prot_L-elsbetiae_contig211.6414.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig211.6414.1
Unique Nameprot_L-elsbetiae_contig211.6414.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length238
Homology
BLAST of mRNA_L-elsbetiae_contig211.6414.1 vs. uniprot
Match: B5LWG6_9PHYC (Putative oligoribonuclease n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWG6_9PHYC)

HSP 1 Score: 296 bits (759), Expect = 1.020e-98
Identity = 138/229 (60.26%), Postives = 178/229 (77.73%), Query Frame = 0
Query:    1 SSKQISRDYDRYNPWFWIDMETSGLDPNASEVLEINVVVTDVNLVPWDSLHVVINHPMNILMLKSSSWCKRKFCSTTYGGNGLFDACNFSTTTLEDATFMLWNFFEFYSSHEIGKEKPPELNRQFFDKTIGANGQNLSNFDVSLSAYS-SKTPHRLILLCGSTVHFDRGFLVTHFPSLKRFLNHKNIDVTTLLETAKRFRPDILDKKPKPSSTHRAIDDILDSINLYKY 228
            + K  +R YDR NPWFWID+ETS LD + S+VLEI +VVTD  L  WDSLHVVI+HP+NILMLKSS+WCK KFCS +YGGNGLFD C++S T++ DAT ++ NFFE+YS+HEIG+ +P   +R FFD+T GANG  LS +D+S    + + T     LL GSTV+FDR  +  HFP L+++L+HKN+DVT+LLETAKRF PD+++ KPKP+  HRA+DDILDS+ LYKY
Sbjct:    9 TKKVFNRGYDRNNPWFWIDIETSSLDFSTSDVLEIAIVVTDSGLNVWDSLHVVIHHPINILMLKSSNWCKEKFCSRSYGGNGLFDDCHYSNTSITDATHLMLNFFEYYSTHEIGRGRPAHKSRTFFDRTSGANGMKLSPYDISCQVQNFTGTRRSQGLLAGSTVYFDRRIIEKHFPVLRKYLSHKNVDVTSLLETAKRFHPDLIENKPKPTMVHRAMDDILDSLTLYKY 237          
BLAST of mRNA_L-elsbetiae_contig211.6414.1 vs. uniprot
Match: Q6XM84_9PHYC (FirrV-1-A3 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM84_9PHYC)

HSP 1 Score: 272 bits (695), Expect = 3.620e-89
Identity = 132/232 (56.90%), Postives = 172/232 (74.14%), Query Frame = 0
Query:    6 SRDYDRYNPWFWIDMETSGLDPNASEVLEINVVVTDVNLVPWDSLHVVINHPMNILMLKSSSWCKRKFCSTTYGGNGLFDACNFSTTTLEDATFMLWNFFEFYSSHEIG--KEKPPELNRQFFDKTIGANGQNLSNFDVS---LSAYSSKTP----HRLILLCGSTVHFDRGFLVTHFPSLKRFLNHKNIDVTTLLETAKRFRPDILDKKPKPSSTHRAIDDILDSINLYKY 228
            ++ Y+RYNPWFWIDMETS LD + SEVLE+ +VVTD +L  WDSLH+VI+HP+NILMLKSS+WCK++FCS  YGGNGLFD C++S T++ DAT  +  FFE+Y +H+IG    +PP   R FFD+T G NG  LS    +   +    + TP     +  LL GSTV+FDR  + THFP L+++L+HKNIDVTT+LETAKRFRPD++  KPKP   HRA+DDI+DS+ LY+Y
Sbjct:    3 NKTYERYNPWFWIDMETSSLDFSQSEVLEVALVVTDHHLNVWDSLHLVIHHPINILMLKSSNWCKQRFCSLKYGGNGLFDECHYSETSIADATHKMLQFFEYYCTHDIGTGSRRPPPSERSFFDRTRGTNGVLLSPLRCTHRDIPKQCTTTPGGSKKKQALLTGSTVYFDRRIIETHFPLLQKYLSHKNIDVTTMLETAKRFRPDLMQYKPKPLMKHRAMDDIMDSLALYRY 234          
BLAST of mRNA_L-elsbetiae_contig211.6414.1 vs. uniprot
Match: D8LPG5_ECTSI (EsV-1-139 n=2 Tax=root TaxID=1 RepID=D8LPG5_ECTSI)

HSP 1 Score: 221 bits (563), Expect = 1.010e-68
Identity = 108/234 (46.15%), Postives = 160/234 (68.38%), Query Frame = 0
Query:    3 KQISRDYDRYNPWFWIDMETSGLDPNASEVLEINVVVTDVNLVPWDSLHVVINHPMNILMLKSSSWCKRKFCSTTYGGNGLFDACNFSTTTLEDATFMLWNFFEFYSSHEIGKEKPPEL--NRQFFDKTIGANGQNLSNFDVSLSAYSS---KTPHRLILLCGSTVHFDRGFLVTHFPSLKRFLNHKNIDVTTLLETAKRFRPDILDKKPKPSSTHRAIDDILDSINLYKYFRE 231
            K    DY+   PWFWIDMET+GLD + + +LEI +VVTD +L   DS+ +V++HP +IL+ +SS+WC+RKFC    GGNGLF+AC+FS  +  +A + +WNFF+ YS    G+    ++  ++ FFD+T+GANG  L   D S   +     ++ ++  LL GSTV+FDR FL+ +FP LK F +++ +DV+T LE  +R+RPD+  K P+ + +HRA DDILDSI+L K+F+E
Sbjct:   31 KTSKHDYENEFPWFWIDMETTGLDTDTNLILEIVMVVTDRDLNEIDSMRLVLHHPHSILLARSSAWCRRKFCHRREGGNGLFEACHFSALSHHEAEYRMWNFFDHYSKDVGGRYDTTQITSSQPFFDRTLGANGTFLGASDASRCRHQQQPRRSNYKKCLLAGSTVYFDRIFLLKYFPCLKTFFHYRVVDVSTPLEMVRRWRPDVAAKLPRRNGSHRAYDDILDSISLMKFFKE 264          
BLAST of mRNA_L-elsbetiae_contig211.6414.1 vs. uniprot
Match: A0A835Z4U2_9STRA (Ribonuclease H-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4U2_9STRA)

HSP 1 Score: 132 bits (331), Expect = 3.150e-34
Identity = 74/230 (32.17%), Postives = 121/230 (52.61%), Query Frame = 0
Query:   15 WFWIDMETSGLDPNASE--VLEINVVVTDVNLVPWDSLHVVINHPMNILMLKSSSWCKRKFCSTTYGGNGLFDACNFSTTTLEDATFMLWNFFEFYSSHEIGKEKPPELNRQFFDKTIGANGQNLSNFDVSLSAYSSKT-------------PHRLILLCGSTVHFDRGFLVTHFPSLKRFLNHKNIDVTTLLETAKRFRPDILDKKPKPSSTHRAIDDILDSINLYKYF 229
            W ++D+E + LD  A    +LEI   + D ++   D+ HV++N P +I+   +S WCK++FCS   GGN LF  C+ S  T   A FML  F   ++     +    E  R+FF          L   D ++   +S+               H  ++L G +V+FDR  L+  +P L+  + HK I++++LLE A+++RPDIL   P     HRA+ D+L+S++L ++F
Sbjct:    9 WLFLDIECTQLDYQAHNFGILEIAAAIVDNSMEVIDTFHVIVNQPAHIIAA-ASKWCKKRFCSRLEGGNDLFAQCDASIITEAQAGFMLEQFIMKHAKERHMQPDEAEQKRRFFQAA------ELETIDAAIETETSEAFIEKDVEKTQGGISHFRVMLAGCSVYFDRAVLLHIYPRLRNLIGHKTIELSSLLEIARKWRPDILATLPPAQDAHRALIDVLESVSLLRWF 231          
BLAST of mRNA_L-elsbetiae_contig211.6414.1 vs. uniprot
Match: A0A836CDV0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDV0_9STRA)

HSP 1 Score: 119 bits (299), Expect = 3.570e-29
Identity = 78/247 (31.58%), Postives = 123/247 (49.80%), Query Frame = 0
Query:   15 WFWIDMETSGLDPNASE--VLEINVVVTDVNLVPWDSLHVVINHPMNILMLKSSSWCKRKFCSTTYGGNGLFDACNFSTTTLEDATFMLWNFFEFYSSHEIGK-----EKPPELNRQFFDKT-----IGANGQNLSNFDVSLS---------AYSSKTPHRL------ILLCGSTVHFDRGFLVTHFPSLKRFLNHKNIDVTTLLETAKRFRPDILDKKPKPSSTHRAIDDILDSINLYKYFREQVF 234
            W W D+E +GLDP +    VLEI   VT  +L   D+ HV+I+ P  +L   +SSWC   F     GGN LF  C  S  +  +A  +L  F   ++     +     E P  + ++   KT     +  +G  ++  D+            AY    P         ++  G + +FDRG ++  FP+L++++ HK IDVT++LE  +R+RPD+L   P P  THRA+ D+L+SI L ++    +F
Sbjct:   22 WIWCDIECTGLDPTSPGFGVLEIAAAVTGDDLTVQDTFHVIIHQPDRVLA-GASSWCAEHFGPRYAGGNDLFQQCRASVISEAEAGELLEAFIVKHAKPRKARAAAAAEVPEAVVKRNVFKTAEFGDVIEDGDAMAG-DIEAQDTRRHRAGPAYGRPRPRAQQHDVYRVMFAGCSCYFDRGVILNRFPNLRKYIAHKTIDVTSVLEITRRWRPDLLRSLPAPQGTHRALPDVLESICLLRWVMTNLF 266          
BLAST of mRNA_L-elsbetiae_contig211.6414.1 vs. uniprot
Match: A0A835ZEI1_9STRA (Ribonuclease H-like domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEI1_9STRA)

HSP 1 Score: 114 bits (286), Expect = 2.180e-27
Identity = 74/246 (30.08%), Postives = 125/246 (50.81%), Query Frame = 0
Query:    2 SKQISRDYDRYNP-WFWIDMETSGLDPNASE--VLEINVVVTDVNLVPWDSLHVVINHPMNILMLKSSSWCKRKFCSTTYGGNGLFDACNFSTTTLEDATFMLWNFFEFYSSHE---IGKEKPPELNRQF----FD--------KTIGANGQNLSNFDVSLSAYSSKTPHRLILLCGSTVHFDRGFLVTHFPSLKRFLNHKNIDVTTLLETAKRFRPDILDKKPKPSSTHRAIDDILDSINLYKYF 229
            S Q+    +RYN  W  +D+E + LD  + +  +LEI   V D  +   D+ HV+++    I+   SS WCK++F S   GGN LF  C  ST T E A  ML  F   ++       G E   +    F    F+        + +    + ++     +   S+   H  I+L G +V+FDR  L+  +P L+ ++ HK I++++LLE  +R+RPD+L   P     HRA+ D++++++L ++F
Sbjct:    4 SPQLFSSQNRYNALWMMLDIECTSLDYTSPDFGILEIAASVVDDAMEVIDTFHVIVHQNARIIG-NSSRWCKQRFRSRLEGGNDLFAQCELSTITEEMAGAMLEAFILKHAKKRQPAAGSEHDAQKRNLFRAAEFEPIDALVAHEVVDGPAEEVAPPKQQMKVESTGMEHYRIMLAGCSVYFDRAVLLHCYPRLRMYIGHKTIELSSLLEIVRRWRPDLLRSLPPTQECHRALVDVMEAVSLLRWF 248          
BLAST of mRNA_L-elsbetiae_contig211.6414.1 vs. uniprot
Match: A0A835YX31_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX31_9STRA)

HSP 1 Score: 107 bits (267), Expect = 2.190e-24
Identity = 72/246 (29.27%), Postives = 115/246 (46.75%), Query Frame = 0
Query:   15 WFWIDMETSGLDPNASE--VLEINVVVTDVNLVPWDSLHVVINHPMNILMLKSSSWCKRKFCSTTYGGNGLFDACNFSTTTLEDATFMLWNFFEFYSSHEIGK-----EKPPELNRQFFDKTI------------------GANGQNLSNFDVSLSAYSSKTPHRL-ILLCGSTVHFDRGFLVTHFPSLKRFLNHKNIDVTTLLETAKRFRPDILDKKPKPSSTHRAIDDILDSINLYKYFREQVF 234
            W W D+E +GLDP A    +LEI   +T  +L   D+ HVV++ P  +L   +S WC   F     GGN LF+    S  +   A  ML  F   ++     +     E P    ++   KT                   GA  Q         +   ++      ++  G + +FDRG ++  FP+L++++ HK IDVT++LE  +R+RPD+L   P P   HRA+ D+L+S+ L ++    +F
Sbjct:   33 WLWCDIECTGLDPAAPGFGILEIAAAITGDDLTVQDTFHVVVHQPPRVLA-GASRWCAEHFGPRYAGGNDLFEQSKASVISESAAGEMLEAFIVKHAKPRRARAAAAAEGPEAACKRSMFKTAEFGDVMEEVVMPEGPATEGAQRQQPXXXXXRTNRPKAQQHDVFRVMFAGCSCYFDRGAILARFPNLRKYVAHKTIDVTSVLEITRRWRPDLLRCLPAPQGVHRALPDVLESVCLLRWVMTNLF 277          
BLAST of mRNA_L-elsbetiae_contig211.6414.1 vs. uniprot
Match: A0A1F4BKQ9_9PROT (Oligoribonuclease n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BKQ9_9PROT)

HSP 1 Score: 95.9 bits (237), Expect = 6.060e-21
Identity = 69/219 (31.51%), Postives = 101/219 (46.12%), Query Frame = 0
Query:   13 NPWFWIDMETSGLDPNASEVLEINVVVTDVNLVPWDSLHVVINHPMNILMLKSSSWCKRKFCSTTYGGNGLFDACNFSTTTLEDATFMLWNFFEFYSSHEIGKEKPPELNRQFFDKTIGANGQNLSNFDVSLSAYSSKTPHRLILLCGSTVHFDRGFLVTHFPSLKRFLNHKNIDVTTLLETAKRFRPDILDKKPKPSSTHRAIDDILDSINLYKYFRE 231
            N   WIDME SGLDP+A +VLE+ +VVTD  L       V++ H  + ++     W +      T+G +GL      ST T  D    L  F        +    PP+++                                   +CG++VH DR F+  H P+L+ F  ++N+DV+TL E AKR++PDI+    K    H A+ DI +SI   KY+RE
Sbjct:    6 NNLIWIDMEMSGLDPDADKVLEVAIVVTDSRLNTVAEGPVLVVHQPDAVLDAMDEWNRG-----THGKSGLTGRVKASTLTEADVEQRLVAF--------LAGHVPPKVSP----------------------------------MCGNSVHQDRRFMARHLPALEAFFLYRNLDVSTLKELAKRWKPDIMAGLVKHGK-HEALADIYESIEELKYYRE 176          
BLAST of mRNA_L-elsbetiae_contig211.6414.1 vs. uniprot
Match: A0A2J8HFI5_VIBDI (Oligoribonuclease n=7 Tax=Vibrio TaxID=662 RepID=A0A2J8HFI5_VIBDI)

HSP 1 Score: 91.3 bits (225), Expect = 3.490e-19
Identity = 63/217 (29.03%), Postives = 99/217 (45.62%), Query Frame = 0
Query:   17 WIDMETSGLDPNASEVLEINVVVTDVNLVPWDSLHVVINHPMNILMLKSSSWCKRKFCSTTYGGNGLFDACNFSTTTLEDATFMLWNFFEFYSSHEIGKEKPPELNRQFFDKTIGANGQNLSNFDVSLSAYSSKTPHRLILLCGSTVHFDRGFLVTHFPSLKRFLNHKNIDVTTLLETAKRFRPDILDKKPKPSSTHRAIDDILDSINLYKYFREQV 233
            WID+E +GLDP A +++EI  +VTD  L       V+  H     + K   WC     + T+ G+GL +    S+ T E A      F E +    + + K P                                      +CG+++  DR FL  H P L+ + +++ IDV+TL E  +R++P++LD   K  S H A+DDI +SI   KY+R+ +
Sbjct:   10 WIDLEMTGLDPEAHKIIEIATIVTDSQLNILAEGPVLAIHQPESELDKMDDWC-----TNTHTGSGLVERIRQSSVTEEQAVAQTIEFLEKW----VPRGKSP--------------------------------------ICGNSIGQDRRFLYKHMPELEEYFHYRYIDVSTLKELTRRWKPEVLDGFSKKGS-HLALDDIRESIAELKYYRQTI 178          
BLAST of mRNA_L-elsbetiae_contig211.6414.1 vs. uniprot
Match: A0A3D2VBV5_9GAMM (Oligoribonuclease n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D2VBV5_9GAMM)

HSP 1 Score: 90.9 bits (224), Expect = 5.130e-19
Identity = 63/218 (28.90%), Postives = 95/218 (43.58%), Query Frame = 0
Query:   17 WIDMETSGLDPNASEVLEINVVVTDVNLVPWDSLHVVINHPMNILMLKSSSWCKRKFCSTTYGGNGLFDACNFSTTTLEDATFMLWNFFEFYSSHEIGKEKPPELNRQFFDKTIGANGQNLSNFDVSLSAYSSKTPHRLILLCGSTVHFDRGFLVTHFPSLKRFLNHKNIDVTTLLETAKRFRPDILDKKPKPSSTHRAIDDILDSINLYKYFREQVF 234
            WID+E +GL+P A  ++EI  VVTD +L       V+  H    ++    +W +     TT+ G GL      S  T  +A     +F   +    +                                            LCG+++  DR FL  H P L+ FL+++N+DV+++ E A R+RP + D   K    HRA+DDIL+SI   KY+RE  F
Sbjct:    8 WIDLEMTGLNPQADRIIEIATVVTDADLNSLGRGPVLAVHQSEAVLSGMDNWNQ-----TTHSGTGLISRVRASAVTESEAETATLDFLRDHVKPGVSP------------------------------------------LCGNSICQDRRFLAQHMPRLESFLHYRNLDVSSIKELAIRWRPGLADGFVKQGG-HRALDDILESIEELKYYREHFF 177          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig211.6414.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B5LWG6_9PHYC1.020e-9860.26Putative oligoribonuclease n=1 Tax=Feldmannia spec... [more]
Q6XM84_9PHYC3.620e-8956.90FirrV-1-A3 n=1 Tax=Feldmannia irregularis virus a ... [more]
D8LPG5_ECTSI1.010e-6846.15EsV-1-139 n=2 Tax=root TaxID=1 RepID=D8LPG5_ECTSI[more]
A0A835Z4U2_9STRA3.150e-3432.17Ribonuclease H-like domain-containing protein n=1 ... [more]
A0A836CDV0_9STRA3.570e-2931.58Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835ZEI1_9STRA2.180e-2730.08Ribonuclease H-like domain-containing protein n=2 ... [more]
A0A835YX31_9STRA2.190e-2429.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1F4BKQ9_9PROT6.060e-2131.51Oligoribonuclease n=1 Tax=Betaproteobacteria bacte... [more]
A0A2J8HFI5_VIBDI3.490e-1929.03Oligoribonuclease n=7 Tax=Vibrio TaxID=662 RepID=A... [more]
A0A3D2VBV5_9GAMM5.130e-1928.90Oligoribonuclease n=1 Tax=Gammaproteobacteria bact... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11046OLIGORIBONUCLEASE, MITOCHONDRIALcoord: 16..234
NoneNo IPR availablePANTHERPTHR11046:SF13OLIGORIBONUCLEASEcoord: 16..234
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 13..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig211contigL-elsbetiae_contig211:33558..34271 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig211.6414.1mRNA_L-elsbetiae_contig211.6414.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig211 33558..34271 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig211.6414.1 ID=prot_L-elsbetiae_contig211.6414.1|Name=mRNA_L-elsbetiae_contig211.6414.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=238bp
SSKQISRDYDRYNPWFWIDMETSGLDPNASEVLEINVVVTDVNLVPWDSL
HVVINHPMNILMLKSSSWCKRKFCSTTYGGNGLFDACNFSTTTLEDATFM
LWNFFEFYSSHEIGKEKPPELNRQFFDKTIGANGQNLSNFDVSLSAYSSK
TPHRLILLCGSTVHFDRGFLVTHFPSLKRFLNHKNIDVTTLLETAKRFRP
DILDKKPKPSSTHRAIDDILDSINLYKYFREQVFDKI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_sf