prot_L-elsbetiae_contig4855.12763.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4855.12763.1
Unique Nameprot_L-elsbetiae_contig4855.12763.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length359
Homology
BLAST of mRNA_L-elsbetiae_contig4855.12763.1 vs. uniprot
Match: D7FLW1_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLW1_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 1.670e-9
Identity = 54/106 (50.94%), Postives = 63/106 (59.43%), Query Frame = 0
Query:  105 RRSARAAGSRQPNYAESPTREPSKRQRKASVPATGA--GNDGRGAP-ETPQKPTGAVALREGGRWQ-ECGYSGCTTIPSFAMAGSKKREYCSKHAKQGMVNVKSKR 206
            R SA  A SRQPN+AES +   SKRQRK S P T A  G+ G  A  +T  K +  V  R  GR Q  C   GC+  PS+    SKK E+CS+HAKQGMVNV  KR
Sbjct:  183 RYSAWTASSRQPNHAESDS---SKRQRKGSAPGTKAQCGSGGAAAAHKTATKLSTPVIARHRGRGQPSCEEIGCSMRPSYGKDNSKKAEFCSQHAKQGMVNVVHKR 285          
BLAST of mRNA_L-elsbetiae_contig4855.12763.1 vs. uniprot
Match: A0A6H5J913_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J913_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 6.540e-8
Identity = 52/112 (46.43%), Postives = 61/112 (54.46%), Query Frame = 0
Query:   92 GKRKLRHHGKSPRRRSARAAGSRQPNYAESPTREPSKRQRKASVPATGAGNDGRGAPETPQKPTGAVALREG-GRWQECGYSGCTTIPSFAMAGSKKREYCSKHAKQGMVNV 202
            GKRKL    K   + S   AGSR PN AESP  EPSKRQRKA    T       GA    +  T  +A R   G+ + C    CTT PS+  A  KK E+C +HAKQGM+NV
Sbjct:  150 GKRKLWGTAKGLPQCSVPTAGSRPPNVAESPKIEPSKRQRKAPELETAGKCGDVGAAAGIRMSTRMIARRHRQGQRRSCQEPECTTWPSYG-ARLKKAEFCKRHAKQGMINV 260          
BLAST of mRNA_L-elsbetiae_contig4855.12763.1 vs. uniprot
Match: D8LFM6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFM6_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 9.290e-7
Identity = 44/94 (46.81%), Postives = 54/94 (57.45%), Query Frame = 0
Query:  110 AAGSRQPNYAESPTREPS-KRQRKASVPATGAGNDGRGAPETPQKPTGAVALREGGRWQECGYSGCTTIPSFAMAGSKKREYCSKHAKQGMVNV 202
            AAGSRQPN+ ESPTR  S +RQ K S P T  G  G  A  T    T A    +G R+  C   GCTT PS+  A  K  ++CS+H+K GM N+
Sbjct:   13 AAGSRQPNHTESPTRASSNRRQGKTSPPETTGG--GTAAIHTTSWRTKARCHDQGQRY--CQERGCTTQPSYGQAYRKNAQFCSQHSKPGMTNL 102          
BLAST of mRNA_L-elsbetiae_contig4855.12763.1 vs. uniprot
Match: A0A6H5JT00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT00_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 1.940e-6
Identity = 25/44 (56.82%), Postives = 34/44 (77.27%), Query Frame = 0
Query:  163 GGRWQECGYSGCTTIPSFAMAGSKKREYCSKHAKQGMVNVKSKR 206
            G R  +CG+  CT  P++ +AGSKKRE+CS+HA+ GMVNV +KR
Sbjct:   58 GSRMSQCGHENCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKR 101          
BLAST of mRNA_L-elsbetiae_contig4855.12763.1 vs. uniprot
Match: D7FI73_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI73_ECTSI)

HSP 1 Score: 57.8 bits (138), Expect = 1.120e-5
Identity = 23/39 (58.97%), Postives = 33/39 (84.62%), Query Frame = 0
Query:  168 ECGYSGCTTIPSFAMAGSKKREYCSKHAKQGMVNVKSKR 206
            +CG++ CT  P++ +AGSKKRE+CS+HA+ GMVNV +KR
Sbjct:    3 QCGHANCTKRPTYGVAGSKKREFCSQHARDGMVNVNNKR 41          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4855.12763.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FLW1_ECTSI1.670e-950.94EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5J913_9PHAE6.540e-846.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFM6_ECTSI9.290e-746.81EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JT00_9PHAE1.940e-656.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FI73_ECTSI1.120e-558.97EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4855contigL-elsbetiae_contig4855:4719..9151 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4855.12763.1mRNA_L-elsbetiae_contig4855.12763.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4855 4706..10208 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4855.12763.1 ID=prot_L-elsbetiae_contig4855.12763.1|Name=mRNA_L-elsbetiae_contig4855.12763.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=359bp
MVVTAVHKAKVEAERAAETAAQAVAVAAQKAEAAALAAGALEMKVYPPPV
LDDHKWLQSGVGGMSRGQGSGSSGGAIVGNCRATVAVKPLQGKRKLRHHG
KSPRRRSARAAGSRQPNYAESPTREPSKRQRKASVPATGAGNDGRGAPET
PQKPTGAVALREGGRWQECGYSGCTTIPSFAMAGSKKREYCSKHAKQGMV
NVKSKRCGHPGCTTRPTFGMVGSKKREFCSKHAKQVMVAVVNIRCGHPGC
TTRPNFGMVGSKKKESCARHAKQGMVDVMSKMCDHQRCTTRPTFGMVGSK
NKEFCSKHAKQGMVDVVNKRCGHPGCITIPSFGTVGGKKREFCRKHAKQG
MVHANTFK*
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