prot_L-elsbetiae_contig493.12889.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig493.12889.1
Unique Nameprot_L-elsbetiae_contig493.12889.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length465
Homology
BLAST of mRNA_L-elsbetiae_contig493.12889.1 vs. uniprot
Match: D7FY36_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY36_ECTSI)

HSP 1 Score: 337 bits (865), Expect = 5.330e-110
Identity = 191/330 (57.88%), Postives = 221/330 (66.97%), Query Frame = 0
Query:  144 SVERLVMSVASSFKQEITACLPLHVLQFALEFVNLSENGVLCAVSKEFREAAEGDALWREAYKKRFPKKEAEGG-NALQGGPDASPDTSADASAGDDCAGGNGSD----NEAAAASPVASVTELSVEVVKFS-FKYLYKERIQDPHVGDHVEVVWKGKFRLESFEVYDGTAWWLAEVVDKGERPGFYQVHYPGWEDKWDEWVPRDRLRWGNERLAAALEGIAPKKGDSVEMWCQGLHVPGAWLEAVVHRVEKERLYLGEVLTSGHFWVDAEHVRLIKQSRAGEDGEEDQQEADGDVSA--HRTSSMLLQALSDAGFTGSTNSACC-CSVM 464
            +VE LV++VA+ FKQE+TA LPLHVLQ                   +FREAAEGD LWREAY +RFP  ++E   +A QGGPDA               GG G       EA A  P AS    S    K   FK  YK R+ DPHVGD V+V WKGKFRLES EVYDGTAWWLA VVDKGE+PG+Y+VHYPGWE KWDEWV RDRLRWGNE LAA L+GI  + GD+VE+WC+GLHVPGAWLEAVV+ VEKER+YLGEVLTSGHFW   EHVRLI++    +DG E +    G  SA   R++S+LLQ L+DAGFT  T S CC CSV 
Sbjct:   47 TVENLVVAVAAKFKQEVTASLPLHVLQ-------------------DFREAAEGDGLWREAYDERFPVLQSETSESAGQGGPDA---------------GGGGCGPVDCREATATKPTASGRNSSTGDEKGDGFKGRYKRRLLDPHVGDEVQVAWKGKFRLESLEVYDGTAWWLARVVDKGEKPGYYKVHYPGWEPKWDEWVVRDRLRWGNEHLAAPLKGIPLQAGDAVEVWCKGLHVPGAWLEAVVYEVEKERVYLGEVLTSGHFWARTEHVRLIQKGPVDDDGGEFRL---GYTSACRRRSNSVLLQCLTDAGFT--TESTCCYCSVQ 337          
BLAST of mRNA_L-elsbetiae_contig493.12889.1 vs. uniprot
Match: A0A835ZI68_9STRA (Tudor-knot domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI68_9STRA)

HSP 1 Score: 196 bits (497), Expect = 2.740e-56
Identity = 105/253 (41.50%), Postives = 139/253 (54.94%), Query Frame = 0
Query:  173 LEFVNLSENGVLCAVSKEFREAAEGDALWREAYKKRFPKKEAEGGNALQGGPDASPDTSADASAGDDCAGGNGSDNEAAAASPVASVTELSVEVVKFSFKYLYKERIQDPHVGDHVEVVWKGKFRLESFEVYDGTAWWLAEVVDKGERPGFYQVHYPGWEDKWDEWVPRDRLRWGNERLAAALEGIAPKKGDSVEMWCQGLHVPGAWLEAVVHRVEKERLYLGEVLTSGHFWVDAEHVRLIKQSRAGEDGEED 425
            + F++L E G L  +SK +R+ +E D LWRE YK RF                                    SD+  AA S  A    LS        K  +  R+  P VGD VEV W+GKFRLES EV+ G AWWLA+VV + +    Y+VHYPGWE +WDEWV R+RLRWGN+  AA L G   + GD+VE+WC G+HVPGAWLE  V  +  +R YLG++L +G F +     RL++++     GEE+
Sbjct:    1 MHFLSLPELGTLARLSKSWRQLSEHDYLWREPYKARFKI----------------------------------SDSLLAAGSDAAVTPPLSC-------KEAFARRLLHPQVGDRVEVAWRGKFRLESLEVFSGLAWWLADVVARSDDCRRYKVHYPGWEPRWDEWVSRERLRWGNDARAARLLGHPVEVGDTVEVWCGGVHVPGAWLEGRVSCIRSDRAYLGDMLAAGTFSIPLARCRLVRKAELMARGEEE 212          
BLAST of mRNA_L-elsbetiae_contig493.12889.1 vs. uniprot
Match: W7T606_9STRA (F-box domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T606_9STRA)

