prot_L-elsbetiae_contig4953.12923.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4953.12923.1
Unique Nameprot_L-elsbetiae_contig4953.12923.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length131
Homology
BLAST of mRNA_L-elsbetiae_contig4953.12923.1 vs. uniprot
Match: D7FQB6_ECTSI (Ribosomal_S17_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB6_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 2.950e-89
Identity = 127/130 (97.69%), Postives = 129/130 (99.23%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHESCINTAVSVRKQFRMF 130
            MRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLH++SKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHE CINTAVSVRKQFRMF
Sbjct:   62 MRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHFVSKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHEPCINTAVSVRKQFRMF 191          
BLAST of mRNA_L-elsbetiae_contig4953.12923.1 vs. uniprot
Match: A0A835Z9X9_9STRA (Ribosomal protein S17-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9X9_9STRA)

HSP 1 Score: 229 bits (583), Expect = 5.050e-75
Identity = 105/130 (80.77%), Postives = 119/130 (91.54%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHESCINTAVSVRKQFRMF 130
            MRF KN+GLGFKTPK A  GTYVDKKCPFTG+VSIRGRILKGLV+SAGKM NT VIRRDYLHY++KYRRFEKRHKN+ VH +PC+ NVKEGDI+T+GQCRPLSKT+RFN LEHE CINT++SV+KQFRMF
Sbjct:   35 MRFYKNIGLGFKTPKLAISGTYVDKKCPFTGNVSIRGRILKGLVLSAGKMKNTCVIRRDYLHYVTKYRRFEKRHKNLMVHLSPCFPNVKEGDILTVGQCRPLSKTIRFNALEHEPCINTSISVKKQFRMF 164          
BLAST of mRNA_L-elsbetiae_contig4953.12923.1 vs. uniprot
Match: A0A7S2XWS0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWS0_9STRA)

HSP 1 Score: 218 bits (555), Expect = 9.610e-71
Identity = 104/130 (80.00%), Postives = 116/130 (89.23%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHESCINTAVSVRKQFRMF 130
            MRF KN+GLGFKTPK A EGTYVDKKCPFTG+VSIRGRILKGLVIS  KM NTI++RRDYLHYISKYRRFEKRHKNM VH +PC+  +KEGD+VTIGQCRPLSKTVRFNVLEH   +N A++V+KQFRMF
Sbjct:   37 MRFYKNIGLGFKTPKLAIEGTYVDKKCPFTGNVSIRGRILKGLVIST-KMKNTIIVRRDYLHYISKYRRFEKRHKNMAVHASPCFDTIKEGDVVTIGQCRPLSKTVRFNVLEHLPSVNQALNVKKQFRMF 165          
BLAST of mRNA_L-elsbetiae_contig4953.12923.1 vs. uniprot
Match: A0A7S4WCA2_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4WCA2_9DINO)

HSP 1 Score: 209 bits (533), Expect = 2.160e-67
Identity = 99/130 (76.15%), Postives = 113/130 (86.92%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHESCINTAVSVRKQFRMF 130
            MR+ KNVGLG KTPK A EGTYVDKKCPFTGDV+IRGRILKGLVIS  KMT TI++RRDYLHYI KYRR+EKRHKN+ VHC+P +  V EGD+VTIGQCRPLSKTVRFNV+EH   +N A++V+KQFRMF
Sbjct:   37 MRWTKNVGLGIKTPKNAVEGTYVDKKCPFTGDVAIRGRILKGLVIST-KMTRTIIVRRDYLHYIRKYRRYEKRHKNVAVHCSPAFDTVSEGDVVTIGQCRPLSKTVRFNVIEHLPTVNKAINVKKQFRMF 165          
BLAST of mRNA_L-elsbetiae_contig4953.12923.1 vs. uniprot
Match: F0XZW5_AURAN (Ribosomal_S17_N domain-containing protein n=3 Tax=Pelagomonadales TaxID=54409 RepID=F0XZW5_AURAN)

HSP 1 Score: 207 bits (528), Expect = 1.330e-66
Identity = 97/130 (74.62%), Postives = 117/130 (90.00%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHESCINTAVSVRKQFRMF 130
            MR+V+NVGLGFKTPK A EG+YVDKKCPFTG+VSIRGRILKG+VIS  KM  T+VIRRDYL++  KYRRFEKRHKNM+VHC+PC++NVKEGDIVT+GQCRPL+KTVRFNVL HE  +N +++V+K FR+F
Sbjct:   39 MRYVRNVGLGFKTPKLALEGSYVDKKCPFTGNVSIRGRILKGMVIST-KMKRTLVIRRDYLNWCGKYRRFEKRHKNMSVHCSPCFENVKEGDIVTVGQCRPLTKTVRFNVLTHEPAVNQSLNVKKVFRVF 167          
BLAST of mRNA_L-elsbetiae_contig4953.12923.1 vs. uniprot
Match: A0A7R9U3I9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3I9_9STRA)

HSP 1 Score: 207 bits (528), Expect = 2.470e-66
Identity = 94/130 (72.31%), Postives = 116/130 (89.23%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHESCINTAVSVRKQFRMF 130
            MR+VKN+GLGFKTP+ A EG YVD+KCPFTG+VSIRG+ILKG+VIS  KMT T+V+RRDYLH++ KY+R+EKRHKNMTVHC+P + NVK GD+VT+GQCRPLSKT+RFNVL HE  +N +VSV+KQFR+F
Sbjct:   58 MRYVKNIGLGFKTPQRAIEGNYVDRKCPFTGNVSIRGKILKGIVIS-NKMTRTVVVRRDYLHFVRKYKRYEKRHKNMTVHCSPAFTNVKPGDVVTVGQCRPLSKTIRFNVLVHEPAVNQSVSVKKQFRVF 186          
BLAST of mRNA_L-elsbetiae_contig4953.12923.1 vs. uniprot
Match: A0A812UUF3_SYMMI (RPS11 protein n=2 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812UUF3_SYMMI)

HSP 1 Score: 204 bits (520), Expect = 6.340e-66
Identity = 94/130 (72.31%), Postives = 115/130 (88.46%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHESCINTAVSVRKQFRMF 130
            MRF K+VGLGFKTPK A EG+YVDKKCPFTG+VSIRGRILKG+V+S  KM  T+VIRRDYL Y+ KYRRFEKRH NM+VHC+PC+QNV EGD+VT+GQCRPL+KTV+FNVLEH+  +N +++V+K FR+F
Sbjct:    1 MRFYKSVGLGFKTPKAASEGSYVDKKCPFTGNVSIRGRILKGIVVST-KMKRTVVIRRDYLQYVRKYRRFEKRHANMSVHCSPCFQNVCEGDVVTVGQCRPLAKTVKFNVLEHQPAVNKSLNVKKIFRVF 129          
BLAST of mRNA_L-elsbetiae_contig4953.12923.1 vs. uniprot
Match: A0A4D9CZU0_9STRA (Ribosomal_S17_N domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZU0_9STRA)

HSP 1 Score: 201 bits (512), Expect = 4.860e-64
Identity = 93/129 (72.09%), Postives = 111/129 (86.05%), Query Frame = 0
Query:    2 RFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHESCINTAVSVRKQFRMF 130
            R+ + VGLGFKTPK A+ GTYVDKKCPFTG VSIRGRILKG+V+S  KM  T++IRRDYLH++SKY RFEKRHKN+  HC+P +  VKEGDIVT+GQCRPLSKTVRFNVL+HE  IN A+S++KQFR+F
Sbjct:   49 RWTREVGLGFKTPKEAKAGTYVDKKCPFTGSVSIRGRILKGIVLST-KMNRTVIIRRDYLHWVSKYSRFEKRHKNLAAHCSPAFPQVKEGDIVTVGQCRPLSKTVRFNVLQHEPSINQALSIKKQFRVF 176          
BLAST of mRNA_L-elsbetiae_contig4953.12923.1 vs. uniprot
Match: A0A7S1XVW4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XVW4_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.000e-63
Identity = 91/130 (70.00%), Postives = 115/130 (88.46%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHESCINTAVSVRKQFRMF 130
            +R+VK++GLGFKTP+TA  G+YVDKKCPFTG+VSIRG+ILKG+VIS  KM  TIV+RRDYLH++ KY+R+EKRHKN+T HC+PC+ NVK GD+VTIGQCRPL+KT+RFNVL HE   N +V+V+KQFR+F
Sbjct:   38 IRYVKSIGLGFKTPETAISGSYVDKKCPFTGNVSIRGKILKGVVIS-NKMKRTIVVRRDYLHFVRKYKRYEKRHKNVTAHCSPCFVNVKPGDVVTIGQCRPLAKTIRFNVLTHEPSTNQSVNVKKQFRVF 166          
BLAST of mRNA_L-elsbetiae_contig4953.12923.1 vs. uniprot
Match: A0A7S1UA06_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UA06_9STRA)

HSP 1 Score: 200 bits (509), Expect = 2.560e-62
Identity = 91/130 (70.00%), Postives = 115/130 (88.46%), Query Frame = 0
Query:    1 MRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKMTNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCRPLSKTVRFNVLEHESCINTAVSVRKQFRMF 130
            +R+VK++GLGFKTP+TA  G+YVDKKCPFTG+VSIRG+ILKG+VIS  KM  TIV+RRDYLH++ KY+R+EKRHKN+T HC+PC+ NVK GD+VTIGQCRPL+KT+RFNVL HE   N +V+V+KQFR+F
Sbjct:  141 IRYVKSIGLGFKTPETAISGSYVDKKCPFTGNVSIRGKILKGVVIS-NKMKRTIVVRRDYLHFVRKYKRYEKRHKNVTAHCSPCFVNVKPGDVVTIGQCRPLAKTIRFNVLTHEPSTNQSVNVKKQFRVF 269          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4953.12923.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQB6_ECTSI2.950e-8997.69Ribosomal_S17_N domain-containing protein n=1 Tax=... [more]
A0A835Z9X9_9STRA5.050e-7580.77Ribosomal protein S17-domain-containing protein n=... [more]
A0A7S2XWS0_9STRA9.610e-7180.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4WCA2_9DINO2.160e-6776.15Hypothetical protein n=1 Tax=Alexandrium monilatum... [more]
F0XZW5_AURAN1.330e-6674.62Ribosomal_S17_N domain-containing protein n=3 Tax=... [more]
A0A7R9U3I9_9STRA2.470e-6672.31Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A812UUF3_SYMMI6.340e-6672.31RPS11 protein n=2 Tax=Symbiodinium microadriaticum... [more]
A0A4D9CZU0_9STRA4.860e-6472.09Ribosomal_S17_N domain-containing protein n=3 Tax=... [more]
A0A7S1XVW4_9STRA1.000e-6370.00Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1UA06_9STRA2.560e-6270.00Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000266Ribosomal protein S17/S11PRINTSPR00973RIBOSOMALS17coord: 101..108
score: 73.25
coord: 57..80
score: 35.33
coord: 91..101
score: 63.27
IPR000266Ribosomal protein S17/S11PFAMPF00366Ribosomal_S17coord: 42..112
e-value: 9.8E-27
score: 92.9
IPR000266Ribosomal protein S17/S11PANTHERPTHR1074440S RIBOSOMAL PROTEIN S11 FAMILY MEMBERcoord: 1..130
NoneNo IPR availableGENE3D2.40.50.1000coord: 1..130
e-value: 1.5E-60
score: 205.4
NoneNo IPR availablePANTHERPTHR10744:SF25coord: 1..130
NoneNo IPR availablePRODOMPD001295coord: 38..108
e-value: 2.0E-24
score: 272.0
IPR03244040S ribosomal protein S11, N-terminalPFAMPF16205Ribosomal_S17_Ncoord: 1..40
e-value: 1.7E-23
score: 82.7
IPR028333Ribosomal protein S17, archaeal/eukaryoticTIGRFAMTIGR03630TIGR03630coord: 21..113
e-value: 2.1E-31
score: 105.9
IPR019979Ribosomal protein S17, conserved sitePROSITEPS00056RIBOSOMAL_S17coord: 91..103
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 36..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4953contigL-elsbetiae_contig4953:7390..8695 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4953.12923.1mRNA_L-elsbetiae_contig4953.12923.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4953 7246..12608 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4953.12923.1 ID=prot_L-elsbetiae_contig4953.12923.1|Name=mRNA_L-elsbetiae_contig4953.12923.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=131bp
MRFVKNVGLGFKTPKTAREGTYVDKKCPFTGDVSIRGRILKGLVISAGKM
TNTIVIRRDYLHYISKYRRFEKRHKNMTVHCAPCWQNVKEGDIVTIGQCR
PLSKTVRFNVLEHESCINTAVSVRKQFRMF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000266Ribosomal_S17/S11
IPR032440Ribosomal_S11_N
IPR028333Ribosomal_S17_arc-typ
IPR019979Ribosomal_S17_CS
IPR012340NA-bd_OB-fold