prot_L-elsbetiae_contig4837.12736.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4837.12736.1
Unique Nameprot_L-elsbetiae_contig4837.12736.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length82
Homology
BLAST of mRNA_L-elsbetiae_contig4837.12736.1 vs. uniprot
Match: D7FW88_ECTSI (40S ribosomal protein S21 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW88_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 3.360e-52
Identity = 80/81 (98.77%), Postives = 80/81 (98.77%), Query Frame = 0
Query:    1 MQNEAGSNVDLYIPRKCSWTNRLLQATDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKDESEL 81
            MQNEAGSNVDLYIPRKCSWTNRLLQA DHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKDESEL
Sbjct:    1 MQNEAGSNVDLYIPRKCSWTNRLLQAKDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKDESEL 81          
BLAST of mRNA_L-elsbetiae_contig4837.12736.1 vs. uniprot
Match: B8BZU9_THAPS (40S ribosomal protein S21 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZU9_THAPS)

HSP 1 Score: 114 bits (285), Expect = 1.440e-31
Identity = 52/81 (64.20%), Postives = 60/81 (74.07%), Query Frame = 0
Query:    1 MQNEAGSNVDLYIPRKCSWTNRLLQATDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKDESEL 81
            MQNE G NVDLYIPRKCSWTNRL++A DH S QINV  +DPV+G FTGES  YA+AGY+R + E D A T LV   D+  L
Sbjct:    1 MQNENGENVDLYIPRKCSWTNRLIRAKDHGSVQINVANVDPVTGLFTGESTAYAMAGYIRDKSEGDMAFTALVEANDKKVL 81          
BLAST of mRNA_L-elsbetiae_contig4837.12736.1 vs. uniprot
Match: A0A1Z5KP36_FISSO (40S ribosomal protein S21 n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KP36_FISSO)

HSP 1 Score: 111 bits (278), Expect = 1.690e-30
Identity = 50/77 (64.94%), Postives = 62/77 (80.52%), Query Frame = 0
Query:    1 MQNEAGSNVDLYIPRKCSWTNRLLQATDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKD 77
            MQNE+G NVDLY+PRKCS+TNRL+QA DH++ QINV  +DPV+G  TG+S+VY LAGY+R + E D ALT LV  KD
Sbjct:    1 MQNESGQNVDLYVPRKCSYTNRLIQAKDHAAVQINVANVDPVTGIMTGDSNVYCLAGYIRFKSEGDMALTSLVRAKD 77          
BLAST of mRNA_L-elsbetiae_contig4837.12736.1 vs. uniprot
Match: A0A7S0FIC7_9STRA (40S ribosomal protein S21 n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FIC7_9STRA)

HSP 1 Score: 111 bits (278), Expect = 1.740e-30
Identity = 50/77 (64.94%), Postives = 59/77 (76.62%), Query Frame = 0
Query:    1 MQNEAGSNVDLYIPRKCSWTNRLLQATDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKD 77
            MQNE G NVDLY+PRKCSWTNRLL + DH S QINVG +DPV+G FTGES  +A++GY+R + EAD ALT L    D
Sbjct:    1 MQNENGDNVDLYVPRKCSWTNRLLTSGDHGSVQINVGNVDPVTGLFTGESTPFAISGYVRAKSEADMALTALAKAND 77          
BLAST of mRNA_L-elsbetiae_contig4837.12736.1 vs. uniprot
Match: A0A024TLB5_9STRA (40S ribosomal protein S21 n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024TLB5_9STRA)

HSP 1 Score: 110 bits (274), Expect = 5.960e-30
Identity = 49/78 (62.82%), Postives = 63/78 (80.77%), Query Frame = 0
Query:    1 MQNEAGSNVDLYIPRKCSWTNRLLQATDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKDE 78
            MQN+AG N+D+YIPRKCSWTNR+L A DH+S QI V K+D  +G +TG++DVYAL+GY+R +GE D ALT LV K +E
Sbjct:    1 MQNDAGQNIDIYIPRKCSWTNRILSAKDHASVQIAVAKVD-ANGVYTGQNDVYALSGYIRAKGEGDHALTDLVRKAEE 77          
BLAST of mRNA_L-elsbetiae_contig4837.12736.1 vs. uniprot
Match: G4ZUD9_PHYSP (40S ribosomal protein S21 n=7 Tax=Peronosporaceae TaxID=4777 RepID=G4ZUD9_PHYSP)

HSP 1 Score: 108 bits (271), Expect = 1.710e-29
Identity = 49/77 (63.64%), Postives = 62/77 (80.52%), Query Frame = 0
Query:    1 MQNEAGSNVDLYIPRKCSWTNRLLQATDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKD 77
            MQNEAG ++D+YIPRKCSWTNR+L A DH+S QINVG+++  +G FTGESD YALAGY+R  GE D+A+T L  + D
Sbjct:    1 MQNEAGQSIDIYIPRKCSWTNRILAAKDHASVQINVGRVN-ANGVFTGESDTYALAGYIRHHGEGDQAITELARQTD 76          
BLAST of mRNA_L-elsbetiae_contig4837.12736.1 vs. uniprot
Match: A0A448Z9N0_9STRA (40S ribosomal protein S21 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z9N0_9STRA)

