prot_L-elsbetiae_contig2112.6430.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2112.6430.1
Unique Nameprot_L-elsbetiae_contig2112.6430.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length230
Homology
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BLAST of mRNA_L-elsbetiae_contig2112.6430.1 vs. uniprot
Match: D7FH86_ECTSI (BRCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH86_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 6.350e-9
Identity = 63/195 (32.31%), Postives = 86/195 (44.10%), Query Frame = 0 
Query:   38 GADKLTAAHCCEQLVALSESGXXXXXXXXXXXXXXXXXXXXXXXXXNDHLEAGSSXXXXXXGSGSRGSTCGVDLTLKRKAPSWPGLGLAPPERRGNAERGGEWSKRMRDDSSALERRGPAEPSTLGPPDPLSGVGIIVTGVRRAPREEIEAGITRLGGEIVEVFSEDGGVTNGWRACLLGEAGQ--AGAGGSAEP 230
            G D LTA HCCEQL+ALSESG                            L  G +       +G  GS+   D+ +  K  + P   L P  R  +       S    DD  A     P          PL+GVG+I+ G+   PR+E+EA I  LG E+V++  E GG    W++ LLGE+ +  A +G +AEP
Sbjct:  435 GEDNLTA-HCCEQLLALSESGSGAAACGSDGASASGHCE-------GGDLVTGKASVDRCAENGGNGSSDSDDVDVV-KNDAVPLNHLLPISRASSG------SANAGDDLGATHSSSPPREG------PLAGVGVILAGLGEQPRQEMEAKIRNLGAEVVDILGESGG----WKSWLLGESTRTVANSGSTAEP 604
[Close]
BLAST of mRNA_L-elsbetiae_contig2112.6430.1 vs. uniprot
Match: A0A6H5JG92_9PHAE (BRCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG92_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 1.540e-5
Identity = 58/187 (31.02%), Postives = 79/187 (42.25%), Query Frame = 0 
Query:   40 DKLTAAHCCEQLVALSESGXXXXXXXXXXXXXXXXXXXXXXXXXNDHLEAGS--------SXXXXXXGSGSRGSTCGVDLTLKRKAPSWPGLGLAPPERRGNAERGGEWSKRMRDDSSALERRGPAEPSTLGPPDPLSGVGIIVTGVRRAPREEIEAGITRLGGEIVEVFSEDGGVTNGWRACLLGE 218
            DKLTA HCCEQL+ALSESG                         ++H E G                G+GS  S   VD+      P    L    P  RG++      S    DD  A     P          PL+GVG+I+ G+ +  R+++EA I  LG E+V++     G ++GWR+ LL E
Sbjct:  614 DKLTA-HCCEQLLALSESGSGTAVGGSDVASA------------SNHCEGGDVVTGKGSVDRFAENGGTGSSDSA-NVDVVENDAVP----LNHLLPISRGSSG-----SANADDDLGATLSSSPPREG------PLTGVGVILAGLGQQSRQQMEAKIRNLGAEVVDIL----GKSDGWRSWLLRE 767
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2112.6430.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FH86_ECTSI6.350e-932.31BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JG92_9PHAE1.540e-531.02BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2112contigL-elsbetiae_contig2112:4698..5387 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2112.6430.1mRNA_L-elsbetiae_contig2112.6430.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2112 4698..5389 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2112.6430.1 ID=prot_L-elsbetiae_contig2112.6430.1|Name=mRNA_L-elsbetiae_contig2112.6430.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=230bp
AAERETAAARSWPARDAAAGGEGEIDDDPATAGVPWGGADKLTAAHCCEQ
LVALSESGGSCGGGGGGGSSVTGEPGGGSSGGDNDHLEAGSSSCSSSSGS
GSRGSTCGVDLTLKRKAPSWPGLGLAPPERRGNAERGGEWSKRMRDDSSA
LERRGPAEPSTLGPPDPLSGVGIIVTGVRRAPREEIEAGITRLGGEIVEV
FSEDGGVTNGWRACLLGEAGQAGAGGSAEP
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