prot_L-elsbetiae_contig4819.12705.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig4819.12705.1
Unique Nameprot_L-elsbetiae_contig4819.12705.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length606
Homology
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BLAST of mRNA_L-elsbetiae_contig4819.12705.1 vs. uniprot
Match: A0A6H5K777_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K777_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 8.530e-34
Identity = 67/77 (87.01%), Postives = 69/77 (89.61%), Query Frame = 0 
Query:    1 MGRTIAPTQRTPMIVHHLTLAHNEQKAMIRAHIFGVKELESWAMGAFAVILEKHAVGVPEDLLCLAKECKEFMWLSP 77
            MG T+APTQ TPMIVHHLTLAH+EQKAMIRAHIFGVKELE WAMG FAVILEKHAVGVPEDLL LAK CKEFMW  P
Sbjct:  191 MGETVAPTQFTPMIVHHLTLAHHEQKAMIRAHIFGVKELEQWAMGTFAVILEKHAVGVPEDLLRLAKGCKEFMWRLP 267
[Close]
BLAST of mRNA_L-elsbetiae_contig4819.12705.1 vs. uniprot
Match: A0A835YQ74_9STRA (Guanylate cyclase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ74_9STRA)

HSP 1 Score: 116 bits (290), Expect = 3.740e-23
Identity = 56/99 (56.57%), Postives = 71/99 (71.72%), Query Frame = 0 
Query:    5 IAPTQRTPMIVHHLTLAHNEQKAMIRAHIFGVKELESWAMGAFAVILEKHAVGVPEDLLCLAKECKEFMWLSPGLIGILKTLLAIRSGAGVSNATSKFR 103
            +A    TP++VHHLTLAH EQKAMIRAH+ GV+ELE+WA+  F  +L      +P     LA+  ++ MWLSP ++GILKTL AIRSG GVS+AT KFR
Sbjct: 1666 VASADITPLLVHHLTLAHREQKAMIRAHVIGVRELEAWAVKDFQKLLHACLPPLPAGARALARANRDLMWLSPAVVGILKTLAAIRSGQGVSSATRKFR 1764
[Close]
BLAST of mRNA_L-elsbetiae_contig4819.12705.1 vs. uniprot
Match: A0A835YQG7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQG7_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 2.070e-9
Identity = 37/83 (44.58%), Postives = 51/83 (61.45%), Query Frame = 0 
Query:   11 TPMIVHHLTLAHNEQKAMIRAHIFGVKELESWAMGAFAVILEKHA--VGVPEDLLCLAKECKEFMWLSPGLIGILKTLLAIRS 91
            T ++VHHL LAH EQKAMIRAH+ GV  L  W M     ++      + +PE +   A    + +WL+P L+G+L+TL AIRS
Sbjct:  591 TALLVHHLALAHKEQKAMIRAHMVGVAALRRWVMADLQRMVRAVMPWLRLPEAVAQSATAWHDLLWLAPHLLGVLRTLAAIRS 673
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig4819.12705.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5K777_9PHAE8.530e-3487.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YQ74_9STRA3.740e-2356.57Guanylate cyclase domain-containing protein n=1 Ta... [more]
A0A835YQG7_9STRA2.070e-944.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 132..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig4819contigL-elsbetiae_contig4819:7734..11249 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig4819.12705.1mRNA_L-elsbetiae_contig4819.12705.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig4819 6817..12744 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig4819.12705.1 ID=prot_L-elsbetiae_contig4819.12705.1|Name=mRNA_L-elsbetiae_contig4819.12705.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=606bp
MGRTIAPTQRTPMIVHHLTLAHNEQKAMIRAHIFGVKELESWAMGAFAVI
LEKHAVGVPEDLLCLAKECKEFMWLSPGLIGILKTLLAIRSGAGVSNATS
KFRDTMRLSRADRSETEVVPPSTAAEMLPSTTEGQEQEQEQEQEQEQKQE
KKVALENSMSISAAHNMGGERPDCVDGETVSTVPSHNLQHGPETTERADS
KRSQALESGSEASSDRDGHCRSLLSTREEPIGFVATPRDTRGQMAHHAAG
GAGAQRPFPRRRKRWRGRKKHARDVVGSGGSGGNEKLPFLPPSPLQPQGS
WPLMPSSLFSSSLMDAHSIYSGTSGRSKTSRPSVITGPFTNRQGSFRDRH
VRPRTAGDCTNPTRSAVLIYVTTRSNFDVPVRQPQTVSGSASSRSGGGDS
KGWLTKPSSSARPHHRGGVNNLGDSSGGWRVHRTTTSSTDTSHEVMSSGR
HPGSPPPPLQRRPSTVPLDAMRASLHGAEEGARAWLRDERAADSRDSARR
QLLLRTLRGGNSAAGKMSSNDCHQQKAWPARARTTATRRTGLTASGSCSP
ENCILSPERAAARLAGIRKAYGPESTGPFRGSSLYAATMKSSPSPSFSAH
RRGRG*
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