HSP 1 Score: 108 bits (269), Expect = 4.080e-29
Identity = 48/77 (62.34%), Postives = 58/77 (75.32%), Query Frame = 0
Query:    1 MQNEAGSNVDLYIPRKCSWTNRLLQATDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKD 77
            MQNEAG NVDLY+PRKC+WTNRL++A DHSS Q+NV  +DPV+G  TG++  Y L GY+R   E D ALT LV K D
Sbjct:    1 MQNEAGENVDLYVPRKCNWTNRLVEAKDHSSVQVNVANVDPVTGLATGDATPYCLVGYIRKISEGDMALTALVEKND 77          
BLAST of mRNA_L-elsbetiae_contig4837.12736.1 vs. uniprot
Match: K3WSU9_GLOUD (40S ribosomal protein S21 n=2 Tax=Pythiaceae TaxID=4782 RepID=K3WSU9_GLOUD)

HSP 1 Score: 107 bits (266), Expect = 9.880e-29
Identity = 49/77 (63.64%), Postives = 62/77 (80.52%), Query Frame = 0
Query:    1 MQNEAGSNVDLYIPRKCSWTNRLLQATDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKD 77
            MQNEAG ++D+YIPRKCSWTNR+L A DH+S QINV +++  +G FTGESD +ALAGY+R +GEAD ALT L  + D
Sbjct:    1 MQNEAGESIDIYIPRKCSWTNRILAAKDHASVQINVARVN-ANGVFTGESDTFALAGYIRSKGEADLALTELARQAD 76          
BLAST of mRNA_L-elsbetiae_contig4837.12736.1 vs. uniprot
Match: A0A835Z072_9STRA (40S ribosomal protein S21 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z072_9STRA)

HSP 1 Score: 107 bits (266), Expect = 1.140e-28
Identity = 48/77 (62.34%), Postives = 61/77 (79.22%), Query Frame = 0
Query:    1 MQNEAGSNVDLYIPRKCSWTNRLLQATDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKD 77
            MQNE+G +VDLY+PRKCSWTNRLL A DH+S QINV K+DP +G  TG  +V+ALAG+LR  G++D AL  L ++KD
Sbjct:    1 MQNESGKDVDLYVPRKCSWTNRLLVAKDHASVQINVAKIDPQTGVATGAHEVFALAGFLRRLGQSDNALAALSSQKD 77          
BLAST of mRNA_L-elsbetiae_contig4837.12736.1 vs. uniprot
Match: A0A8J2SUB2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUB2_9STRA)

HSP 1 Score: 110 bits (274), Expect = 1.270e-28
Identity = 51/79 (64.56%), Postives = 63/79 (79.75%), Query Frame = 0
Query:    1 MQNEAGSNVDLYIPRKCSWTNRLLQATDHSSTQINVGKLDPVSGTFTGESDVYALAGYLRGRGEADEALTCLVNKKDES 79
            MQN+ G  VDLYIPRKCSWTNRL+ A+D +S QINVG +DP +G  TG S+ YAL+GY+R +GE+D ALT LV K+DES
Sbjct:  109 MQNDQGQPVDLYIPRKCSWTNRLIGASDQASVQINVGTIDPNTGLHTGGSETYALSGYVRNKGESDMALTELVRKQDES 187          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4837.12736.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW88_ECTSI3.360e-5298.7740S ribosomal protein S21 n=2 Tax=Ectocarpus TaxID... [more]
B8BZU9_THAPS1.440e-3164.2040S ribosomal protein S21 n=1 Tax=Thalassiosira ps... [more]
A0A1Z5KP36_FISSO1.690e-3064.9440S ribosomal protein S21 n=1 Tax=Fistulifera sola... [more]
A0A7S0FIC7_9STRA1.740e-3064.9440S ribosomal protein S21 n=1 Tax=Minutocellus pol... [more]
A0A024TLB5_9STRA5.960e-3062.8240S ribosomal protein S21 n=3 Tax=Aphanomyces TaxI... [more]
G4ZUD9_PHYSP1.710e-2963.6440S ribosomal protein S21 n=7 Tax=Peronosporaceae ... [more]
A0A448Z9N0_9STRA4.080e-2962.3440S ribosomal protein S21 n=1 Tax=Pseudo-nitzschia... [more]
K3WSU9_GLOUD9.880e-2963.6440S ribosomal protein S21 n=2 Tax=Pythiaceae TaxID... [more]
A0A835Z072_9STRA1.140e-2862.3440S ribosomal protein S21 n=1 Tax=Tribonema minus ... [more]
A0A8J2SUB2_9STRA1.270e-2864.56Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038579Ribosomal protein S21e superfamilyGENE3D3.30.1230.20coord: 1..80
e-value: 6.4E-31
score: 108.1
IPR001931Ribosomal protein S21ePFAMPF01249Ribosomal_S21ecoord: 1..77
e-value: 1.5E-32
score: 111.5
IPR001931Ribosomal protein S21ePIRSFPIRSF002148RPS21ecoord: 1..80
e-value: 1.3E-29
score: 100.1
IPR001931Ribosomal protein S21ePANTHERPTHR1044240S RIBOSOMAL PROTEIN S21coord: 1..76
NoneNo IPR availablePRODOMPD006584coord: 24..76
e-value: 9.0E-9
score: 137.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4837contigL-elsbetiae_contig4837:10771..13669 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4837.12736.1mRNA_L-elsbetiae_contig4837.12736.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4837 10771..13669 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4837.12736.1 ID=prot_L-elsbetiae_contig4837.12736.1|Name=mRNA_L-elsbetiae_contig4837.12736.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=82bp
MQNEAGSNVDLYIPRKCSWTNRLLQATDHSSTQINVGKLDPVSGTFTGES
DVYALAGYLRGRGEADEALTCLVNKKDESEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038579Ribosomal_S21e_sf
IPR001931Ribosomal_S21e