prot_L-elsbetiae_contig2114.6439.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2114.6439.1
Unique Nameprot_L-elsbetiae_contig2114.6439.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length132
Homology
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BLAST of mRNA_L-elsbetiae_contig2114.6439.1 vs. uniprot
Match: D8LEG5_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEG5_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 1.950e-13
Identity = 58/142 (40.85%), Postives = 71/142 (50.00%), Query Frame = 0 
Query:    5 VGKDEHAWGWGHSSSSTGGVSAAEQLHRKRSIAHVFGQPPPPPSRPGSASSLQQP-SAAEAVTPSVGRAGSGYGFKGAAGA-----------GDVRLLGVPAGDVP--PEFGLPRAR---RSSYHQQVGWESGVVETKSEDP 129
            +GK E AWGWGH+++      A  QLH  RS A++FG  P          S QQP S+AEAVTPS+GR GSGY F    G            G   ++GVP  + P  P+ G PR R   R    QQV   +G    K EDP
Sbjct:  496 IGKHETAWGWGHNTAXXX-XXAERQLHASRSKANLFGGDP----------SKQQPGSSAEAVTPSMGREGSGYSFHVMGGXXXXXXXXXXRPGQHEVVGVPVRERPLTPDLGKPRPRHPGRQQQQQQVWAGAGSARHKVEDP 626
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BLAST of mRNA_L-elsbetiae_contig2114.6439.1 vs. uniprot
Match: A0A6H5JVJ2_9PHAE (Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVJ2_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 2.800e-11
Identity = 52/122 (42.62%), Postives = 66/122 (54.10%), Query Frame = 0 
Query:    5 VGKDEHAWGWGHSSSSTGGVSAAEQLHRKRSIAHVFGQPPPPPSRPGSASSLQQP-SAAEAVTPSVGRAGSGYGFK----GAAGAGDVR-----LLGVPAGDVP--PEFGLPRARRSSYHQQ 114
            +GK E AWGWGH++++     A +QLH  R  A +FG  P          S QQP S+AEAVTPS+GR GSGY F     G+ G G  R     ++GVP  + P  P+ G PR R     QQ
Sbjct:  551 IGKHETAWGWGHNTAAXX-XXAEQQLHASRPKAKLFGGDP----------SKQQPGSSAEAVTPSMGREGSGYRFHVVGGGSGGNGGGRPGLHEVVGVPVRERPLMPDLGKPRPRHPGRQQQ 661
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2114.6439.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LEG5_ECTSI1.950e-1340.85Ammonium transporter n=1 Tax=Ectocarpus siliculosu... [more]
A0A6H5JVJ2_9PHAE2.800e-1142.62Ammonium transporter n=1 Tax=Ectocarpus sp. CCAP 1... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2114contigL-elsbetiae_contig2114:3426..3821 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2114.6439.1mRNA_L-elsbetiae_contig2114.6439.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2114 3339..4042 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2114.6439.1 ID=prot_L-elsbetiae_contig2114.6439.1|Name=mRNA_L-elsbetiae_contig2114.6439.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=132bp
MSGGVGKDEHAWGWGHSSSSTGGVSAAEQLHRKRSIAHVFGQPPPPPSRP
GSASSLQQPSAAEAVTPSVGRAGSGYGFKGAAGAGDVRLLGVPAGDVPPE
FGLPRARRSSYHQQVGWESGVVETKSEDPRF*
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