HSP 1 Score: 194 bits (492), Expect = 3.380e-53
Identity = 126/351 (35.90%), Postives = 182/351 (51.85%), Query Frame = 0
Query:   78 GAAAAWTIALCALWGCRDAHDLEASLDFMGKVV----LGLAPPEFGQAFSEF-----ENAIQTKKQELGMKVFNPSVERLVMSV-ASSFKQEITACLPLHVLQFALEFVNLSENGVLCAVSKEFREAAEGDALWREAYKKRFPKKEAEGGNALQGGPDASPDTSADASAGDDCAGGNGSDNEAAAASPVASVTELSVEVVKFSFKYLYKERIQDPHVGDHVEVVWKGKFRLESFEVYDGTAWWLAEVVDKGERPGFYQVHYPGWEDKWDEWVPRDRLRWGNERLAAALEGIAPKKGDSVEMWCQGLHVPGAWLEAVVHRVEKERLYLGEVLTSGHFWVDAEHVRLIKQSRA 418
            G  A WT A+  L+  +D   +   L  +  ++    LG A     Q  S+F     E A+  KK++    +F P V RL + V A  F ++    LP  VL +   F+++SE G+  +V ++++E  +  A+W+  Y KRF        + L    DAS                                T + + +   S++ L++ R+ DPHVGD VEV WKGKFRLES ++Y G AWW A VV+KGE    Y++HYPGW+ +WDEWV RDRLRW  E+     + I P   D VE+WC G +VPGAWLEA V +V+ +   +G VL+SG  WV+ E VR+  +  A
Sbjct:  102 GLGAGWTRAIVDLYNAQDPEQMIRCLQEIQSLLRTQKLGKAGVAKEQQQSKFCKKDLEAALNEKKKK-NPNLFIPDVRRLSLEVMAEFFDKDRVNKLPSAVLIYTASFMSISELGMAASVCQQWKETVQSVAVWKPLYIKRF--------HFLHSPDDAS--------------------------------TGIGLPL---SYQALFRARLLDPHVGDLVEVAWKGKFRLESMDIYQGLAWWSAVVVEKGENGARYKIHYPGWDSRWDEWVARDRLRWTVEQ--DLNKRIMPN--DDVEIWCCGSNVPGAWLEAKVRKVKGQTYCVGRVLSSGALWVNRERVRISPKGGA 404          
BLAST of mRNA_L-elsbetiae_contig493.12889.1 vs. uniprot
Match: A0A4D9D060_9STRA (F-box domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D060_9STRA)

HSP 1 Score: 184 bits (466), Expect = 5.540e-51
Identity = 108/282 (38.30%), Postives = 154/282 (54.61%), Query Frame = 0
Query:  124 EFENAIQTKKQELGMKVFNPSVERLVMSV-ASSFKQEITACLPLHVLQFALEFVNLSENGVLCAVSKEFREAAEGDALWREAYKKRFPKKEAEGGNALQGGPDASPDTSADASAGDDCAGGNGSDNEAAAASPVASVTELSVEVVKFSFKYLYKERIQDPHVGDHVEVVWKGKFRLESFEVYDGTAWWLAEVVDKGERPGFYQVHYPGWEDKWDEWVPRDRLRWGNERLAAALEGIAPKKGDSVEMWCQGLHVPGAWLEAVVHRVEKERLYLGEVLTSGHFW 404
            + E A+  KK++  + +F P V RL + V A  F ++    LP  VL +   F+++SE G+  +V ++++E  +  A+W+  Y KRF        + L    DAS                                T + + V   S+  L++ R+ DP+VGD VEV WKGKFRLES ++Y G AWW A VV+KGE    Y++HYPGW+ +WDEWVPRDRLRW  E+     + I P   D VE+WC G +VPGAWLEA V +V+ +   +G VL+SG  W
Sbjct:   35 DLEAALNEKKKKNSI-LFIPDVRRLSLEVMAEFFDKDRVNKLPSAVLIYTASFMSISELGMAASVCQQWKETVQSGAVWKPLYIKRF--------HFLHSPDDAS--------------------------------TGIGLPV---SYHALFRARLLDPYVGDLVEVAWKGKFRLESMDIYQGLAWWSAVVVEKGENGARYKIHYPGWDSRWDEWVPRDRLRWTVEQ--DLNKRIMPN--DDVEIWCCGSNVPGAWLEAKVRKVKGQTYCVGRVLSSGALW 268          
BLAST of mRNA_L-elsbetiae_contig493.12889.1 vs. uniprot
Match: A0A835ZFT0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT0_9STRA)

