prot_L-elsbetiae_contig4827.12720.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4827.12720.1
Unique Nameprot_L-elsbetiae_contig4827.12720.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length452
Homology
BLAST of mRNA_L-elsbetiae_contig4827.12720.1 vs. uniprot
Match: A0A6H5JKL7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKL7_9PHAE)

HSP 1 Score: 313 bits (802), Expect = 4.880e-92
Identity = 236/498 (47.39%), Postives = 283/498 (56.83%), Query Frame = 0
Query:    1 QADDPRHHLPPVIVLHGLLGRIREGEEFPPAVGAVLRWCWTVTGGRRLAHVVLTAPQSMAVDGSLVRAKGFLNDGRLAPGMMRVVALNAPDSKVAERRFRSRFTTAAQQQAPQEAXXXXXXXRAVALCMELVHQDGCAVAEEANEILRRTELSEDKPGKLSASRLALDDTLDDFALEAWRRVAAAVATTASLAPPAHPDAAGAAIPAGAVPGASRPSGPPSTAAPAAAGVPVAVGDGSDSSLTVSARHTVEQEEVGEAAGAKQAL---DDVDGGPDATAGEGRGEGGGT---------GGVVRPTAAAGDXXXXXXXXXXLDAPPSLAPAPSAGREDGEECEDATEAGGATAT----ATPPELGQKQDDD---DGKEPAAPGFRVDEHSSLEAVEPLPTEPDSEAD---------QRPALAEERGRHGAFGPSAAGAVEYAAVP------------------PATPSGRLVRLLGELAGGGKVTLDHAVAALGGDGKA 452
            QA+DPR+HLPPVIV+ GLLG IREGE+ P AV AVLRWCWT+TGGRRLAHVVL APQS+AVDGSLVR KGFLNDGRLAPGMMRV+ALNAPDS V ERRFRSRF  A QQ++  +        RAV LCMELVH++GCAVAEEANEIL RT+ S+D P KLSA+RLAL+++L+ FALEAWRRV AAV +TA++AP     AA      GAV  A+  S   +  AP    VP ++  G  +  T + R+T E      A   + +     + DG P      G GE GG          G  V   A  GD           + P   +PA + G  DG+       +G A ++    ATP EL QKQ +    +GKEP A     DE + LEA E  P+    E             P +AEE                Y+A                    PATP GRLV LLGELA GGKV++ HAVAAL GDGKA
Sbjct:  153 QAEDPRNHLPPVIVMDGLLGHIREGEDVPAAVEAVLRWCWTITGGRRLAHVVLIAPQSLAVDGSLVRVKGFLNDGRLAPGMMRVIALNAPDSSVIERRFRSRFVVAPQQRS--QGGGGEEGERAVTLCMELVHREGCAVAEEANEILTRTDFSDDSPSKLSAARLALEESLEGFALEAWRRVGAAVESTAAIAPRGFAGAAAVVGTPGAVSSAALAS---NQRAP----VPPSMSTGGRTGATYAKRNTQEGRAESGATWTRTSPGSGSEGDGDP-----AGGGEEGGVQSANHGFDDGAAVAAGAGPGDDKAES------EVPGLSSPAAAVGPNDGK-------SGHADSSVEVEATPQELQQKQQESLQREGKEPPAADDTADEPAILEATELSPSSGGGEGTVYSEKAESLSAPVVAEESSS------------SYSAXXXXXXXXXXXXXXXXNPGDPATPVGRLVELLGELADGGKVSVHHAVAALDGDGKA 611          
BLAST of mRNA_L-elsbetiae_contig4827.12720.1 vs. uniprot
Match: D7G086_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G086_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 2.770e-85
Identity = 228/504 (45.24%), Postives = 274/504 (54.37%), Query Frame = 0
