prot_L-elsbetiae_contig2104.6378.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2104.6378.1
Unique Nameprot_L-elsbetiae_contig2104.6378.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length141
Homology
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BLAST of mRNA_L-elsbetiae_contig2104.6378.1 vs. uniprot
Match: D8LE05_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE05_ECTSI)

HSP 1 Score: 172 bits (435), Expect = 8.080e-53
Identity = 94/126 (74.60%), Postives = 107/126 (84.92%), Query Frame = 0 
Query:   14 MEMARFMIYLTVPVVVITVCSDPKNMNTLLRGFNFVEYPPESKKLPSGKEIVKMMEEREAKRRAAAARAGVDAHLAAAGAVKRAPTSQKNGTILDATATVAPPAPNSLREGDQTPAAA---KKGWF 136
            MEMARF +Y++VPVVVIT+CSDPKNMNTLLRGF FVEYPPESKKLPSGKEIV+MMEEREAKRR AA R+G+DAHLAAAGAV R PTS++  T LDATATV PP P++ RE DQ+ A     K+GWF
Sbjct:    1 MEMARFFMYVSVPVVVITICSDPKNMNTLLRGFKFVEYPPESKKLPSGKEIVEMMEEREAKRRTAATRSGMDAHLAAAGAVTRTPTSRRTDTTLDATATV-PPTPDASREVDQSAAGTASKKRGWF 125
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BLAST of mRNA_L-elsbetiae_contig2104.6378.1 vs. uniprot
Match: A0A7S2WWS6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WWS6_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 1.500e-8
Identity = 29/71 (40.85%), Postives = 44/71 (61.97%), Query Frame = 0 
Query:    2 RWMHPNPRKRYG--MEMARFMIYLTVPVVVITVCSDPKNMNTLLRGFNFVEYPPESKKLPSGKEIVKMMEE 70
            RW   +  KR G  +EM +F IYLT+PVV   +  DPK M  ++  F ++ YPPE  + P G ++VK+++E
Sbjct:   41 RWWGSSHVKRGGGRVEMFKFAIYLTIPVVASLLYGDPKTMEAIINRFRYIIYPPEGPRPPEGDQLVKILKE 111
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2104.6378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LE05_ECTSI8.080e-5374.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2WWS6_9STRA1.500e-840.85Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018625Protein Pet100PFAMPF09803Pet100coord: 14..79
e-value: 1.0E-7
score: 32.3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..34
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 19..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..140
NoneNo IPR availableTMHMMTMhelixcoord: 15..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2104contigL-elsbetiae_contig2104:1974..3956 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2104.6378.1mRNA_L-elsbetiae_contig2104.6378.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2104 61..4647 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2104.6378.1 ID=prot_L-elsbetiae_contig2104.6378.1|Name=mRNA_L-elsbetiae_contig2104.6378.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=141bp
MRWMHPNPRKRYGMEMARFMIYLTVPVVVITVCSDPKNMNTLLRGFNFVE
YPPESKKLPSGKEIVKMMEEREAKRRAAAARAGVDAHLAAAGAVKRAPTS
QKNGTILDATATVAPPAPNSLREGDQTPAAAKKGWFGSSR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018625Pet100