prot_L-elsbetiae_contig4856.12764.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig4856.12764.1
Unique Name	prot_L-elsbetiae_contig4856.12764.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	309

Homology

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BLAST of mRNA_L-elsbetiae_contig4856.12764.1 vs. uniprot
Match: A0A6H5KW87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW87_9PHAE)

HSP 1 Score: 288 bits (736), Expect = 5.250e-93
Identity = 171/229 (74.67%), Postives = 182/229 (79.48%), Query Frame = 0

Query:   70 QTQWLIMSKNVAQARCKELESQLASTREELTKRDTSVKVAQEKIRHLEAESKGLMAAAEFREKEACSMQEGASLAQERAHAHEKALAGALEQLSDSGVSQSKKLEELADVSDELKRTKAALERAERLVFDQRREADERLADENRRRTETETLRAKLTRVERKNTELMAKQAAGRLAKRMRGNFGRSSTFCASFCSCFRGRPAYRRVASPAPFPAHGSTSSTESPWLGEE 298
            Q +WL M K  A++RC  LE  L S + EL KRDTS+KVA EKIRHLEAES  L+AAAE REKEACSMQE A              A ALEQLSDSGVSQSKKL ELADV+ ELKRTKAALERAERLVFDQRREADER  DE+RRR ETE LR KLTRVERKNTELMAKQAAGRLAKRMRGNFGRSSTFCASFCSCFRG+PAYRRVASPAPF     +S  +SPWLGEE
Sbjct:   74 QEEWLHMGKQAAESRCIALEGDLQSIKSELAKRDTSIKVAHEKIRHLEAESSDLLAAAEVREKEACSMQEKAXXXXXXXXXXXXXXASALEQLSDSGVSQSKKLAELADVTQELKRTKAALERAERLVFDQRREADERQCDEDRRRAETEALRDKLTRVERKNTELMAKQAAGRLAKRMRGNFGRSSTFCASFCSCFRGKPAYRRVASPAPFAPPLGSSPGDSPWLGEE 302

[Close]

BLAST of mRNA_L-elsbetiae_contig4856.12764.1 vs. uniprot
Match: D8LU91_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU91_ECTSI)

HSP 1 Score: 281 bits (720), Expect = 8.120e-92
Identity = 168/226 (74.34%), Postives = 179/226 (79.20%), Query Frame = 0

Query:   76 MSKNVAQARCKELESQLASTREELTKRDTSVKVAQEKIRHLEAESKGLMAAAEFREKEACSMQEGASLAQERAHAHEKALAGALEQLSDSGVSQSKKLEELADVSDELKRTKAALERAERLVFDQRREADERLADENRRRTETETLRAKLTRVERKNTELMAKQAAGRLAKRMRGNFGRSSTFCASFCSCFRGRPAYRRVASPAPFPAHGSTSSTESPWLGEEAAA 301
            M K  A++RC  L+  L S + EL KRDTS+KVAQEKIRHLEAES GL+AAAEFREKEACSMQE A              A ALEQLSDSGVSQSKKL ELADV+ ELK TKAALERAERLVFDQRREADER  DE+RRR ETE LR KLTRVERKNTELMAKQAAGRLAKRMRGNFGRSSTFCA FCSCFRG+PAYRRVASPAPF     +S  + PWLGEE  A
Sbjct:    1 MGKQAAESRCIALKGDLQSIKSELAKRDTSIKVAQEKIRHLEAESSGLLAAAEFREKEACSMQEKAXXXXXXXXXXXXXXASALEQLSDSGVSQSKKLAELADVTQELKLTKAALERAERLVFDQRREADERQRDEDRRRAETEALRDKLTRVERKNTELMAKQAAGRLAKRMRGNFGRSSTFCALFCSCFRGKPAYRRVASPAPFAPPPGSSPGDIPWLGEETVA 226

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig4856.12764.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig4856.12764.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KW87_9PHAE	5.250e-93	74.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LU91_ECTSI	8.120e-92	74.34	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 173..203
None	No IPR available	COILS	Coil	Coil	coord: 218..238
None	No IPR available	COILS	Coil	Coil	coord: 106..126
None	No IPR available	COILS	Coil	Coil	coord: 78..98

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig4856	contig	L-elsbetiae_contig4856:4273..12426 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig4856.12764.1	mRNA_L-elsbetiae_contig4856.12764.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig4856 4131..12565 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig4856.12764.1 ID=prot_L-elsbetiae_contig4856.12764.1|Name=mRNA_L-elsbetiae_contig4856.12764.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=309bp
MLTEQQPTELRDGRDNSSSSSEMTMAAPHKSADIPPSAASTGGGGGGAAA
GGSESAGGGEAAEEKPSVEQTQWLIMSKNVAQARCKELESQLASTREELT
KRDTSVKVAQEKIRHLEAESKGLMAAAEFREKEACSMQEGASLAQERAHA
HEKALAGALEQLSDSGVSQSKKLEELADVSDELKRTKAALERAERLVFDQ
RREADERLADENRRRTETETLRAKLTRVERKNTELMAKQAAGRLAKRMRG
NFGRSSTFCASFCSCFRGRPAYRRVASPAPFPAHGSTSSTESPWLGEEAA
AAGPLRGF*