Query:    1 QADDPRHHLPPVIVLHGLLGRIREGEEFPPAVGAVLRWCWTVTGGRRLAHVVLTAPQSMAVDGSLVRAKGFLNDGRLAPGMMRVVALNAPDSKVAERRFRSRFTTAAQQQAPQEAXXXXXXXRAVALCMELVHQDGCAVAEEANEILRRTELSEDKPGKLSASRLALDDTLDDFALEAWRRVAAAVATTASLAPPAHPDAAGAAIPAGAVPGASRPSG-----PPSTAAPAAAGVPVA---VGDGSDSSLTVSARHTVEQEEV--------GEAAGAKQALDDVDGGPDATAGEGRGEGGGTGGVVRPTAAAGDXXXXXXXXXXLDAPPSLAPAPSAGREDGEECEDATEAGGATATATPPELGQKQDD----DDGKEPAAPGFRVDEHSSLEAVE-------------PLPTEPDSEADQRPALAEERGRHGAFGPSAAGAVEYAAVPPATPS-------------------GRLVRLLGELAGGGKVTLDHAVAALGGDGKA 452
            QADDPR+HLPPVIV+ GLLGRIREGE+ P AV AVLRWCWT+TGGRRLAHVVL APQS+AVDGSLVR KGFLNDGRLAPGMMRV+ALNAPDS V ERRFRSRF  A QQ  P +        RAV LCMELVH++GC+VA+EANEIL RT+ S+D P KLSA+RLAL+++LD FALEAWRRV AAV +TA++AP             GAV  A+  S      PPST+A  ++G   A     +G   S     R +              GE  G + A  DVD G    AG G G+                           + P   +PA +   +DG+     +    A A AT  EL Q++      D+GKEP A     DE +SLEA E                   ++E+   P +AEE        PS++                                 GRLV LLGELA GGKV++ HAVAAL GDGKA
Sbjct:  139 QADDPRNHLPPVIVMDGLLGRIREGEDVPAAVEAVLRWCWTITGGRRLAHVVLIAPQSLAVDGSLVRVKGFLNDGRLAPGMMRVIALNAPDSSVIERRFRSRFAAAPQQ--PTQGGAGEEGERAVTLCMELVHREGCSVADEANEILTRTDFSDDSPDKLSAARLALEESLDGFALEAWRRVGAAVESTAAIAPRGFAGTDAVVGTPGAVSSAALASNQRAPVPPSTSAGGSSGATSAKRNTQEGRAESGVTRTRTSXXXXXXXXXXPAGGGEEGGVQTANHDVDDGAAVAAGAGPGD----------------------DKAESEVPGLSSPAAAVVPKDGKRGHADSS---AEAEATREELQQQKQQESLQDEGKEPPAADITPDEPASLEASELSSFLSPRARGEEEAVYWEEAESLSAPVVAEE--------PSSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGRLVELLGELADGGKVSVHHAVAALDGDGKA 607          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4827.12720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JKL7_9PHAE4.880e-9247.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G086_ECTSI2.770e-8545.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4827contigL-elsbetiae_contig4827:8694..12256 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4827.12720.1mRNA_L-elsbetiae_contig4827.12720.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4827 8694..12256 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4827.12720.1 ID=prot_L-elsbetiae_contig4827.12720.1|Name=mRNA_L-elsbetiae_contig4827.12720.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=452bp
QADDPRHHLPPVIVLHGLLGRIREGEEFPPAVGAVLRWCWTVTGGRRLAH
VVLTAPQSMAVDGSLVRAKGFLNDGRLAPGMMRVVALNAPDSKVAERRFR
SRFTTAAQQQAPQEAEGEGEGERAVALCMELVHQDGCAVAEEANEILRRT
ELSEDKPGKLSASRLALDDTLDDFALEAWRRVAAAVATTASLAPPAHPDA
AGAAIPAGAVPGASRPSGPPSTAAPAAAGVPVAVGDGSDSSLTVSARHTV
EQEEVGEAAGAKQALDDVDGGPDATAGEGRGEGGGTGGVVRPTAAAGDGG
AGPGAGEGLDAPPSLAPAPSAGREDGEECEDATEAGGATATATPPELGQK
QDDDDGKEPAAPGFRVDEHSSLEAVEPLPTEPDSEADQRPALAEERGRHG
AFGPSAAGAVEYAAVPPATPSGRLVRLLGELAGGGKVTLDHAVAALGGDG
KA
back to top