prot_L-elsbetiae_contig21030.6376.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig21030.6376.1
Unique Nameprot_L-elsbetiae_contig21030.6376.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length422
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21030.6376.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 18..320
e-value: 5.6E-6
score: 26.9
IPR008615FNIPPFAMPF05725FNIPcoord: 348..390
e-value: 2.4E-4
score: 21.2
coord: 185..226
e-value: 1.6E-7
score: 31.3
coord: 45..86
e-value: 7.8E-9
score: 35.6
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 284..417
coord: 140..329
coord: 11..177
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 12..322

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig21030contigL-elsbetiae_contig21030:392..1854 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig21030.6376.1mRNA_L-elsbetiae_contig21030.6376.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig21030 392..1854 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig21030.6376.1 ID=prot_L-elsbetiae_contig21030.6376.1|Name=mRNA_L-elsbetiae_contig21030.6376.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=422bp
FDCNIDNVVWPRELCSLSFGKSFDRLMFRALWPVSLQHLTFGGSFNQPIT
GIAWPPLLKTLVFGRNFNQPIAGIVWPPSLEQLTFGWGFGQPLTGVSWPP
LLRKIVFGNVNVRQPIDKISWPASLQHLLFTGRFYYSTCGTWPDSAQQLT
FGFFFRLRFNQVSFENVAWPSSLRNLTRLHFPEGFNRPIDGNFLPDTLKA
VTFGKAFNQPIAGVVWPSSVERLSLGGTGRLQEPISSIAWPSSLTHLICG
EHFDQKDFPAWPGSLQEMPFEHYFRLYFNTSLASVSWPASLRQLTIYGMD
HTLGQRTDVRMLPPSLDTLDFPDRFDEPLDRVPWTQGGLEEVKFGSSFNQ
PINGVGWPPKVTTITFGRAYDQPIDGVLWPPTVRTIIFGHDFDQRIDRVS
WTNVEKLVFGDSFNQPIDRVPW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP