prot_L-elsbetiae_contig496.12931.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig496.12931.1
Unique Nameprot_L-elsbetiae_contig496.12931.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length315
Homology
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BLAST of mRNA_L-elsbetiae_contig496.12931.1 vs. uniprot
Match: D7FHY8_ECTSI (Trithorax 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY8_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 4.450e-41
Identity = 73/107 (68.22%), Postives = 89/107 (83.18%), Query Frame = 0 
Query:  162 RDKVSRPKNDPLRKGNRMWNLKHMRATQEGKVDVCSRCRSRPDGGMMVCANRDLAKYHKFCFPCLQ-KDNVKKIDLVGGSTKWKCPLCRDFRARPKRGSHPPSYLRG 267
            R+KV+  K DPLRK NRMWNLKHMRATQEGK+DVC+ CR  PDGG+MVC++++LAK H FCFPCL+ KD ++K DLVGG  KW+CP CR+ R+RPKRG+ PPS LRG
Sbjct: 1446 REKVTLGKKDPLRKENRMWNLKHMRATQEGKMDVCAYCRLHPDGGLMVCSSQELAKMHSFCFPCLKRKDGIEKSDLVGGGIKWECPTCRERRSRPKRGAGPPSSLRG 1552
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BLAST of mRNA_L-elsbetiae_contig496.12931.1 vs. uniprot
Match: D7FI07_ECTSI (GF22528 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI07_ECTSI)

HSP 1 Score: 152 bits (383), Expect = 2.200e-37
Identity = 70/108 (64.81%), Postives = 83/108 (76.85%), Query Frame = 0 
Query:  163 DKVSRPKNDPLRKGNRMWNLKHMRATQEGKVDVCSRCRSRPDGGMMVCANRDLAKYHKFCFPCLQKDN-VKKIDLVGGSTKWKCPLCRDFRARPKRGSHPPSYLRGAA 269
            +K +  KNDPLRK NRMWNLKHMRATQEGK+DVC+ CR +PDGG+MVC+  +LAK H FCFPCL++ N +K  DL GG  KW+CP C   +ARPKR  HPPS L GAA
Sbjct:  854 EKTTLGKNDPLRKENRMWNLKHMRATQEGKMDVCTYCRFQPDGGLMVCSTSELAKIHSFCFPCLKRKNGIKLSDLTGGDVKWECPPCLARKARPKRKPHPPSSLGGAA 961
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BLAST of mRNA_L-elsbetiae_contig496.12931.1 vs. uniprot
Match: A0A6H5L4S9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4S9_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 1.600e-35
Identity = 67/102 (65.69%), Postives = 78/102 (76.47%), Query Frame = 0 
Query:  169 KNDPLRKGNRMWNLKHMRATQEGKVDVCSRCRSRPDGGMMVCANRDLAKYHKFCFPCLQKDN-VKKIDLVGGSTKWKCPLCRDFRARPKRGSHPPSYLRGAA 269
            KNDPLRK NRMWNLKHMRAT+EGK+DVC+ CR  PDGG+MVC+  +LAK H FCFPCL++ N +K  DL GG  KW CP C + +ARPKR  HP S L GAA
Sbjct:  849 KNDPLRKENRMWNLKHMRATREGKMDVCAYCRLHPDGGLMVCSTPELAKNHSFCFPCLKRKNGIKLSDLTGGDVKWLCPPCLERKARPKRNPHPSSTLGGAA 950
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BLAST of mRNA_L-elsbetiae_contig496.12931.1 vs. uniprot
Match: A0A6H5JJY6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY6_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 5.720e-28
Identity = 57/84 (67.86%), Postives = 69/84 (82.14%), Query Frame = 0 
Query:  160 GKRDKVSRPKNDPLRKGNRMWNLKHMRATQEGKVDVCSRCRSRPDGGMMVCANRDLAKYHKFCFPCLQ-KDNVKKIDLVGGSTK 242
            G R+KV+  K DPLRK NRMWNLKHMRATQEGK+DVC+ CR  PDGG+MVC++++LAK H FCFPCL+ KD ++K DLVGG  K
Sbjct: 1332 GDREKVTLGKKDPLRKENRMWNLKHMRATQEGKMDVCAYCRLHPDGGLMVCSSQELAKMHSFCFPCLKRKDGIEKSDLVGGGIK 1415
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig496.12931.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FHY8_ECTSI4.450e-4168.22Trithorax 3 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FI07_ECTSI2.200e-3764.81GF22528 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5L4S9_9PHAE1.600e-3565.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JJY6_9PHAE5.720e-2867.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018866Zinc-finger domain of monoamine-oxidase A repressor R1PFAMPF10497zf-4CXXC_R1coord: 194..251
e-value: 6.4E-6
score: 26.3
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 186..252

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig496contigL-elsbetiae_contig496:25977..28106 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig496.12931.1mRNA_L-elsbetiae_contig496.12931.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig496 25977..28106 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig496.12931.1 ID=prot_L-elsbetiae_contig496.12931.1|Name=mRNA_L-elsbetiae_contig496.12931.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=315bp
HSRDNAPRVNGADGGSGSNEPLRARTRDELRPVGGGGGGGGGGGSSATGR
DPLRGSGGVTDNMGVDDGESDQPCGSPVSEEGQSGSSRGTGGRPVHARRE
THPRRATPPIGSFDEGASVSGSGGGSSSGSSNSSSSSSRRRQNSADAPST
KTAPLHPAGGKRDKVSRPKNDPLRKGNRMWNLKHMRATQEGKVDVCSRCR
SRPDGGMMVCANRDLAKYHKFCFPCLQKDNVKKIDLVGGSTKWKCPLCRD
FRARPKRGSHPPSYLRGAAATEAGGRDEASEECERADAGMRVKRSSSVAQ
MSMRAVETLSSRTGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018866Znf-4CXXC_R1
IPR011011Znf_FYVE_PHD