Homology
BLAST of mRNA_L-elsbetiae_contig491.12852.1 vs. uniprot
Match:
D7G7U4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7U4_ECTSI)
HSP 1 Score: 90.9 bits (224), Expect = 2.020e-21
Identity = 42/51 (82.35%), Postives = 46/51 (90.20%), Query Frame = 0
Query: 1 MPAAHQTRDAVSACWRALSEHQQFCRLTTPEKLQMINHRPLQPVAVHLMIE 51
MPAA +TR+AVSACWRALSEH+ FCRLTTPEKLQMINHRP Q VAVHL+ E
Sbjct: 58 MPAARETREAVSACWRALSEHEHFCRLTTPEKLQMINHRPSQAVAVHLVSE 108
BLAST of mRNA_L-elsbetiae_contig491.12852.1 vs. uniprot
Match:
K3X3I4_GLOUD (DNA-directed RNA polymerase III subunit RPC9 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3I4_GLOUD)
HSP 1 Score: 49.7 bits (117), Expect = 3.830e-5
Identity = 25/47 (53.19%), Postives = 35/47 (74.47%), Query Frame = 0
Query: 26 RLTTPEKLQMINHRPLQPVAVHLMIEDCHRRFRDDALVEELIALLEK 72
+LT EKLQ INH P++ V VHL++EDC RF +A +EELI ++E+
Sbjct: 78 QLTPAEKLQFINHIPVELVDVHLIVEDCAGRF-SEAQIEELIQIVEQ 123
BLAST of mRNA_L-elsbetiae_contig491.12852.1 vs. uniprot
Match:
A0A225VL34_9STRA (DNA-directed RNA polymerase III subunit RPC9 n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VL34_9STRA)
HSP 1 Score: 49.7 bits (117), Expect = 4.410e-5
Identity = 26/52 (50.00%), Postives = 37/52 (71.15%), Query Frame = 0
Query: 27 LTTPEKLQMINHRPLQPVAVHLMIEDCHRRFRDDALVEELIALLEKHVRAYL 78
LT+ EKLQ INH P++ V +HL+IEDC RF + V+ELI ++E+ + A L
Sbjct: 80 LTSAEKLQFINHIPMELVDIHLIIEDCAGRF-SETQVDELIRIVERTLGAEL 130
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig491.12852.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 3
M P A A H Q T R D A V S A C W R A L S E H Q Q F C R L T T P E K L Q M I N H R P L Q P V A V H L M I E D C H R R F R D D A L V E E L I A L L E K H V R A Y L H K Y Q W G C T S L S N G R G R S L Q T V P V W L G S A E S G E * 10 20 30 40 50 60 70 80 90 100 110 Expect = 2.02e-21 / Id = 82.35 Expect = 3.83e-5 / Id = 53.19 Expect = 4.41e-5 / Id = 50.00 Sequence D7G7U4_ECTSI K3X3I4_GLOUD A0A225VL34_9STRA
Match Name E-value Identity Description
D7G7U4_ECTSI 2.020e-21 82.35 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
K3X3I4_GLOUD 3.830e-5 53.19 DNA-directed RNA polymerase III subunit RPC9 n=1 T... [more]
A0A225VL34_9STRA 4.410e-5 50.00 DNA-directed RNA polymerase III subunit RPC9 n=1 T... [more]
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InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
M P A A H Q T R D A V S A C W R A L S E H Q Q F C R L T T P E K L Q M I N H R P L Q P V A V H L M I E D C H R R F R D D A L V E E L I A L L E K H V R A Y L H K Y Q W G C T S L S N G R G R S L Q T V P V W L G S A E S G E * 10 20 30 40 50 60 70 80 90 100 110 Expect = 3.8E-12 / Score = 48.2 Expect = 4.1E-10 / Score = 40.0 Score = Score = Sequence G3DSA:1.20.1250.40 PF03874 PTHR15561 SSF47819
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_L-elsbetiae_contig491.12852.1 ID=prot_L-elsbetiae_contig491.12852.1|Name=mRNA_L-elsbetiae_contig491.12852.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=111bp MPAAHQTRDAVSACWRALSEHQQFCRLTTPEKLQMINHRPLQPVAVHLMI EDCHRRFRDDALVEELIALLEKHVRAYLHKYQWGCTSLSNGRGRSLQTVP VWLGSAESGE* back to top
Annotated Terms
The following terms have been associated with this polypeptide: