prot_L-elsbetiae_contig4857.12765.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig4857.12765.1
Unique Name	prot_L-elsbetiae_contig4857.12765.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	194

Homology

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BLAST of mRNA_L-elsbetiae_contig4857.12765.1 vs. uniprot
Match: D7G389_ECTSI (Ras-related protein Rab n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G389_ECTSI)

HSP 1 Score: 357 bits (916), Expect = 5.760e-123
Identity = 177/189 (93.65%), Postives = 183/189 (96.83%), Query Frame = 0

Query:    6 ASAVTVKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQASDRFGSIARAYYKEALGAILVYDIGRSSSFETVPRWKGEIDEKVRLPDGGKLPVVLLANKCDLDLPIDREALNWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVLEIIPASGHPSGRLGMKV 194
            A+AVTVKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQ  DRFGSIARAYYKEALGA+LVYDIGRSSSF+TV RWKGEIDEKVRLPDGG+LPVVLLANKCDLD+PIDREAL WFCDRHGFAGWFETSAKQNINIDE SRFLVEKVLE IPASGHPSGRLGMK+
Sbjct:   75 AAAVTVKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQ--DRFGSIARAYYKEALGALLVYDIGRSSSFKTVQRWKGEIDEKVRLPDGGRLPVVLLANKCDLDIPIDREALTWFCDRHGFAGWFETSAKQNINIDEGSRFLVEKVLERIPASGHPSGRLGMKL 261

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BLAST of mRNA_L-elsbetiae_contig4857.12765.1 vs. uniprot
Match: A0A6V1S8I5_HETAK (Ras-related protein Rab n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1S8I5_HETAK)

HSP 1 Score: 238 bits (608), Expect = 3.990e-77
Identity = 116/170 (68.24%), Postives = 138/170 (81.18%), Query Frame = 0

Query:   10 TVKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQASDRFGSIARAYYKEALGAILVYDIGRSSSFETVPRWKGEIDEKVRLPDGGKLPVVLLANKCDLD-LPIDREALNWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVLE 178
            T KVLVLGDPATGKTSIIKRYVH+FFS HHKTTVGVDFALK L V  T VK+QLWDIAGQ  DRFG IAR YYK++ GA++VYD  R  +F+TV +WK EID+KV+LPDG  +P+VLLANKCDLD   +D+  L+ FC  HGF GWF+TSA+ NINI++A RFLV+ +LE
Sbjct:    9 TWKVLVLGDPATGKTSIIKRYVHNFFSDHHKTTVGVDFALKALNVNGTEVKMQLWDIAGQ--DRFGVIARTYYKDSYGALIVYDASRPPTFDTVEKWKREIDDKVKLPDGSNIPIVLLANKCDLDKAEVDKSYLDQFCQEHGFIGWFDTSARLNINIEQACRFLVDNLLE 176

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BLAST of mRNA_L-elsbetiae_contig4857.12765.1 vs. uniprot
Match: A0A7S2S186_9STRA (Ras-related protein Rab n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S186_9STRA)

HSP 1 Score: 234 bits (597), Expect = 2.970e-75
Identity = 116/168 (69.05%), Postives = 139/168 (82.74%), Query Frame = 0

Query:   12 KVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQASDRFGSIARAYYKEALGAILVYDIGRSSSFETVPRWKGEIDEKVRLPDGGKLPVVLLANKCDLD-LPIDREALNWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVLE 178
            KVLVLGDPATGKTSIIKRYVH+FFS HH+TTVGVDFALKQL V +  V+LQLWDIAGQ  DRFG+I+R YYK+ALGA LVYD+ R ++F+TV +WKGEID KV LP+   LPVVLLANKCD++ + ID +AL+ FC+ HGF  WFETSAK +  ID A+RFL+E +LE
Sbjct:   10 KVLVLGDPATGKTSIIKRYVHNFFSNHHRTTVGVDFALKQLTVRNQLVRLQLWDIAGQ--DRFGAISRVYYKDALGAFLVYDLARPATFDTVVKWKGEIDAKVVLPNHEPLPVVLLANKCDIEGVKIDSDALDKFCEEHGFIAWFETSAKTDHKIDAAARFLLENILE 175

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BLAST of mRNA_L-elsbetiae_contig4857.12765.1 vs. uniprot
Match: A0A7S2APD4_9STRA (Ras-related protein Rab n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2APD4_9STRA)

