prot_L-elsbetiae_contig4896.12820.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4896.12820.1
Unique Nameprot_L-elsbetiae_contig4896.12820.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length547
Homology
BLAST of mRNA_L-elsbetiae_contig4896.12820.1 vs. uniprot
Match: A0A6H5L316_9PHAE (SHSP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L316_9PHAE)

HSP 1 Score: 342 bits (878), Expect = 1.840e-108
Identity = 277/571 (48.51%), Postives = 333/571 (58.32%), Query Frame = 0
Query:   18 KAAAVAALSAMMAFNVCPAEAFQPFLVVPSSRMMHRSPSFSSTLAPAA-VTMDCTPWDVECYGVHPLGSRIG---GLQW------------RRQMKQQQP--GRVIFAPEDLFQGPAVRPQQEFAVSDPTVTQDTDDLYTLTFDLPADVDHDGLEVSVSGRLLTVKACVTREGDNGPSATRGGWVTRPSRMDSVSRSFVLPEGLSESGATASLFSNGKAEVKFAKDQAVGG-AAATATTATAPSKADPTVPANKAAAAPASSYAEYLAGLSGALRSAVAAAATAGDDAPAAAGTLTASS----------------TAGTPASGVEQPASLSDSPFDALDQEFREFAKAMWGEEAVEPPQIPTQEELAEKATAAKEARAKREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRENQVVAMRRATMASDVSKAEDGSSYVVKVALPEGVTRDTVKLTANPNSSLRVTVSA--TAAEG-GRSIYKDVFLPKDGVIEEISAKFEAEQ-QDDRNTKNKEG---VAGASDVSGADAVSGLEVTVGRAAAPQPKTISIL 546
            KAA  AAL  ++  +    +AF    + PS   MHRS S SST  P   VTMDC PWD+ECYGVHP GS  G   G++              R +++ +P  G +IFAP +   G A    Q   V DP V  +T+DLYTL FDLPA VDHDGLEVSVS RLLTVKA +TRE +  P  TRGGWVTR SR+DSVSRSFVLPEGL ES ATASL S GKAEV+F KD++V G AA+TA     PS       A    AAP SS                   A AG   P  +   TA +                 A TPA+  E   S    PF+A+DQEFREFAKAMWGE  +E  Q+PTQEELAE+A  A+EA  KR                                    XXXXXXXXXXXXXX   +V+AMRRATMA+++S +E+GSSYVV+ ALPEG TR+ VKLT NP++S+RV VSA  TAA G  R +YKDV LPKD ++ EISAKFEAEQ +D + T  +EG    AG    +   AV+G+EVTVG+A+ PQPK + IL
Sbjct:    4 KAATAAALIMLLDSS----QAFTSTFLSPSKLAMHRSTSPSSTAVPTTTVTMDCGPWDLECYGVHPFGSERGRGRGVRXXXXXXXXXXXRRNRGIQRYRPSFGPMIFAPSE---GQA---NQHLQVGDPAVILETNDLYTLAFDLPAGVDHDGLEVSVSDRLLTVKASITREQEADPFITRGGWVTRSSRVDSVSRSFVLPEGLVESSATASL-SEGKAEVRFNKDKSVRGEAASTAAPPITPSTTGTAASAGDTTAAPTSS-------------------ADAGRTPPTDSTGSTAVAEXXXXXXXXXXXXPVDAASTPAASTEPRPSRPTFPFEAVDQEFREFAKAMWGEHVLERLQVPTQEELAEQAAMAREAWTKR------------------------------------XXXXXXXXXXXXXXXXKRVLAMRRATMAANISLSEEGSSYVVRFALPEGTTREDVKLTVNPSNSIRVAVSARSTAAAGPDRPVYKDVVLPKDAILSEISAKFEAEQHRDGKGTIEEEGEEATAGGGGATKEGAVAGVEVTVGKASPPQPKHVEIL 508          
BLAST of mRNA_L-elsbetiae_contig4896.12820.1 vs. uniprot
Match: D8LP10_ECTSI (SHSP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP10_ECTSI)

HSP 1 Score: 342 bits (877), Expect = 2.840e-108
Identity = 270/576 (46.88%), Postives = 322/576 (55.90%), Query Frame = 0
Query:   23 AALSAMMAFNVCPAEAFQPFLVVPSSRMMHRSPSFSSTLAPAA-VTMDCTPWDVECYGVHPLGSRIG-----------GLQWRRQMKQQQP--GRVIFAPEDLFQGPAVRPQQEFAVSDPTVTQDTDDLYTLTFDLPADVDHDGLEVSVSGRLLTVKACVTREGDNGPSATRGGWVTRPSRMDSVSRSFVLPEGLSESGATASLFSNGKAEVKFAKDQAVGG-AAATATTATAPSKADPTVPANKAAAAPASSYAEYLAGLSGALRSAVAAAATAGDDAPAAAGTLTASSTAGTPASGV-----------------------EQPASLSDSPFDALDQEFREFAKAMWGEEAVEPPQIPTQEELAEKATAAKEARAKREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRENQVVAMRRATMASDVSKAEDGSSYVVKVALPEGVTRDTVKLTANPNSSLRVTVSATAAEGG----------RSIYKDVFLPKDGVIEEISAKFEAEQQDDRNTKNKEG----VAGASDVSGADAVSGLEVTVGRAAAPQPKTISIL 546
            AA +A +   +  ++AF      PS   MHRSPS SST  P   VTMDC+PWD+ECYGV P G   G               +R M++ +P  G +IFAP +       +P Q   V DP +  +TDDLY L FDLPA VDHDGL+VSVS RLLTVKA +TRE +  P  TRGGWVTR SR+DSVSRSFVLPEGL ES ATASL +  KAEV+F KD++V G AA+TA     PS       A    AAPASS                   A AG        T    ST   P                           E   S   SPF+A+DQEFREFAKAMWGE+ +E  Q+PTQEELAE+A  A+EA AKREAXXXXXXXXXXXXXXX                                    +V+AMRRATMA+D+S +EDGSSYVV+ ALPEG TR+ VKLT NP+ S+RV VSAT+              RS+YKDV LPKD ++ EISAKFEAEQ  D     +EG     AG    +   AV+G+EVTVG+A+ PQPK + IL
Sbjct:    5 AATAATLIMLLDSSQAFTSSFFSPSKLAMHRSPSSSSTAVPTTTVTMDCSPWDLECYGVDPFGRERGRGRGGXXXXXXXXXRKRGMQRYRPSFGPMIFAPSEG------QPNQHLRVGDPVIILETDDLYALAFDLPAGVDHDGLDVSVSDRLLTVKASITREQEADPFTTRGGWVTRSSRVDSVSRSFVLPEGLVESSATASL-AESKAEVRFNKDKSVRGEAASTAAPPVTPSTTGTVASAGDTTAAPASS-------------------ADAGR-------TPLTDSTGSXPXXXXXXXXXXXXXXXXXXXXXXXXXXXEPRPSRPASPFEAVDQEFREFAKAMWGEDVLERLQVPTQEELAEQAAMAREAWAKREAXXXXXXXXXXXXXXX------------------------------------RVLAMRRATMAADISLSEDGSSYVVRFALPEGTTREDVKLTVNPSKSIRVAVSATSXXXXXXXXXXXXPDRSVYKDVALPKDAILSEISAKFEAEQHPDEKGNAEEGGEKATAGGGGATKEGAVAGVEVTVGKASPPQPKNVEIL 511          
BLAST of mRNA_L-elsbetiae_contig4896.12820.1 vs. uniprot
Match: D7FTP7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTP7_ECTSI)

HSP 1 Score: 105 bits (263), Expect = 8.230e-21
Identity = 147/464 (31.68%), Postives = 197/464 (42.46%), Query Frame = 0
Query:  104 VIFAPEDLFQGPAVRPQQEFAVSDPTVTQDTDDLYTLTFDLPADVDHDGLEVSVSGRLLTVKACVTRE---------GDNGPSATRGGWVTR-PSRMDSVSRSFVLPEGLSESGATASLFSNGKAEVKFAK----DQAVGGAAATATTATAPSKADPTVPANKAAAAPA--SSYAEYLAG--LSGALRSAVAAAATAGDDAPAAAGTLTASSTAGTPASGVEQPASLSDSPFDALDQEFREFAKAMW-GEEAVEPPQIPTQEELAEKATAAKEARAKREAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRENQVVAMRRATMASDVSKAEDGSSYVVKVALPEGVTRDTVKLTANP-NSSLRVTVSATAAEGGRSIYKDVFLPKDGVIEEISAKFEAEQQDDRNTKNKEGVAGASDVSGADA--VSGLEVTVGRAAAPQPKTISI 545
            V   P DL   P V  +    + DP V ++TD  Y LTF+LP+ +   GLEVSVSGRLLTV+A  TRE          D G   ++G  +TR  ++ ++ +RSF LP+ +S    TAS  ++ +  +   K    D    G      +    S   P    +     P+  SS AEYL G  L G                                       ASL  S    LD EFR   + MW G+ +V   + PT+E++     AA  ARA++E                                                 R+  V A+RRATMA+DVS+ E    YVVK ALP+G TRD V+L   P N+ LRV   A   EG   + K V LP D    +ISA+F  E +     + + G AG     G  +  V+GLEV VGRAA   PK+I I
Sbjct:   88 VAHPPFDL---PLVLEECPMCIPDPEV-RETDAGYALTFNLPSGISDTGLEVSVSGRLLTVEARTTREENHDVISKSADKGSEGSKGWVMTRCTTKTNAAARSFTLPDSVSNE-VTASWGNDNQVVINLTKVAHYDPVNAGGMNNVFSTMEDSGVVPVERRHGDDQHPSASSSAAEYLYGSKLDG---------------------------------------ASLKPSSILELDLEFRSLVRDMWHGDGSV---RFPTEEQV-----AATVARARKE-------------------------------------------------RKKIVKALRRATMATDVSEKE--LEYVVKFALPQGATRDDVELMVTPDNNGLRV---AFFGEGNHMVSKAVCLPSDASFSDISARFTPEPR----KRGRGGAAGGGLEGGKKSRNVAGLEVAVGRAAPQLPKSIEI 441          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4896.12820.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L316_9PHAE1.840e-10848.51SHSP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8LP10_ECTSI2.840e-10846.88SHSP domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FTP7_ECTSI8.230e-2131.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 375..413
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 39..546
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 19..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..38
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 133..226
e-value: 5.6E-5
score: 23.2
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 116..244
e-value: 1.1E-9
score: 39.8
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 132..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4896contigL-elsbetiae_contig4896:9541..12572 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4896.12820.1mRNA_L-elsbetiae_contig4896.12820.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4896 8977..12744 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4896.12820.1 ID=prot_L-elsbetiae_contig4896.12820.1|Name=mRNA_L-elsbetiae_contig4896.12820.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=547bp
MTEKMSSNSSLSIKKAPKAAAVAALSAMMAFNVCPAEAFQPFLVVPSSRM
MHRSPSFSSTLAPAAVTMDCTPWDVECYGVHPLGSRIGGLQWRRQMKQQQ
PGRVIFAPEDLFQGPAVRPQQEFAVSDPTVTQDTDDLYTLTFDLPADVDH
DGLEVSVSGRLLTVKACVTREGDNGPSATRGGWVTRPSRMDSVSRSFVLP
EGLSESGATASLFSNGKAEVKFAKDQAVGGAAATATTATAPSKADPTVPA
NKAAAAPASSYAEYLAGLSGALRSAVAAAATAGDDAPAAAGTLTASSTAG
TPASGVEQPASLSDSPFDALDQEFREFAKAMWGEEAVEPPQIPTQEELAE
KATAAKEARAKREAEVAVRTKAAEEAKAKREAEFAQRVKAAEEAKAKREA
EFAERVKAAKEARENQVVAMRRATMASDVSKAEDGSSYVVKVALPEGVTR
DTVKLTANPNSSLRVTVSATAAEGGRSIYKDVFLPKDGVIEEISAKFEAE
QQDDRNTKNKEGVAGASDVSGADAVSGLEVTVGRAAAPQPKTISIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002068A-crystallin/Hsp20_dom
IPR008978HSP20-like_chaperone