prot_L-elsbetiae_contig4847.12751.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4847.12751.1
Unique Nameprot_L-elsbetiae_contig4847.12751.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length319
Homology
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BLAST of mRNA_L-elsbetiae_contig4847.12751.1 vs. uniprot
Match: D7FS31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS31_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 1.340e-49
Identity = 133/238 (55.88%), Postives = 158/238 (66.39%), Query Frame = 0 
Query:   25 EVGVPTVEVEVKVSRFAKHPS-GHTVYECLVGLPQTRQVWLVFRRYRAFVALRQRLKTACQEYHQKHGGAPTARGDSNNHKPHAPTKRLPGRG------GGGXSAPXXXXXXXXXXANRAGRNGAAGAGAXXXXRGANSAALMASVETILSECRFPSRLALGRSFSLRKERRKALHAFLAALAQLRPLPRAVARFMGLLENDRMALDQCGNYVRVVLVDSLLPLPPAQGLGAAGPNKR 255
            E G+P V V  KVS F KHP+ GHT+YEC V LP TRQVW+V RRYR FVALRQ LKTACQ Y QK   AP++RG     KPH P  + P RG      GGG S  XXXXXXXXXX              X   R   SA L+ S+ETIL  C+FPSR+ LGRSFSL++ERRKALH+FL AL  LRPLP  VA F+GLLEN+R+A DQ G+YVRV+  +++LP+PP+    AA   +R
Sbjct:    7 EGGMPVVTV--KVSSFLKHPAAGHTLYECRVELPHTRQVWVVHRRYREFVALRQHLKTACQHYRQKKP-APSSRGG----KPH-PANKPPERGTASLGVGGGVSXXXXXXXXXXXXXXXX----------XACSRPPGSAELIESIETILFVCKFPSRIPLGRSFSLKQERRKALHSFLEALVYLRPLPNKVASFLGLLENNRLAQDQNGDYVRVMHTETVLPIPPSPAFHAAAHARR 226
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BLAST of mRNA_L-elsbetiae_contig4847.12751.1 vs. uniprot
Match: A0A6H5L1X4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1X4_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 2.130e-48
Identity = 127/226 (56.19%), Postives = 155/226 (68.58%), Query Frame = 0 
Query:   33 VEVKVSRFAKHPS-GHTVYECLVGLPQTRQVWLVFRRYRAFVALRQRLKTACQEYHQKHGGAPTARGDSNNHKPHAPTKRLPGRGG--GGXSAPXXXXXXXXXXANRAGRNGAAGAGAXXXXRGANSAALMASVETILSECRFPSRLALGRSFSLRKERRKALHAFLAALAQLRPLPRAVARFMGLLENDRMALDQCGNYVRVVLVDSLLPLPPAQGLGAAGPNKR 255
            V VKVS F KHP+ GHT+YEC V LP TRQVW+V RRYR FVALRQ LKT CQ Y QK   AP++RG  + H  + PT +     G  GG SA XXXXXXXXXX              XX  R   SA L+ S+ET+L  C+FPSR+ALGRSFSL++ERRKALH+FL AL  LRPLP  VA F+GL+EN+R+ALDQ G+YVRV+  +++LP+PP+    AA   +R
Sbjct:    4 VTVKVSSFLKHPAAGHTLYECRVELPHTRQVWVVHRRYREFVALRQHLKTVCQRYRQKKP-APSSRGGKS-HPANKPTGQGTAPSGVRGGVSAXXXXXXXXXXXXXXX----------XXGSRPPGSAELIESIETVLFVCKFPSRIALGRSFSLKQERRKALHSFLEALVFLRPLPNKVASFLGLVENNRLALDQNGDYVRVMHTETVLPMPPSPAFHAAARTRR 217
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4847.12751.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FS31_ECTSI1.340e-4955.88Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L1X4_9PHAE2.130e-4856.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001683Phox homologous domainPFAMPF00787PXcoord: 35..207
e-value: 8.5E-8
score: 32.2
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 28..222
score: 9.379
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 31..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4847contigL-elsbetiae_contig4847:2665..6792 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4847.12751.1mRNA_L-elsbetiae_contig4847.12751.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4847 2474..6792 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4847.12751.1 ID=prot_L-elsbetiae_contig4847.12751.1|Name=mRNA_L-elsbetiae_contig4847.12751.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=319bp
MENKRNLSFKRARSMGGSVANSPIEVGVPTVEVEVKVSRFAKHPSGHTVY
ECLVGLPQTRQVWLVFRRYRAFVALRQRLKTACQEYHQKHGGAPTARGDS
NNHKPHAPTKRLPGRGGGGGSAPGGLVAAATAAANRAGRNGAAGAGAGAA
SRGANSAALMASVETILSECRFPSRLALGRSFSLRKERRKALHAFLAALA
QLRPLPRAVARFMGLLENDRMALDQCGNYVRVVLVDSLLPLPPAQGLGAA
GPNKRLLPAHDRSDAGAASCSQRLSSSSVEPPAAAAAAAAAAGKEVVVAD
AAEEGGGKAREGEVSEPPA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001683Phox
IPR036871PX_dom_sf