prot_L-elsbetiae_contig2113.6436.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2113.6436.1
Unique Nameprot_L-elsbetiae_contig2113.6436.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length440
Homology
BLAST of mRNA_L-elsbetiae_contig2113.6436.1 vs. uniprot
Match: A0A6H5JJU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU4_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 2.780e-51
Identity = 170/279 (60.93%), Postives = 183/279 (65.59%), Query Frame = 0
Query:    2 VGQSVVRLVKAAQRYGPVVIVTESHERWVRGTAALLLPGGSAAACLEDVEIVSSKERFEGDFPNQPACWQIAAFSYVTNRHLLSPAAVARVRRANATASXXXXXXXXXXXXXXXXEGGXXXXXXXXXXXXXXXXXXALGRNRDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------------------------------------AAALTLREHHPTIASKTVSLMEAPTPLELKNQLDLLSGKLELMFGHAS 237
            VGQSVVRLV+AAQR+GPVVIVT+SHE WVRGTA LLLPGG+AAACLE+VE+VSS++RF  DFP+QPACWQIAAFSYVTNRHLLS  A  R RRANA A XXXXXXXXXXXXXXXX  G                       R+GS           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                           AAALTLREHHP + +KTVSLME PTPLELKNQLDLL+ K  LMFGHAS
Sbjct:   54 VGQSVVRLVRAAQRHGPVVIVTDSHEDWVRGTAELLLPGGAAAACLENVEVVSSRDRFAKDFPDQPACWQIAAFSYVTNRHLLSRGATDRFRRANAAAXXXXXXXXXXXXXXXXXVEGGRSRGTAGREAAEGRDGGETVEEREGSADVGTACCATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGHVRVSTRRGGTLIAVATAPKNSEDKAAALTLREHHPNVVAKTVSLMEGPTPLELKNQLDLLADKFRLMFGHAS 332          
BLAST of mRNA_L-elsbetiae_contig2113.6436.1 vs. uniprot
Match: D7FUZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUZ6_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 9.650e-47
Identity = 106/236 (44.92%), Postives = 118/236 (50.00%), Query Frame = 0
Query:    2 VGQSVVRLVKAAQRYGPVVIVTESHERWVRGTAALLLPGGSAAACLEDVEIVSSKERFEGDFPNQPACWQIAAFSYVTNRHLLSPAAVARVRRANATASXXXXXXXXXXXXXXXXEGGXXXXXXXXXXXXXXXXXXALGRNRDGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAALTLREHHPTIASKTVSLMEAPTPLELKNQLDLLSGKLELMFGHAS 237
            VGQSVVRLV+AAQR+GPVVIVT+SHE WVRGTA LLLPGG+AAACLE+VE+VSS++RF  DFP+QPACWQIAAFSYVTNRHLLS  A  R                                                                                                        REHHP + +KTVSLME PTPLELKNQLDLL+ K  LMFGHAS
Sbjct:   54 VGQSVVRLVRAAQRHGPVVIVTDSHEGWVRGTAELLLPGGAAAACLENVEVVSSRDRFAKDFPDQPACWQIAAFSYVTNRHLLSRGATDR-------------------------------------------------------------------------------------------------------FREHHPNVVAKTVSLMEGPTPLELKNQLDLLADKFRLMFGHAS 186          
BLAST of mRNA_L-elsbetiae_contig2113.6436.1 vs. uniprot
Match: A0A7J7IN39_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IN39_9RHOD)

HSP 1 Score: 58.5 bits (140), Expect = 1.400e-5
Identity = 28/77 (36.36%), Postives = 44/77 (57.14%), Query Frame = 0
Query:    6 VVRLVKAAQRYGPVVIVTESHERWVRGTAALLLPGGSAAACLEDVEIVSSKERFEGDFPNQPACWQIAAFSYVTNRH 82
            V+ ++K AQRYG V +VT +   WV+ +AA  +P         D+ I+S++  +E DFPN P+ W+  AF     +H
Sbjct:  341 VIGILKDAQRYGRVCVVTNAETGWVQLSAARFMPRVLRHLDASDIRIISARSVYEMDFPNSPSDWKTQAFRAELEKH 417          
BLAST of mRNA_L-elsbetiae_contig2113.6436.1 vs. uniprot
Match: A0A813FSU8_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FSU8_POLGL)

HSP 1 Score: 57.0 bits (136), Expect = 1.620e-5
Identity = 28/70 (40.00%), Postives = 43/70 (61.43%), Query Frame = 0
Query:    9 LVKAAQRYGPVVIVTESHERWVRGTAALLLPGGSAAACLEDVEIVSSKERFEGDFPNQPACWQIAAFSYV 78
            L+  A+  G V+I++ +   WV  +    LP  S A C+E VEIVS++++FE  FP+ PA W++ AF  V
Sbjct:   92 LLSLAKTLGTVMIISNATSSWVHQSCRKYLP--SLAKCIESVEIVSARDKFEKSFPDNPAQWKMEAFCEV 159          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2113.6436.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JJU4_9PHAE2.780e-5160.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUZ6_ECTSI9.650e-4744.92Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7J7IN39_9RHOD1.400e-536.36Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A813FSU8_POLGL1.620e-540.00Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR38899FAMILY NOT NAMEDcoord: 3..238

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2113contigL-elsbetiae_contig2113:2892..4211 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2113.6436.1mRNA_L-elsbetiae_contig2113.6436.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2113 2883..4402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2113.6436.1 ID=prot_L-elsbetiae_contig2113.6436.1|Name=mRNA_L-elsbetiae_contig2113.6436.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=440bp
MVGQSVVRLVKAAQRYGPVVIVTESHERWVRGTAALLLPGGSAAACLEDV
EIVSSKERFEGDFPNQPACWQIAAFSYVTNRHLLSPAAVARVRRANATAS
AAAAAVAASGPGGGSAEGGSSGGRGEASAAGNSSGGQALGRNRDGSGGGS
SSNGTSASTSGGGGDGGALAGGAGILMAVATSSRAAEDKAAALTLREHHP
TIASKTVSLMEAPTPLELKNQLDLLSGKLELMFGHASPPQPPLPPPTTLP
PPPPPSKTPAPSVSPSASSCSTSVATPEPRRYEEEEEGGGSDGSPMWDLS
GSSSSCPSSPAAPATPRRHPAAAAAAAAAAAAAGGKKPAQRREARFPGYN
GGEDEEEAGGDHDNDGDDDDDDEDYLTATCSASTMSSGSSTASTRAAWAS
LPPALHREASSPSSSSSTPFPRLWPPSPPSLLSPLRGLG*
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