prot_L-elsbetiae_contig2104.6380.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2104.6380.1
Unique Nameprot_L-elsbetiae_contig2104.6380.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length241
Homology
BLAST of mRNA_L-elsbetiae_contig2104.6380.1 vs. uniprot
Match: D8LE07_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE07_ECTSI)

HSP 1 Score: 417 bits (1072), Expect = 1.010e-143
Identity = 221/243 (90.95%), Postives = 230/243 (94.65%), Query Frame = 0
Query:    1 KFSKWADRSSGVNPFLPFPPRLPKSLCLRVPVFLLRLCLALVRVPVALSLLMTASVGGALSRYLPVVMAVWAAERAMNGFSSDQVWGTRFLLAIPLLVFAQFGVTVFRVFLVRIPLRLALSVMGIKLEEKHADLRRLGLRSPGAEPPSGRPGGGIFRGDIIVRNSCSFLEVLYLQSRVTPQFTAIAAGGESAPAKLMRIRFVSAVLGSFRGPPAAGALK--ETLRDIITSPRGRTRSIVVAPE 241
            KFSKWADRSSGVNPF+PFPPR PKSLCL VPV+LLRLCLALVR+PVALSLLMTASVGGALSRYLPV+MA WAAERAMNGFSSDQVW TRFLLAIPLLVFAQFG +VFRVFLVRIPLRLALSVMGIKLEEKHADLRRLGLRSP AEPPSGRPGGGI+RGDIIVRNSC FLEVLYLQSRVTPQFTAIAAGG SAP  L RIRFVSAVLGSFRGPPAAGALK  +TLRDI+T+PRGRTRSIVVAPE
Sbjct:    3 KFSKWADRSSGVNPFVPFPPRSPKSLCLLVPVYLLRLCLALVRMPVALSLLMTASVGGALSRYLPVLMAFWAAERAMNGFSSDQVWSTRFLLAIPLLVFAQFGASVFRVFLVRIPLRLALSVMGIKLEEKHADLRRLGLRSPAAEPPSGRPGGGIYRGDIIVRNSCCFLEVLYLQSRVTPQFTAIAAGGGSAPVNLTRIRFVSAVLGSFRGPPAAGALKKEQTLRDIVTAPRGRTRSIVVAPE 245          
BLAST of mRNA_L-elsbetiae_contig2104.6380.1 vs. uniprot
Match: A0A4D9CRK5_9STRA (PlsC domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRK5_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 1.510e-14
Identity = 87/259 (33.59%), Postives = 131/259 (50.58%), Query Frame = 0
Query:    1 KFSKWADRSSGVNPFLPFPPRLPKSLCLRVPVFLLRLCLALVRVPVALSLLMTASVGGALSRYLP-----VVMAVWAAERAMNGFSSDQVW----GTRFLLAIPLLVFAQFGVTVFRVF---LVRIPLRLALSVMGIKLEEKHADLRRLGLRSPGAEPPSGRPGGGIFRGDIIVRNSCSFLEVLYLQSRVTPQFTAIAAGGESAPAKLMRIRFVSAVLGSFRG---PPAA---GALKETLRDIITSPRGRTRSIVVAPE 241
            KF+KWAD+ +G+NPFLP   R   SL  +V   LL + L  VR P+   +L+T +   ALS         +  A++     ++G  S  +      T F L + L       V + R+F    +R P+ L LS++G+   E+HA+LR+LGLR PG  P   R G  I  GDI++ N  S LEVL+  SR  P F+A+A       A + + R ++ +   +R    PP A   GA  + L  +    + + R++VV PE
Sbjct:    3 KFTKWADKGTGINPFLP-QRRAASSLPSKVASGLLAVVLIAVRPPL---ILLTLAWFFALSLLTKPWFDILTGALFTTYAYLDGGPSKPMTLSPQHTGFFLLV-LGSLTALSVPIRRLFSFLTLRPPMYLLLSILGVSYREQHANLRKLGLRPPGHRPHDSRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALAV------APVAQGRLLTPLQAWWRAGLVPPKAFETGA-GQALSSLAAEAKRQGRAVVVFPE 249          
BLAST of mRNA_L-elsbetiae_contig2104.6380.1 vs. uniprot
Match: K8YZX9_NANGC (Light harvesting complex protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YZX9_NANGC)

HSP 1 Score: 82.4 bits (202), Expect = 2.330e-14
Identity = 76/196 (38.78%), Postives = 101/196 (51.53%), Query Frame = 0
Query:    1 KFSKWADRSSGVNPFLPFPPRLPKSLCLRVPVFLLRLCLALVRVPV---------ALSLLMTASVGGALSRYLPVVMAVWAAERAMNGFSSDQVWGTRFLLAIPLLVFAQFGVT-VFRVFLVRIPLRLALSVMGIKLEEKHADLRRLGLRSPGAEPPSGRPGGGIFRGDIIVRNSCSFLEVLYLQSRVTPQFTAIA 186
            KF+KWAD+ +G+NPFLP   R   SL  +V   LL + L  VR+P+         ALSLL T      L+  L    A      +     S Q  G  FLL +  L      +  VF    +R P+ L LS++G+   E+HA+LR+LGLR PG  P   R G  I  GDI++ N  S LEVL+  SR  P F+A+A
Sbjct:   37 KFTKWADKGTGINPFLP-QRRAASSLPSKVASGLLAIVLIAVRLPLILLTLTWFLALSLL-TKPWFDILTGALFTTYAYLDEGPSKPMTLSPQHTGF-FLLVLGSLTALSVPIRRVFSFLTLRPPVYLLLSILGVSYREQHANLRKLGLRPPGHRPHDSRIGRTIQAGDILLSNHTSPLEVLFFISRFLPAFSALA 229          
BLAST of mRNA_L-elsbetiae_contig2104.6380.1 vs. uniprot
Match: A0A835YJM5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJM5_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 3.210e-12
Identity = 72/189 (38.10%), Postives = 99/189 (52.38%), Query Frame = 0
Query:    1 KFSKWADRSSGVNPFLPFPPRLPKSLCLRVPVFLLRLCLALVRVPVALSLLMTASVGGALSRYLPVVMAVWAAERAMNGFSSDQVWGTRFLLAIPLLVFAQFGVT-VFRVFLVRIPLRLALSVMGIKLEEKHADLRRLGLRS-PGAEPPSGRPGGGIFR-GDIIVRNSCSFLEVLYLQSRVTPQFTAIA 186
            KF+KW D +SGVNPF+P  PRLP++  L+    LL   LALVR P+    L+   V   L+R + +++   AA      +    V     L+ + L   A   +T + R  +     R AL+V+GI ++E+ A+LRRLGL+     E    R  GG+   GDIIV N  SF EVLYL  R  P F   A
Sbjct:    3 KFTKWQD-ASGVNPFIPPAPRLPRNPLLKGGRLLLGCLLALVRAPLFGLCLLCLFVAERLARPVTLMVLGLAAVATRKHYFEGAV-----LVGLGLTGAAVVPLTRLVRRVMFTFWSRSALAVLGIWVKEQPANLRRLGLQQGTNVEAARKRTWGGLAAPGDIIVSNYTSFAEVLYLMGRADPHFATAA 185          
BLAST of mRNA_L-elsbetiae_contig2104.6380.1 vs. uniprot
Match: M4BVL6_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BVL6_HYAAE)

HSP 1 Score: 60.8 bits (146), Expect = 3.520e-7
Identity = 71/246 (28.86%), Postives = 110/246 (44.72%), Query Frame = 0
Query:    1 KFSKWADRSSGVNPFLPFPPRLPKSLCLRVPVFLLRLC----LALVRVPVALSLLMTASVGGALSRYLPVVMAVWAAERAMNGFSSDQVWGTRFLLAIPLLVFAQFGVTVFRVFLVRIPLRLALSVMGIKLEEKHADLRRLGLRSPGAEPPSGRPGGGIFRGDIIVRNSCSFLEVLYLQSRVTPQFTAIAAGGESAPAKLMRI-RFVSAVLGSFRGPPAAGALKETLRDIITSPRGRTRSIVVAPE 241
            K+S+WAD ++G+NPF+P   R         PV +L++     LALVR                    LP+V+ V  A   +N             + + +L    F   + +  +  +   L L + G+   E+ A++RRLGL +   +  S +    + RGD++V NS SFLEVLYL  R +P F   A   +S    L+ +   + A+  S   P  A  +K T R I    R  +  IV+ PE
Sbjct:    3 KYSRWADLTTGINPFVPQRRRFASGW----PVTILQVTCGSLLALVR--------------------LPLVLVVTVALVVVN-------------IVVSILTVIPFVGRLLKRLIEYLLCSLLLLLFGVFTSEEAANMRRLGLVT--GKTKSSKSSSRVGRGDVVVCNSTSFLEVLYLAKRFSPVFV-YAIDEKSDTGNLVHVCGLLEALYRSLTMPVTAERVKPT-RKIADVVRRASGPIVLLPE 207          
BLAST of mRNA_L-elsbetiae_contig2104.6380.1 vs. uniprot
Match: A0A3M6VHU1_9STRA (Uncharacterized protein n=3 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHU1_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 8.580e-7
Identity = 70/244 (28.69%), Postives = 111/244 (45.49%), Query Frame = 0
Query:    1 KFSKWADRSSGVNPFLPFPPRLPKSLCLRVPVFLLRLCLALVRVPVALSLLMTASVGGALSRYLPVVMAVWAAERAMNGFSSDQVWGTRFLLAIPLLVFAQFGVTVFRVFLVRIPLRLALSVMGIKLEEKHADLRRLGLRSPGAEPPSGRPGGGIFRGDIIVRNSCSFLEVLYLQSRVTPQFTAIAAGGESAPAKLMRI-RFVSAVLGSFRGPPAAGALKET--LRDIITSPRGRTRSIVVAPE 241
            K+S+WAD S+G+NPF+P   R      + +        LAL+R P+     ++  V G L+  + ++  +    R +   S    W    L ++ LL+F                        G+   E+ A+ RRLGL +  A+  S +    + RGD++V N  SFLE+LYL  R +P F  IA G +S    L+ +   + A+  S   P +A  +K T  L D++    G    +VV PE
Sbjct:    3 KYSRWADLSTGINPFVPQRRRFTSGWPITILQVTSGSLLALIRFPLVF---VSTVVLGLLNIVVSMLAVIPFLGRLLKRSSE---W---LLCSLLLLLF------------------------GVYTMEESANTRRLGLSTLKAK--SSKESSRVGRGDVVVCNYTSFLEILYLSKRFSPVFV-IATGVKSNDESLVHVCGLMEALYWSLAMPVSAERVKPTRKLADVVRRASG---PVVVLPE 207          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2104.6380.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LE07_ECTSI1.010e-14390.95Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9CRK5_9STRA1.510e-1433.59PlsC domain-containing protein n=2 Tax=Monodopsida... [more]
K8YZX9_NANGC2.330e-1438.78Light harvesting complex protein (Fragment) n=1 Ta... [more]
A0A835YJM5_9STRA3.210e-1238.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
M4BVL6_HYAAE3.520e-728.86Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A3M6VHU1_9STRA8.580e-728.69Uncharacterized protein n=3 Tax=Peronospora effusa... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 61..89
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 112..241
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 33..60
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..32
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 90..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2104contigL-elsbetiae_contig2104:12646..19354 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2104.6380.1mRNA_L-elsbetiae_contig2104.6380.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2104 12646..19355 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2104.6380.1 ID=prot_L-elsbetiae_contig2104.6380.1|Name=mRNA_L-elsbetiae_contig2104.6380.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=241bp
KFSKWADRSSGVNPFLPFPPRLPKSLCLRVPVFLLRLCLALVRVPVALSL
LMTASVGGALSRYLPVVMAVWAAERAMNGFSSDQVWGTRFLLAIPLLVFA
QFGVTVFRVFLVRIPLRLALSVMGIKLEEKHADLRRLGLRSPGAEPPSGR
PGGGIFRGDIIVRNSCSFLEVLYLQSRVTPQFTAIAAGGESAPAKLMRIR
FVSAVLGSFRGPPAAGALKETLRDIITSPRGRTRSIVVAPE
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