HSP 1 Score: 182 bits (461), Expect = 2.020e-50
Identity = 107/279 (38.35%), Postives = 141/279 (50.54%), Query Frame = 0
Query:  140 VFNPSVERLVMSVASSF--KQEITACLPLHVLQFALEFVNLSENG-VLCAVSKEFREAAEGDALWREAYKKRFPKKEAEGGNALQGGPDASPDTSADASAGDDCAGGNGSDNEAAAASPVASVTELSVEVVKFSFKYLYKERIQDPHVGDHVEVVWKGKFRLESFEVYDGTAWWLAEVVDKGERPGFYQVHYPGWEDKWDEWVPRDRLRWGNERLAAALEGIAPKKGDSVEMWCQGLHVPGAWLEAVVHRVEKERLYLGEVLTSGHFWVDAEHVRLIKQ 415
            +F   VE  V  + S      E  A LP  +     +F+ L E G  +C VS+++R+  E + LWRE Y  RF     +   A                                         EL+    K   K L+  R+  P VGD VEV W+GKFRLES E+Y+G AWWLAE+V+       Y+VHYPGWE +WDE+VPR+RLRWGN+R AA L       GD VE+WC G +VPGAWLE  V  +  ER++LG+V+  G F V  E  RL+ +
Sbjct:    6 LFVYKVEEAVAVITSHLLRSSEPAASLPPGLFLDIAQFLTLEERGKAVCCVSRKWRQLGEHNHLWREPYLTRFKFHSPQEDLATH-----------------------------------TEAQELAQPGPKV--KDLFARRLVRPQVGDRVEVAWRGKFRLESLEIYNGLAWWLAEIVECDADGQRYKVHYPGWEARWDEFVPRERLRWGNDRRAAQLRDERIAVGDMVEIWCGGTNVPGAWLEGRVSSIRGERVFLGDVVAEGFFSVTEERCRLVSK 247          
BLAST of mRNA_L-elsbetiae_contig493.12889.1 vs. uniprot
Match: A0A7S4A403_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A403_9STRA)

HSP 1 Score: 172 bits (437), Expect = 4.460e-46
Identity = 100/273 (36.63%), Postives = 137/273 (50.18%), Query Frame = 0
Query:  160 ITACLPLHVLQFALEFVNLSENGVLCAVSKEFREAAEGDALWREAYKKRFPKKEAEGGNALQGGPDASPDTSADASAGDDCAGGNGSDNEAAAASPVASVTELSVEVVKFSFKYLYKERIQDPHVGDHVEVVWKGKFRLESFEVYDGTAWWLAEVVDK------GERPG----------FYQVHYPGWEDKWDEWVPRDRLRWGNERLAAALEGIAPKKGDSVEMWCQGLHVPGAWLEAVVHRVEKERLYLGEVLTSGHFWVDAEHVRLIKQS 416
            ++  LP   +   L F++++ +  L  VS+++   +  DALWR+ Y  RF       G + +G  + S D   D                                     +K  YK+R++DPHVGD VEV W+GKFRLES E+Y GTAWW+A VVDK         PG          +Y+V +PGWE +WDEWV RDRLRW   R     E  A K  D VE+WC   +VPGAWLEA V ++  + + +G VL++G  WVD   VR  + S
Sbjct:   93 VSNTLPRDTMLLCLSFLDVTAHTTLSTVSRDWLSLSSEDALWRDHYLNRFS------GGSDEGDGETSADEYED-------------------------------------YKQEYKQRLEDPHVGDDVEVAWRGKFRLESLEIYRGTAWWVAVVVDKVALDAASGSPGRGRKIHAAKAWYKVTFPGWEGRWDEWVSRDRLRW---RAKNTQEADALKPRDFVEVWCGSQNVPGAWLEASVQKIRGDAVEVGRVLSTGSLWVDRSRVRRARSS 319          
BLAST of mRNA_L-elsbetiae_contig493.12889.1 vs. uniprot
Match: D8LI95_ECTSI (F-box domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI95_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 8.250e-37
Identity = 89/256 (34.77%), Postives = 131/256 (51.17%), Query Frame = 0
Query:  162 ACLPLHVLQFALEFVNLSENGVLCAVSKEFREAAEGDALWREAYKKRFPKKEA-EGGNALQGGPDASPDTSADASAGDDCAGGNGSDNEAAAASPVASVTELSVEVVKFSFKYLYKERIQDPHVGDHVEVVWKGKFRLESFEVYDGTAWWLAEVVDKGERPGF-YQVHYPGWEDKWDEWVPRDRLRWGNERLAAALEGIAPKKGDSVEMWCQGLHVPGAWLEAVVHRVEKERLYLGEVLTSGH--FWVDAEHVRLI 413
            A LP  +L  ++E +N+ + G +C V+K++R AAE DA+WR  + +RF +    + G A  G                                                 K L++ R++DP VGD VEV W+G+FRLES +V+ G +WW A VV K +  GF Y++HYPGW+  WDEWV RDRLRW    +  +      +  + VE+WC G HV GAWL+A V +++++++ L  VL S     WV    VR +
Sbjct:   27 AGLPRELLARSMELLNMVDLGQVCCVNKDWRNAAEEDAVWRFWWARRFREDPPPQRGRARAG-----------------------------------------------HLKQLHRYRLEDPLVGDKVEVSWEGRFRLESLDVFVGRSWWEATVVQKMD--GFKYKIHYPGWDSNWDEWVVRDRLRWP---VDPSYLSTTFRVREVVEVWCTGTHVKGAWLQARVRQIKQDQVSLKNVLASSPRTVWVPRSKVRRV 230          
BLAST of mRNA_L-elsbetiae_contig493.12889.1 vs. uniprot
Match: A0A7S2XXB7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXB7_9STRA)

HSP 1 Score: 101 bits (251), Expect = 3.240e-22
Identity = 43/94 (45.74%), Postives = 63/94 (67.02%), Query Frame = 0
Query:  324 YQVHYPGWEDKWDEWVPRDRLRWGNERLAAALEGIAPKKGDSVEMWCQGLHVPGAWLEAVVHRVEKERLYLGEVLTSGHFWVDAEHVRLIKQSR 417
            Y++HYPGW+ +WDEWVPR+RLRW        +E    +  D VE+WC G +VPGAWLEA V  ++ E++++G++L+SG  WV    VRL  + +
Sbjct:    1 YKIHYPGWDTRWDEWVPRNRLRWAMHHNP--MENF--QVNDRVEVWCTGSNVPGAWLEAQVKAIKGEQIFVGKMLSSGPLWVAKTRVRLCPKPK 90          
BLAST of mRNA_L-elsbetiae_contig493.12889.1 vs. uniprot
Match: D7G101_ECTSI (Tudor-knot domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G101_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 1.990e-19
Identity = 52/151 (34.44%), Postives = 71/151 (47.02%), Query Frame = 0
Query:  272 KYLYKERIQDPHVGDHVEVVWKGKFRLESFEVYDGTAWWLAEVV---------------DKGE---------------RPGFYQVHYPGWEDKWDEWVPRDRLRWGNERLAAALEGIAPKKGDSVE------MWCQGLHVPGAWLEAVVHR 386
            ++ ++ R+  P VGDHVEV WKGKFRL+   V+ G +WW A+VV               + GE               RP  + VHY  W  +WDEW+   R+RW  +    A    +   G  +E      +WC G    GAWLEA VH+
Sbjct:   57 RFAFRSRLACPVVGDHVEVAWKGKFRLDDCMVFVGLSWWDAKVVAVELGESLPCTTPDDEDGEDGRVDRRGATCMGERRPKRFLVHYRSWSRRWDEWLEPSRVRWARKMPTEACGQTSASAGPELEVDQEAELWCHGGSGGGAWLEARVHK 207          
BLAST of mRNA_L-elsbetiae_contig493.12889.1 vs. uniprot
Match: A0A6H5JY90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY90_9PHAE)

HSP 1 Score: 57.8 bits (138), Expect = 7.480e-7
Identity = 32/80 (40.00%), Postives = 45/80 (56.25%), Query Frame = 0
Query:  257 ASVTELSVEVVKFSFKYLYKERIQDPHVGDHVEVVWKGKFRLESFEVYDGTAWWLAEVVDKGER---------PGFYQVH 327
            A+ +E    +V+F+F+     R+  P +GDHVEV WKGKFRL+   V+ G +WW A+V   G R         PG  +VH
Sbjct:   31 AATSEGPSGMVRFAFR----SRLACPVLGDHVEVAWKGKFRLDDCMVFVGLSWWDAKVRHVGSRCCTVVSCAAPGETRVH 106          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig493.12889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D7FY36_ECTSI5.330e-11057.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZI68_9STRA2.740e-5641.50Tudor-knot domain-containing protein n=1 Tax=Tribo... [more]
W7T606_9STRA3.380e-5335.90F-box domain-containing protein n=1 Tax=Nannochlor... [more]
A0A4D9D060_9STRA5.540e-5138.30F-box domain-containing protein n=1 Tax=Nannochlor... [more]
A0A835ZFT0_9STRA2.020e-5038.35Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4A403_9STRA4.460e-4636.63Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
D8LI95_ECTSI8.250e-3734.77F-box domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S2XXB7_9STRA3.240e-2245.74Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D7G101_ECTSI1.990e-1934.44Tudor-knot domain-containing protein n=1 Tax=Ectoc... [more]
A0A6H5JY90_9PHAE7.480e-740.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.140coord: 278..354
e-value: 6.3E-11
score: 43.9
NoneNo IPR availableGENE3D1.20.1280.50coord: 144..277
e-value: 9.7E-6
score: 27.4
IPR025995RNA binding activity-knot of a chromodomainPFAMPF11717Tudor-knotcoord: 308..345
e-value: 3.3E-5
score: 23.7
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 158..221
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 281..351

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig493contigL-elsbetiae_contig493:3525..7933 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig493.12889.1mRNA_L-elsbetiae_contig493.12889.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig493 3525..7933 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig493.12889.1 ID=prot_L-elsbetiae_contig493.12889.1|Name=mRNA_L-elsbetiae_contig493.12889.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=465bp
FSPSTESEDIQHAAPGSMPVEWSKRSELLEWKNPWYSHGPGTPDGRSDPS
IFCSESAPRTASASCDSESVAAIAGAAGAAAAWTIALCALWGCRDAHDLE
ASLDFMGKVVLGLAPPEFGQAFSEFENAIQTKKQELGMKVFNPSVERLVM
SVASSFKQEITACLPLHVLQFALEFVNLSENGVLCAVSKEFREAAEGDAL
WREAYKKRFPKKEAEGGNALQGGPDASPDTSADASAGDDCAGGNGSDNEA
AAASPVASVTELSVEVVKFSFKYLYKERIQDPHVGDHVEVVWKGKFRLES
FEVYDGTAWWLAEVVDKGERPGFYQVHYPGWEDKWDEWVPRDRLRWGNER
LAAALEGIAPKKGDSVEMWCQGLHVPGAWLEAVVHRVEKERLYLGEVLTS
GHFWVDAEHVRLIKQSRAGEDGEEDQQEADGDVSAHRTSSMLLQALSDAG
FTGSTNSACCCSVM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025995Tudor-knot
IPR036047F-box-like_dom_sf
IPR016197Chromo-like_dom_sf