prot_L-elsbetiae_contig2113.6437.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2113.6437.1
Unique Nameprot_L-elsbetiae_contig2113.6437.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length465
Homology
BLAST of mRNA_L-elsbetiae_contig2113.6437.1 vs. uniprot
Match: D7G3B6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3B6_ECTSI)

HSP 1 Score: 439 bits (1129), Expect = 5.430e-143
Identity = 254/423 (60.05%), Postives = 296/423 (69.98%), Query Frame = 0
Query:    5 DRVSSEGVLQRGKEKERKTSFHGSLIGLDTRCNMATEMVKVVVMQKCSPVEMVYKPVATVSIPLRSLPVVFPEDRSP---ENRT--------EGDTAAAXXXXXXXXXGSGPAVQGDSKRLSPRKCGKLSFVCRTGKVGGNAXXXXXXXXXXXXXXXXXGDRAPYGGEDLSEGGEAAQQQQQQHLPEPTARRYRLHTLAGPLTNRTMNNGFVVMSLTLAASGNDLLGEPEELDSEDVKVAPPPPPEPLTDGVLDVTLKVGYQRLRKALLWNDSKLQAALVDLLNHSEVEQSGWLDRDGEAAAQDNLTGCARQRSFVIPKSAMVAATKAESHEVVLADGPSLMAYEARTRTPAVSFGDKFTVVHQYVLTKLGPEQCRLQTSSSTVFSDKVMAFVANQIVSAVTKVSKENHHHLLGLIEDATSGK 416
            +RVSS G  +R K KE+KTSF+GS+I LD + NMAT+++K VV QK SPVEM YKPVATV IPLRS+PV+FPED +    EN+T        +               G+G A+ G S+R   R+ G LS       VGG                     R   GG     G     +QQ+   P  TAR Y L TLAGP+TNRTM NGFV+MSLTL ASGNDLLGEP+E D EDVK   PPPP+PLTD +LD  L  GYQRLRKALLWNDSKLQAALVDLLNHSEVEQS W+DRDGEAAAQ+NLTGC R+RSF++PKSAMVAAT+AE HE+VLADGPS +A+E RT+TP V++GDKFTVV+QYVLTK GPE CRLQ+SS T FSD++M FV NQIV+AV KVSKENH HL  LIEDA SGK
Sbjct:  445 NRVSS-GSFERNKGKEKKTSFNGSVITLDAKANMATDLIKFVVTQKVSPVEMAYKPVATVVIPLRSIPVIFPEDAAKAASENKTSPSLDKSNDQQEEEGAEGRAPPSEGTG-ALDGRSRRSCLRR-GSLS-------VGGG--------------------RVRSGGNXXXSGASGDGEQQR---PPATARPYHLQTLAGPMTNRTMGNGFVLMSLTLVASGNDLLGEPDERDGEDVKGPLPPPPDPLTDAILDTQLSSGYQRLRKALLWNDSKLQAALVDLLNHSEVEQSSWVDRDGEAAAQENLTGCTRRRSFMLPKSAMVAATRAECHEIVLADGPSFLAFETRTQTPGVAYGDKFTVVNQYVLTKEGPEACRLQSSSQTDFSDRIMGFVHNQIVAAVAKVSKENHGHLQSLIEDAISGK 834          
BLAST of mRNA_L-elsbetiae_contig2113.6437.1 vs. uniprot
Match: A0A6H5JEG8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEG8_9PHAE)

HSP 1 Score: 409 bits (1052), Expect = 1.220e-129
Identity = 270/517 (52.22%), Postives = 314/517 (60.74%), Query Frame = 0
Query:    5 DRVSSEGVLQRGKEKERKTSFHGSLIGLDTRCNMATEMVKVVVMQKC-SPVEMVYKPVATVSIPLRSLPVVFPE---DRSPENRTEGDTAAAXXXXXXXXXGSGPAVQGD-----SKRLSPRKCGKLSFVCRTGKVGGNAXXXXXXXXXXXXXXXXXGDRAPYGGEDLSEGGEAAQQQQQQHLPEPTARRYRLHTLAGPLTNRTMNNGFVVMSLTLAASGNDLLGEPEELDSEDVKVAPPPPPEPLTDGVLDVTLKVGYQRLRKALLWNDSKLQAALVDLLNHSEVEQSGWLDRDGEAAAQDNLTGCARQRSFVIPKSAMVAATKAESHEVVLADG--------------------------------PSLMAYEARTRTPAVSFGDKFTVVHQYVLTKLGPE----------------------------------QCRLQTSSSTVFSDKVMAFVANQIVSAVTKVSKENHHHLLGLIEDATSGKXXXXXXKGRRSLRQSSRGSVWYWSLGALVL 446
            +RVSS G  +R K KE+KTSF+GS+I LD + NMAT+++K VV QK  SPVE  YKPVATV IPLRS+PVVFPE   + + EN+        XXXXXXXXX   P  +G      + R S  + G LS      + GGN                    RA   G   S  GE         +P  TAR Y L TLAGP+TNR+M NGFV+MSL L ASGNDLLGEP+ELD EDVK   PPPP+PLTD +LD  L  GYQRLRKALLWNDSKLQAAL DLL+HSEVEQS W+DRDGEAAAQ+NLTGC R+RSF++PKS MVAATKAE H+VVLADG                                PSL+A+E RT+TP V +GDKFTVV+QYVLTK GP+                                  QCRLQ+SS T FSD++M FV NQIV+AV KVSKENH HL  LIEDA SGK       GR+S R+ SRGS W W +G LVL
Sbjct:  443 NRVSS-GSFERSKGKEKKTSFNGSVITLDAKANMATDLIKFVVTQKVVSPVETAYKPVATVVIPLRSIPVVFPENVAEAASENKAXXXXXXXXXXXXXXXXXXAPPSEGSGALDGTNRRSCLRRGSLSIGGGRVRSGGN--------------------RA---GSVASGDGEXXXXXXXXXMP-TTARSYHLQTLAGPMTNRSMGNGFVLMSLILVASGNDLLGEPDELDGEDVKGPLPPPPDPLTDAILDTQLSCGYQRLRKALLWNDSKLQAALADLLDHSEVEQSPWVDRDGEAAAQENLTGCRRRRSFMLPKSVMVAATKAECHDVVLADGGTFAKGLVWRTEGGGVGGGGGXXXXXXXXXGGPSLLAFETRTQTPGVPYGDKFTVVNQYVLTKEGPKATYISNIHQQQGPLPPYPRLHPLPDSSMRHRRDRQCRLQSSSQTDFSDRIMGFVHNQIVAAVAKVSKENHGHLQSLIEDAISGKGGGGA--GRKSSRKGSRGSRWLWCIGVLVL 932          
BLAST of mRNA_L-elsbetiae_contig2113.6437.1 vs. uniprot
Match: A0A7S2LIG8_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LIG8_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 7.970e-14
Identity = 57/173 (32.95%), Postives = 83/173 (47.98%), Query Frame = 0
Query:  237 PPEPLTDGVLDVTLKVGYQRLRKALLWNDSKLQ--AALVDLLNHSEVEQSGWLDRDGEAA-------AQDNLTGCARQRSFVIPKSAMVAATKAESHEVVLADGPSLMAYEARTRTPAVSFGDKFTVVHQYVLTKLGPEQCRLQTSSSTVFSDKVMAFVANQIVSAVTKVSKE 400
            PPE LT+  LD+ + VGY RLR+ALL  DS+    A + D   + ++    W +   E         A +   G +++ S+V+PKS  V A KA     ++A          RTRTP V +G+ F    Q V+ + G   CR+  SS   F D     VA QI S + + + E
Sbjct:  399 PPENLTNICLDMQVPVGYLRLRRALLHQDSRFMNDAVMRDGAKYEKISIGEWSNHADEIGLVQARDMAMEQAVGASQEISYVMPKSIFVKANKAFEKSTIIAYNDDCFVLRNRTRTPEVPYGEYFCTWTQLVVMRDGRNCCRMVCSSEAEFVDGRRPMVARQIESGIRRGTTE 571          
BLAST of mRNA_L-elsbetiae_contig2113.6437.1 vs. uniprot
Match: A0A6V0AEG2_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A6V0AEG2_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 7.420e-11
Identity = 55/166 (33.13%), Postives = 80/166 (48.19%), Query Frame = 0
Query:  228 EDVKVAPPPP-----PEPLTDGVLDVTLKVGYQRLRKALLWNDSKLQAALV--DLLNHSEVEQSGW--------LDRDGEAAAQDNLTGCARQRSFVIPKSAMVAATKAESHEVVLADGPSLMAYEARTRTPAVSFGDKFTVVHQYVLTKLGPEQCRLQTSSSTVF 378
            +D K APP P     PE L +  L++ L+VG+QRLR ALL ++S     +V    LN+  +E   W        L +  + A Q+   G  R+ S+++PKSA VAA  A     + A      + + R  TP V +G  F    +YV+   G   C+L  S   VF
Sbjct:  734 DDSKSAPPIPDGFEIPENLENVSLELNLQVGFQRLRWALLSSESSFIKDVVWKTELNYDNIEAGEWNKFNDGIGLSKLPDGAKQEECIGAERESSYLMPKSAFVAANTAHETAFIEAYNDYCFSLKLRALTPDVPYGSTFEAWTKYVVINTGSNSCKLTCSVEAVF 899          
BLAST of mRNA_L-elsbetiae_contig2113.6437.1 vs. uniprot
Match: A0A448YUS9_9STRA (VASt domain-containing protein n=2 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YUS9_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 4.300e-7
Identity = 42/143 (29.37%), Postives = 68/143 (47.55%), Query Frame = 0
Query:  246 LDVTLKVGYQRLRKALLWNDSKLQ--AALVDLLNHSEVEQSGW--------LDRDGEAAAQDNLTGCARQRSFVIPKSAMVAATKAESHEVVLADGPSLMAYEARTRTPAVSFGDKFTVVHQYVLTKLGPEQCRLQTSSSTVF 378
            L++ L+VG+QRLR ALL ++S     A +   LN+  +    W        L +  ++   ++  G  R+ S+++PKSA VAA  A     +        + + R  TP V +G  F    +YV+   G + C+L  S   VF
Sbjct:  727 LELNLQVGFQRLRWALLNSESSFMKDAVMKTELNYDNIVSGEWNKFNDEIGLSKLPDSVKHEDFIGAERKTSYLMPKSAFVAANTAHETAYIECYNDYCFSLKLRALTPDVPYGSTFEAWTKYVVINTGNKSCKLICSLEAVF 869          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2113.6437.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7G3B6_ECTSI5.430e-14360.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JEG8_9PHAE1.220e-12952.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2LIG8_9STRA7.970e-1432.95Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A6V0AEG2_9STRA7.420e-1133.13Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A448YUS9_9STRA4.300e-729.37VASt domain-containing protein n=2 Tax=Pseudo-nitz... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031968VASt domainPFAMPF16016VAStcoord: 246..393
e-value: 2.8E-9
score: 37.6
IPR031968VASt domainPROSITEPS51778VASTcoord: 236..417
score: 16.138
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..435
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 456..464
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 436..455
NoneNo IPR availableTMHMMTMhelixcoord: 436..455

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2113contigL-elsbetiae_contig2113:11306..21679 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2113.6437.1mRNA_L-elsbetiae_contig2113.6437.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2113 10508..21695 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2113.6437.1 ID=prot_L-elsbetiae_contig2113.6437.1|Name=mRNA_L-elsbetiae_contig2113.6437.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=465bp
MVGRDRVSSEGVLQRGKEKERKTSFHGSLIGLDTRCNMATEMVKVVVMQK
CSPVEMVYKPVATVSIPLRSLPVVFPEDRSPENRTEGDTAAAAAAAEAEA
NGSGPAVQGDSKRLSPRKCGKLSFVCRTGKVGGNANGNGNGSGGGGGGSG
SGGDRAPYGGEDLSEGGEAAQQQQQQHLPEPTARRYRLHTLAGPLTNRTM
NNGFVVMSLTLAASGNDLLGEPEELDSEDVKVAPPPPPEPLTDGVLDVTL
KVGYQRLRKALLWNDSKLQAALVDLLNHSEVEQSGWLDRDGEAAAQDNLT
GCARQRSFVIPKSAMVAATKAESHEVVLADGPSLMAYEARTRTPAVSFGD
KFTVVHQYVLTKLGPEQCRLQTSSSTVFSDKVMAFVANQIVSAVTKVSKE
NHHHLLGLIEDATSGKGGGGGGKGRRSLRQSSRGSVWYWSLGALVLAVAA
LFLLASRAPRGIVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031968VASt