prot_L-elsbetiae_contig2116.6447.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2116.6447.1
Unique Nameprot_L-elsbetiae_contig2116.6447.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length61
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig2116.6447.1 vs. uniprot
Match: D7FUI7_ECTSI (Sept3, septin GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUI7_ECTSI)

HSP 1 Score: 50.1 bits (118), Expect = 1.630e-5
Identity = 32/65 (49.23%), Postives = 35/65 (53.85%), Query Frame = 0 
Query:    1 MPPNTSCDPASGAGAVPCELPDTKGRR-----GSLTSSRVPGDPSPQKLPDQLRVMVAGESGLGK 60
            MPPNT+       G  PC      G       G+  S RVPG P  +  PDQLRVMVAGESGLGK
Sbjct:    1 MPPNTT------VGTDPCMASPVVGDPQAKDGGNAPSVRVPGPPQQRPTPDQLRVMVAGESGLGK 59
[Close]
BLAST of mRNA_L-elsbetiae_contig2116.6447.1 vs. uniprot
Match: A0A6H5JBY2_9PHAE (Septin-type G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBY2_9PHAE)

HSP 1 Score: 48.1 bits (113), Expect = 7.820e-5
Identity = 30/61 (49.18%), Postives = 34/61 (55.74%), Query Frame = 0 
Query:    1 MPPNTSCDPASGAGAVPCELPDTKGRRGSLTSSRVPGDPSPQKLPDQLRVMVAGESGLGKA 61
            MPP+T+    SG G+                S RVPG P   + PDQLRVMVAGESGLGKA
Sbjct:    1 MPPSTAMASDSGMGSPVVGA-----------SVRVPGPPQQSQAPDQLRVMVAGESGLGKA 50
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2116.6447.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUI7_ECTSI1.630e-549.23Sept3, septin GTPase n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JBY2_9PHAE7.820e-549.18Septin-type G domain-containing protein n=1 Tax=Ec... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2116contigL-elsbetiae_contig2116:13632..13814 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2116.6447.1mRNA_L-elsbetiae_contig2116.6447.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2116 13632..13814 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2116.6447.1 ID=prot_L-elsbetiae_contig2116.6447.1|Name=mRNA_L-elsbetiae_contig2116.6447.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=61bp
MPPNTSCDPASGAGAVPCELPDTKGRRGSLTSSRVPGDPSPQKLPDQLRV
MVAGESGLGKA
back to top