prot_L-elsbetiae_contig21122.6434.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig21122.6434.1
Unique Nameprot_L-elsbetiae_contig21122.6434.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length194
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig21122.6434.1 vs. uniprot
Match: A0A6H5KRZ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ3_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 4.630e-18
Identity = 56/86 (65.12%), Postives = 69/86 (80.23%), Query Frame = 0 
Query:   16 EENSSSLLQSLEKEVVALRQSE-------SGLIAELQRRCDKMIELEVHLDEQRERADRLQRERAEEDEALSGELRDIIATVALDS 94
            E ++ SLLQSLEKEV+ LR+S        + L+AELQRRCDK+IELEV+LD++R RADRL RER EE+EALSGELRDI+ATV + S
Sbjct:   20 ENSNHSLLQSLEKEVLLLRKSRDEQEETTASLLAELQRRCDKVIELEVNLDQERARADRLARERMEEEEALSGELRDIMATVTVGS 105
[Close]
BLAST of mRNA_L-elsbetiae_contig21122.6434.1 vs. uniprot
Match: D7FLV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLV6_ECTSI)

HSP 1 Score: 88.6 bits (218), Expect = 2.180e-17
Identity = 53/80 (66.25%), Postives = 65/80 (81.25%), Query Frame = 0 
Query:   22 LLQSLEKEVVALRQSE-------SGLIAELQRRCDKMIELEVHLDEQRERADRLQRERAEEDEALSGELRDIIATVALDS 94
            LLQSLE EV++LR+S        + L+AELQRRCDK+IELEV+LD++R RADRL RER EE+EALSGELRDI+ATV + S
Sbjct:   23 LLQSLETEVLSLRKSRDEQEETTASLLAELQRRCDKVIELEVNLDQERARADRLARERTEEEEALSGELRDIMATVTVGS 102
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21122.6434.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRZ3_9PHAE4.630e-1865.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLV6_ECTSI2.180e-1766.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 51..78
NoneNo IPR availableCOILSCoilCoilcoord: 23..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig21122contigL-elsbetiae_contig21122:503..1790 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig21122.6434.1mRNA_L-elsbetiae_contig21122.6434.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig21122 501..1790 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig21122.6434.1 ID=prot_L-elsbetiae_contig21122.6434.1|Name=mRNA_L-elsbetiae_contig21122.6434.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=194bp
MMGSDEAMMGSDDVREENSSSLLQSLEKEVVALRQSESGLIAELQRRCDK
MIELEVHLDEQRERADRLQRERAEEDEALSGELRDIIATVALDSASSGSS
SSLNLAAAAAAAAVAAASSDSAAVDVAAEPTDGAAATTTAGEPTGRTGAS
GATGEPAERNGAAAGATEEPTEQEPTREGPVPAASGGGDGGAAG
back to top