVCGGSQDASAEGSDKEE 298
            M L+LK+QAD VAS +TARFEAKE EIK A+Q+A  AEAPT     XXXXXXXXXXXXXXXXXXXX       RRK L+KVKSTLGRLQRRVDGFWYSK  FAGASGFRKRVLLAMEKDVTLAG L TDRIRVYRPLTGAKDYSRAKLRESYEKV++D A+GYWR+EYSGERNEIRFKHFVILAGSVLPVW+KVE VLNANTHTQHERRLRIVRATEKEDEW+   ++           XXXXXXXX   A   AD AG    G KA  ++ +  D K   CCEVCGGSQD      ++EE
Sbjct:  367 MGLSLKQQADTVASTETARFEAKEAEIKKASQKAGDAEAPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRKELSKVKSTLGRLQRRVDGFWYSKFPFAGASGFRKRVLLAMEKDVTLAGELATDRIRVYRPLTGAKDYSRAKLRESYEKVSVDKARGYWREEYSGERNEIRFKHFVILAGSVLPVWRKVEGVLNANTHTQHERRLRIVRATEKEDEWDNMPDDDGTGGNGQEGGXXXXXXXXKEGAGEKADSAGGEASGDKATGDSSSKEDEKP--CCEVCGGSQDVGDSSGEEEE 665
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BLAST of mRNA_L-elsbetiae_contig4991.12985.1 vs. uniprot
Match: D8LN05_ECTSI (PHD-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN05_ECTSI)

HSP 1 Score: 223 bits (567), Expect = 2.230e-63
Identity = 132/178 (74.16%), Postives = 143/178 (80.34%), Query Frame = 0 
Query:  114 AMEKDVTLAGGLGTDRIRVYRPLTGAKDYSRAKLRESYEKVAIDMAKGYWRQEYSGERNEIRFKHFVILAGSVLPVWQKVEDVLNANTHTQHERRLRIVRATEKEDEWNKADEEXXXXXXXXXXXXXXXXXXXXXEAPADKAGATPDGGKAEAEAKAGGDGKKGI---CCEVCGGSQD 288
            AMEKDVTLAGGL TDRIRVYRPLTGAKDYSRAKLRESYEKV++D A+GYWR+EYSGERNEIRFKHFVILAGSVLPVW+KVE VLNANTHTQHERRLRIVRATEKEDEWN  D++          XXXXXXXXX  E   +KAG+  DGG+A  +  AG    K     CCEVCGGSQD
Sbjct:  321 AMEKDVTLAGGLATDRIRVYRPLTGAKDYSRAKLRESYEKVSVDKARGYWREEYSGERNEIRFKHFVILAGSVLPVWRKVEGVLNANTHTQHERRLRIVRATEKEDEWNMHDDDGTGENGKEGGXXXXXXXXXK-EGAGEKAGS--DGGRASGDKAAGDSSSKEDEKPCCEVCGGSQD 495
[Close]
BLAST of mRNA_L-elsbetiae_contig4991.12985.1 vs. uniprot
Match: D8LL29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL29_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 3.720e-25
Identity = 86/120 (71.67%), Postives = 95/120 (79.17%), Query Frame = 0 
Query:    1 MALTLKEQADEVASADTARFEAKEEEIKMANQEAAAAEAPTPDKGKXXXXXXXXXXXXXXXXXXXXDPEARARRKALAKVKSTLGRLQRRVDGFWYSKHAFAGASGFRKRVLLAMEKDVT 120
            M L+LK+QAD VASA+TARFEAKE +IK  +Q+A  AEAPT     XXXXXXXXXXXXXXXXXXXX      RRK L+KVKSTLGRLQRRVDGFWYSK  FAGASGFRKRVLL +   +T
Sbjct:    1 MGLSLKQQADTVASAETARFEAKEADIKKTSQKAGDAEAPTXXXXXXXXXXXXXXXXXXXXXXXXXXX----RRKELSKVKSTLGRLQRRVDGFWYSKFPFAGASGFRKRVLLGVRPQMT 116
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4991.12985.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KWU5_9PHAE4.250e-9571.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LN05_ECTSI2.230e-6374.16PHD-type domain-containing protein (Fragment) n=1 ... [more]
D8LL29_ECTSI3.720e-2571.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12706:SF13PROTEIN STRAWBERRY NOTCHcoord: 82..219
IPR026741Protein strawberry notchPANTHERPTHR12706STRAWBERRY NOTCH-RELATEDcoord: 82..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4991contigL-elsbetiae_contig4991:238..5294 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4991.12985.1mRNA_L-elsbetiae_contig4991.12985.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4991 238..5294 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4991.12985.1 ID=prot_L-elsbetiae_contig4991.12985.1|Name=mRNA_L-elsbetiae_contig4991.12985.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=298bp
MALTLKEQADEVASADTARFEAKEEEIKMANQEAAAAEAPTPDKGKGGSS
GSSGSSGSSSATKKKKDPEARARRKALAKVKSTLGRLQRRVDGFWYSKHA
FAGASGFRKRVLLAMEKDVTLAGGLGTDRIRVYRPLTGAKDYSRAKLRES
YEKVAIDMAKGYWRQEYSGERNEIRFKHFVILAGSVLPVWQKVEDVLNAN
THTQHERRLRIVRATEKEDEWNKADEEEAKAGTGSGSGSGSGAEGEGKEA
PADKAGATPDGGKAEAEAKAGGDGKKGICCEVCGGSQDASAEGSDKEE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026741SNO