prot_L-elsbetiae_contig4966.12942.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4966.12942.1
Unique Nameprot_L-elsbetiae_contig4966.12942.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length470
Homology
BLAST of mRNA_L-elsbetiae_contig4966.12942.1 vs. uniprot
Match: A0A6H5K2H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2H3_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 6.450e-61
Identity = 128/239 (53.56%), Postives = 144/239 (60.25%), Query Frame = 0
Query:    1 MLEELTDRQRRDYGLQVISARKREREPLLDPARPGKRKLGGSAAKARDIQAAALMAKMVRPLKKAVERVEVDTSVPSFKEKINPFSSDGESFNCAACKVEIFNAYMHCYGCETILHRDLTLCLGCHAAGRFAFPAAPPETVVLSDRDHCPGIRARTLDQRERKSRSQRGHGMYPASRCECKEPSCRQCHLCVACACDCHERYQLRFRFEHPSSLESFVKRVRLTAGGGTTISQESPANS 239
            MLEELTDRQ RDYGLQ  +A KRE    L+P+RPGKRKLG +AAKARD Q   LMAKMV+PLK A  RVEVDTS+P+F EKINPFSSDGESFNCA+C                                                         RTL+QRER SRSQR HG++PAS C+CKEPSCRQCHLCVACACDCHER+QLR+RFEHP              GG T+ SQE P +S
Sbjct:  332 MLEELTDRQLRDYGLQAKAAEKREAAVTLNPSRPGKRKLGPAAAKARDAQTMQLMAKMVKPLKDAAGRVEVDTSIPTFLEKINPFSSDGESFNCASCN-------------------------------------------------------ERTLEQRERMSRSQRSHGVFPASMCDCKEPSCRQCHLCVACACDCHERFQLRYRFEHP--------------GGATSTSQELPLDS 501          
BLAST of mRNA_L-elsbetiae_contig4966.12942.1 vs. uniprot
Match: D8LCL4_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL4_ECTSI)

HSP 1 Score: 214 bits (546), Expect = 3.860e-57
Identity = 109/152 (71.71%), Postives = 121/152 (79.61%), Query Frame = 0
Query:    1 MLEELTDRQRRDYGLQVISARKREREPLLDPARPGKRKLGGSAAKARDIQAAALMAKMVRPLKKAVERVEVDTSVPSFKEKINPFSSDGESFNCAACKVEIFNAYMHCYGCETILHRDLTLCLGCHAAGRFAFPAAPPETVVLSDRDHCPGI 152
            MLEELTDRQ RDY LQ  +A KRE    LDP+RPGKRKLG +AAKARD Q   LMAKMV+PLK AV +VEVDTS+P+F EKINPFSSDGESFNCA+CK EIFNAY+HCYGCET+L RDLTLCL CHAAGRF F          +D+DHCPGI
Sbjct: 1146 MLEELTDRQLRDYELQAKAAEKREAAVTLDPSRPGKRKLGPAAAKARDAQTVQLMAKMVKPLKDAVGKVEVDTSIPTFLEKINPFSSDGESFNCASCKAEIFNAYLHCYGCETLLSRDLTLCLACHAAGRFGFSTGAGGG--CTDQDHCPGI 1295          
BLAST of mRNA_L-elsbetiae_contig4966.12942.1 vs. uniprot
Match: A0A7S2YQT9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YQT9_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.040e-10
Identity = 50/156 (32.05%), Postives = 71/156 (45.51%), Query Frame = 0
Query:   81 KINPFSS----DGESFNCAACKVEIFNAYMHCYGCETILHRDLTLCLGCHAAGRFAFPAAPPETVVLSDRDHCPGIRARTLDQRERKSR----SQRGHGMYPASRCECKEPS--CRQCHLCVACACDCHERYQLRFRFEHPSSLESFVKRVRLTAG 226
            ++NP SS    DG  + C  C  E+ N Y+HC GCE +LH+D  +C+ C+ A R+       E + +    H  G     LD+  R S      + G G   AS C C      C+ C +C  CAC CH  + +R RF    +L+      R   G
Sbjct:  573 ELNPLSSTVDPDGNDYFCRICSKELENVYLHCDGCEDLLHQDFNICMDCYDAKRWQ------ENIDM----HGKG-----LDEENRSSMMNHTGKHGLGQSRAS-CGCTSQFRLCQDCGMCSGCACFCHSWFTVRRRFYDKQALKKLADWARRRVG 712          
BLAST of mRNA_L-elsbetiae_contig4966.12942.1 vs. uniprot
Match: F0W0K4_9STRA (Uncharacterized protein AlNc14C4G646 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0K4_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 2.500e-7
Identity = 46/147 (31.29%), Postives = 60/147 (40.82%), Query Frame = 0
Query:   86 SSDGESFNCAACKVEIFNAYMHCYGCETILHRD--------LT-LCLGCHAAGRFAFPAAPPETVVLSDRDHCPGIRARTLDQRERKSRSQRGHGMYPASRCECKEPS-CRQCHLCVACACDCHERYQLRFRFEHPSSLESFVKRVR 222
            S D  +F C  C  E+ N Y  C GC     +D        LT LC  CH          P E      R     +R+  L      S       ++   RC+CK    C  C LCV C C CH R+Q+R+RF  P +L   +K V+
Sbjct:  250 SEDASNFTCNLCNRELVNGYQLCLGCLACSQKDNSSQIQSKLTRLCYQCHLK-------YPKE----HQRKRLKQLRSLQLPFVSSASLLNPSIRLHSPLRCDCKTTMRCSFCTLCVLCDCQCHTRFQIRYRFATPDTLNRLMKDVK 385          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4966.12942.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5K2H3_9PHAE6.450e-6153.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCL4_ECTSI3.860e-5771.71ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A7S2YQT9_9STRA2.040e-1032.05Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
F0W0K4_9STRA2.500e-731.29Uncharacterized protein AlNc14C4G646 n=1 Tax=Albug... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4966contigL-elsbetiae_contig4966:2115..8620 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4966.12942.1mRNA_L-elsbetiae_contig4966.12942.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4966 740..8666 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4966.12942.1 ID=prot_L-elsbetiae_contig4966.12942.1|Name=mRNA_L-elsbetiae_contig4966.12942.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=470bp
MLEELTDRQRRDYGLQVISARKREREPLLDPARPGKRKLGGSAAKARDIQ
AAALMAKMVRPLKKAVERVEVDTSVPSFKEKINPFSSDGESFNCAACKVE
IFNAYMHCYGCETILHRDLTLCLGCHAAGRFAFPAAPPETVVLSDRDHCP
GIRARTLDQRERKSRSQRGHGMYPASRCECKEPSCRQCHLCVACACDCHE
RYQLRFRFEHPSSLESFVKRVRLTAGGGTTISQESPANSSVAGTIGAAAA
GAGREGGDGSGDGERPPSSTGASSGRAVPAGGSGTGTGTGSGSGADSGRD
GQRPEGGPRQQPCQRRGEAASPQDSEDNAATAVAAAAEAAAAAAAVAAAA
EATGGGVKRAREDESPSSRKRTARDLSPAVAAAAAPFQRWAIDGGHSDSE
SSGGSDEPAAAPSTKVALKSSTTAAAAAVAGGGGGGGGNTDGEGAMMQHH
EAADAPDWDEENDADTVLL*
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