HSP 1 Score: 233 bits (594), Expect = 1.170e-74
Identity = 118/167 (70.66%), Postives = 134/167 (80.24%), Query Frame = 0

Query:   12 KVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQASDRFGSIARAYYKEALGAILVYDIGRSSSFETVPRWKGEIDEKVRLPDGGKLPVVLLANKCDL-DLPIDREALNWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVL 177
            KVLVLGDPATGKTSIIKRYVH+FFS HH+TTVGVDFALKQL V +T V+LQLWDIAGQ  DRFG+IAR YYK+A GA LVYD+ R  +FETV +WK EID KV LP+G  LPVVLLANKCD+  + +D   LN FC+ HGF  WFETSAK    ID A+RFLVEK+L
Sbjct:   29 KVLVLGDPATGKTSIIKRYVHNFFSNHHRTTVGVDFALKQLQVYNTVVRLQLWDIAGQ--DRFGAIARVYYKDAFGAFLVYDLSRQRTFETVSKWKKEIDAKVVLPNGHPLPVVLLANKCDIAGVELDAAELNRFCEDHGFVAWFETSAKTAHKIDAAARFLVEKIL 193

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BLAST of mRNA_L-elsbetiae_contig4857.12765.1 vs. uniprot
Match: A0A7S2V4T6_9STRA (Ras-related protein Rab n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4T6_9STRA)

HSP 1 Score: 231 bits (588), Expect = 4.090e-74
Identity = 118/168 (70.24%), Postives = 135/168 (80.36%), Query Frame = 0

Query:   12 KVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQASDRFGSIARAYYKEALGAILVYDIGRSSSFETVPRWKGEIDEKVRLPDGGKLPVVLLANKCDLD-LPIDREALNWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVLE 178
            KVLVLGDPATGKTSIIKRYVH+FFS HHKTTVGVDFALKQL V  T V+LQLWDIAGQ  DRFG+IAR YYK+A GA+LVYD+ R  +FE V +WK EID KV LP+G  +PVVLL NK DL+   +D E L+ FC +HGF GWF+TSAK N NI EA+ FLVEK+LE
Sbjct:   11 KVLVLGDPATGKTSIIKRYVHNFFSTHHKTTVGVDFALKQLHVRGTDVRLQLWDIAGQ--DRFGAIARVYYKDAFGAMLVYDVTRPPTFEMVSKWKEEIDTKVSLPNGEPIPVVLLGNKSDLEKAKVDTEYLDEFCKQHGFVGWFDTSAKTNQNIVEAATFLVEKILE 176

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BLAST of mRNA_L-elsbetiae_contig4857.12765.1 vs. uniprot
Match: F0YEW4_AURAN (Ras-related protein Rab (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YEW4_AURAN)

HSP 1 Score: 229 bits (585), Expect = 4.630e-74
Identity = 119/179 (66.48%), Postives = 135/179 (75.42%), Query Frame = 0

Query:   12 KVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVG-------------------DTTVKLQLWDIAGQASDRFGSIARAYYKEALGAILVYDIGRSSSFETVPRWKGEIDEKVRLPDGGKLPVVLLANKCDL-DLPIDREALNWFCDRHGFAGWFETSAKQNINIDEASR 170
            KVLVLGDPATGKTSIIKRYVH+FFS HH+TTVGVDFALKQL VG                   DTTV+LQLWDIAGQ  DRFG+IAR YYK+A GA LVYDI R  +F+T+ +WK EID KV LP+G  LPVVLLANKCDL D+ IDR+ L+ FC  HGF GWFETSAK ++NID A+R
Sbjct:    1 KVLVLGDPATGKTSIIKRYVHNFFSNHHRTTVGVDFALKQLTVGRRAGAARVPPRVATARDRRDTTVRLQLWDIAGQ--DRFGAIARVYYKDAFGAFLVYDISRPETFKTIVKWKDEIDSKVHLPNGMALPVVLLANKCDLEDVAIDRQELDDFCRSHGFIGWFETSAKADVNIDTAAR 177

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BLAST of mRNA_L-elsbetiae_contig4857.12765.1 vs. uniprot
Match: K3WGR3_GLOUD (Ras-related protein Rab n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WGR3_GLOUD)

HSP 1 Score: 223 bits (568), Expect = 6.390e-71
Identity = 110/168 (65.48%), Postives = 132/168 (78.57%), Query Frame = 0

Query:   11 VKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQASDRFGSIARAYYKEALGAILVYDIGRSSSFETVPRWKGEIDEKVRLPDGGKLPVVLLANKCDLDLPIDREALNWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVLE 178
            +KVLVLGD ATGKTSIIKRYVHD FS HH+TT+GVDFALK + V  TTV+LQLWDIAGQ  + F ++ R YYK+ALGA+LVYDI R  +FE+V +WK EID KV LP+   LPV+L  NKCDL   IDR  L+ FC+ +GFAGWFETSAK+N NID+AS+ LV  +LE
Sbjct:   14 IKVLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVTVNGTTVRLQLWDIAGQ--EHFRALNRVYYKDALGALLVYDISRPETFESVIKWKKEIDSKVELPNNKPLPVILCGNKCDLSGDIDRGFLDAFCETNGFAGWFETSAKENKNIDDASKALVNSILE 179

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BLAST of mRNA_L-elsbetiae_contig4857.12765.1 vs. uniprot
Match: A0A8K1C4T0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4T0_PYTOL)

HSP 1 Score: 221 bits (562), Expect = 5.550e-70
Identity = 107/168 (63.69%), Postives = 132/168 (78.57%), Query Frame = 0

Query:   11 VKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQASDRFGSIARAYYKEALGAILVYDIGRSSSFETVPRWKGEIDEKVRLPDGGKLPVVLLANKCDLDLPIDREALNWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVLE 178
            +KVLVLGD ATGKTSIIKRYVHD F+ HH+TT+GVDFALK + V  TTV+LQLWDIAGQ  + F ++ R YYK++LGA+LVYDI R  +FE+V +WK EID KV LP+   LPV+L  NKCDL   +DR  L+ FC+ +GFAGWFETSAK+N NIDEA++ LV  +LE
Sbjct:   14 IKVLVLGDAATGKTSIIKRYVHDAFTEHHRTTIGVDFALKAVTVNGTTVRLQLWDIAGQ--EHFRALNRVYYKDSLGALLVYDISRPETFESVIKWKKEIDSKVELPNNKPLPVILCGNKCDLSGDVDRAFLDAFCETNGFAGWFETSAKENKNIDEAAKALVSSILE 179

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BLAST of mRNA_L-elsbetiae_contig4857.12765.1 vs. uniprot
Match: H3HAQ4_PHYRM (Ras-related protein Rab n=17 Tax=Peronosporaceae TaxID=4777 RepID=H3HAQ4_PHYRM)

HSP 1 Score: 218 bits (554), Expect = 9.090e-69
Identity = 105/168 (62.50%), Postives = 132/168 (78.57%), Query Frame = 0

Query:   11 VKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQASDRFGSIARAYYKEALGAILVYDIGRSSSFETVPRWKGEIDEKVRLPDGGKLPVVLLANKCDLDLPIDREALNWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVLE 178
            +KVLVLGD ATGKTSIIKRYVHD FS HH+TT+GVDFALK + V  TTV+LQLWDIAGQ  + F ++ R YYK+ALGA+LVYD+ R  +F++V +WK EID KV LP+G  LPV+L  NKCDL   +DRE L+ FC  + F GWF+TSAK+NI+ID+A++ LV  +LE
Sbjct:   14 IKVLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVTVNGTTVRLQLWDIAGQ--EHFRALNRVYYKDALGALLVYDMSRPETFDSVLKWKKEIDSKVELPNGKPLPVILCGNKCDLKEDVDREFLDEFCKTNNFTGWFDTSAKENIHIDDAAKALVTGILE 179

[Close]

BLAST of mRNA_L-elsbetiae_contig4857.12765.1 vs. uniprot
Match: W2QJV6_PHYPN (Ras-related protein Rab n=3 Tax=Peronosporaceae TaxID=4777 RepID=W2QJV6_PHYPN)

HSP 1 Score: 216 bits (550), Expect = 3.680e-68
Identity = 103/168 (61.31%), Postives = 133/168 (79.17%), Query Frame = 0

Query:   11 VKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALKQLVVGDTTVKLQLWDIAGQASDRFGSIARAYYKEALGAILVYDIGRSSSFETVPRWKGEIDEKVRLPDGGKLPVVLLANKCDLDLPIDREALNWFCDRHGFAGWFETSAKQNINIDEASRFLVEKVLE 178
            +KVLVLGD ATGKTSIIKRYVHD FS HH+TT+GVDFALK + V  TTV+LQLWDIAGQ  + F ++ R YYK+ALGA+LVYD+ R  +F+++ +WK EID KV LP+G  LPV+L  NKCDL   +DRE L+ FC+ + F GWF+TSAK+NI+ID+A++ LV  +L+
Sbjct:   14 IKVLVLGDAATGKTSIIKRYVHDAFSEHHRTTIGVDFALKAVTVSGTTVRLQLWDIAGQ--EHFRALNRVYYKDALGALLVYDMSRPETFDSILKWKKEIDSKVELPNGKTLPVILCGNKCDLKEYVDREFLDEFCNTNNFTGWFDTSAKENIHIDDAAKALVTGILQ 179

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig4857.12765.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig4857.12765.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G389_ECTSI	5.760e-123	93.65	Ras-related protein Rab n=1 Tax=Ectocarpus silicul...	[more]
A0A6V1S8I5_HETAK	3.990e-77	68.24	Ras-related protein Rab n=1 Tax=Heterosigma akashi...	[more]
A0A7S2S186_9STRA	2.970e-75	69.05	Ras-related protein Rab n=1 Tax=Rhizochromulina ma...	[more]
A0A7S2APD4_9STRA	1.170e-74	70.66	Ras-related protein Rab n=1 Tax=Dictyocha speculum...	[more]
A0A7S2V4T6_9STRA	4.090e-74	70.24	Ras-related protein Rab n=1 Tax=Fibrocapsa japonic...	[more]
F0YEW4_AURAN	4.630e-74	66.48	Ras-related protein Rab (Fragment) n=1 Tax=Aureoco...	[more]
K3WGR3_GLOUD	6.390e-71	65.48	Ras-related protein Rab n=2 Tax=Pythiaceae TaxID=4...	[more]
A0A8K1C4T0_PYTOL	5.550e-70	63.69	Uncharacterized protein n=1 Tax=Pythium oligandrum...	[more]
H3HAQ4_PHYRM	9.090e-69	62.50	Ras-related protein Rab n=17 Tax=Peronosporaceae T...	[more]
W2QJV6_PHYPN	3.680e-68	61.31	Ras-related protein Rab n=3 Tax=Peronosporaceae Ta...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 34..50 score: 28.36 coord: 11..32 score: 34.8 coord: 52..74 score: 37.47 coord: 120..133 score: 41.66 coord: 154..176 score: 32.89
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 13..175 e-value: 3.0E-7 score: -25.3
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 16..190 e-value: 0.0052 score: -5.1
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 8..179 e-value: 3.3E-10 score: 29.2
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 11..179 e-value: 2.1E-59 score: 213.3
None	No IPR available	GENE3D	3.40.50.300		coord: 8..179 e-value: 2.0E-49 score: 169.5
None	No IPR available	PANTHER	PTHR24073:SF897	RAB38C, MEMBER OF RAS ONCOGENE FAMILY-RELATED	coord: 8..177
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 8..177
None	No IPR available	PROSITE	PS51419	RAB	coord: 6..194 score: 27.852
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 10..171 e-value: 1.2E-19 score: 68.7
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 12..177 e-value: 8.7E-40 score: 136.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 10..181

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig4857	contig	L-elsbetiae_contig4857:9086..13359 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig4857.12765.1	mRNA_L-elsbetiae_contig4857.12765.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig4857 2476..13359 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig4857.12765.1 ID=prot_L-elsbetiae_contig4857.12765.1|Name=mRNA_L-elsbetiae_contig4857.12765.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=194bp
MSGGVASAVTVKVLVLGDPATGKTSIIKRYVHDFFSGHHKTTVGVDFALK
QLVVGDTTVKLQLWDIAGQASDRFGSIARAYYKEALGAILVYDIGRSSSF
ETVPRWKGEIDEKVRLPDGGKLPVVLLANKCDLDLPIDREALNWFCDRHG
FAGWFETSAKQNINIDEASRFLVEKVLEIIPASGHPSGRLGMKV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase
IPR027417	P-loop_NTPase