prot_L-elsbetiae_contig2104.6379.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2104.6379.1
Unique Nameprot_L-elsbetiae_contig2104.6379.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length358
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig2104.6379.1 vs. uniprot
Match: D8LE06_ECTSI (Sel1 domain protein repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE06_ECTSI)

HSP 1 Score: 69.3 bits (168), Expect = 2.180e-10
Identity = 33/38 (86.84%), Postives = 35/38 (92.11%), Query Frame = 0 
Query:  315 GVAPLSDEAAAARDELRASLLEAKRVNDNLVAGYDYGL 352
            G +PLSDEAAAARDELRASLLEA+RVN  LVAGYDYGL
Sbjct:  135 GASPLSDEAAAARDELRASLLEAQRVNKELVAGYDYGL 172
[Close]
BLAST of mRNA_L-elsbetiae_contig2104.6379.1 vs. uniprot
Match: A0A6U4KSW9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4KSW9_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 8.920e-8
Identity = 31/70 (44.29%), Postives = 47/70 (67.14%), Query Frame = 0 
Query:   65 GLDYDLGKGLGLTRGHEVPISVVQSVIHAADQGNRDSLYFLGLLKLYGISVSPDAGKALEYMRKAAELRH 134
            GLD  LG+ +GL  G ++  + V +VI  A +G+ +SLYFLGL +LYG+ ++ D  +AL+  R+AAE  H
Sbjct:   33 GLDVTLGEEVGLEPGDDIDPATVNAVIQGAGRGSPESLYFLGLFRLYGMGMAKDELRALQSFRRAAEAGH 102
[Close]
BLAST of mRNA_L-elsbetiae_contig2104.6379.1 vs. uniprot
Match: A0A482SI98_9ARCH (Sel1 repeat family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SI98_9ARCH)

HSP 1 Score: 63.2 bits (152), Expect = 2.470e-7
Identity = 28/72 (38.89%), Postives = 46/72 (63.89%), Query Frame = 0 
Query:   66 LDYDLGKGLGLTRGHEVPISVVQSVIHAADQGNRDSLYFLGLLKLYGISVSPDAGKALEYMRKAAELRHLEA 137
            L+  LGK  G+T+   +   ++Q ++   + GN+D++YF GLLKLYGIS+  D+  A +   +A++L H EA
Sbjct:   29 LEIQLGKEKGITQDASISADILQRILAGVEAGNKDNIYFYGLLKLYGISMVKDSKSAAQQFLRASKLGHAEA 100
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2104.6379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LE06_ECTSI2.180e-1086.84Sel1 domain protein repeat-containing protein n=1 ... [more]
A0A6U4KSW9_9STRA8.920e-844.29Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A482SI98_9ARCH2.470e-738.89Sel1 repeat family protein n=1 Tax=archaeon TaxID=... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 245..280
e-value: 0.0011
score: 28.2
coord: 171..207
e-value: 1.9E-5
score: 34.1
coord: 208..244
e-value: 6.9E-4
score: 28.9
coord: 281..316
e-value: 2.2E-7
score: 40.5
coord: 135..170
e-value: 6.1E-6
score: 35.7
coord: 99..134
e-value: 0.0037
score: 26.5
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 100..132
e-value: 7.0E-6
score: 26.5
coord: 172..207
e-value: 3.9E-9
score: 36.9
coord: 245..280
e-value: 0.16
score: 12.7
coord: 216..243
e-value: 7.0E-5
score: 23.4
coord: 136..170
e-value: 7.5E-6
score: 26.5
coord: 282..315
e-value: 3.2E-7
score: 30.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 86..318
e-value: 8.5E-60
score: 204.5
NoneNo IPR availablePANTHERPTHR11102SEL-1-LIKE PROTEINcoord: 191..314
coord: 93..215
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 28..357
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 23..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.594
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 215..316
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 92..215

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2104contigL-elsbetiae_contig2104:4985..10214 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2104.6379.1mRNA_L-elsbetiae_contig2104.6379.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2104 4985..10214 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2104.6379.1 ID=prot_L-elsbetiae_contig2104.6379.1|Name=mRNA_L-elsbetiae_contig2104.6379.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=358bp
MRTIARRHLCALVSTAATLGILGVVDCDVSGSYHGAAARSALHDAGEMDP
KQDRARRPASSLVDGLDYDLGKGLGLTRGHEVPISVVQSVIHAADQGNRD
SLYFLGLLKLYGISVSPDAGKALEYMRKAAELRHLEAMAALGVMLLHGRG
GSRDFGAAAAWFRLAATEGHVEAMWLLGRMYCEGKGVGKVDFEEANKWFH
RAAAEGSPRGQHHLAGVAHEYGSGVSKDFREAARWYFLAAAQGLAESNYH
LGLMKAHGRGFAQDLSGAAIHFQKSAQQHHAPSMMYLGKMCLYGQGFPVD
YDMALLWFEKAAEEGVAPLSDEAAAARDELRASLLEAKRVNDNLVAGYDY
GLDDGRG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf