prot_L-elsbetiae_contig21026.6374.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig21026.6374.1
Unique Nameprot_L-elsbetiae_contig21026.6374.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length58
Homology
BLAST of mRNA_L-elsbetiae_contig21026.6374.1 vs. uniprot
Match: A0A6H5JCR2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCR2_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 7.290e-29
Identity = 53/57 (92.98%), Postives = 55/57 (96.49%), Query Frame = 0
Query:    1 SFQDAFSPFGKVYSIKIMWPRTDEERARKRNCGFVSFWRREDAVNAKRTMMDTDFEG 57
            + Q+AFSPFGKVYSIKIMWPRTDEERARKRNCGFVSFWRREDAVNAKR MMDTDFEG
Sbjct:  157 ALQEAFSPFGKVYSIKIMWPRTDEERARKRNCGFVSFWRREDAVNAKRAMMDTDFEG 213          
BLAST of mRNA_L-elsbetiae_contig21026.6374.1 vs. uniprot
Match: D7FSA5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSA5_ECTSI)

HSP 1 Score: 114 bits (284), Expect = 4.710e-28
Identity = 51/57 (89.47%), Postives = 55/57 (96.49%), Query Frame = 0
Query:    1 SFQDAFSPFGKVYSIKIMWPRTDEERARKRNCGFVSFWRREDAVNAKRTMMDTDFEG 57
            + Q+AFSPFGKVYSIKIMWPRTDEERARKRNCGF+SFWR+EDAVNAKR MMDTDFEG
Sbjct:  253 ALQEAFSPFGKVYSIKIMWPRTDEERARKRNCGFLSFWRKEDAVNAKRAMMDTDFEG 309          
BLAST of mRNA_L-elsbetiae_contig21026.6374.1 vs. uniprot
Match: A0A836CAC0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAC0_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 6.520e-18
Identity = 38/54 (70.37%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    4 DAFSPFGKVYSIKIMWPRTDEERARKRNCGFVSFWRREDAVNAKRTMMDTDFEG 57
            + FS FG++YSIKIMWPRTDEERAR+RNCGFVSFWRR DA  A+  M   D EG
Sbjct:  191 EIFSAFGEIYSIKIMWPRTDEERARRRNCGFVSFWRRGDAEAAREAMQGKDVEG 244          
BLAST of mRNA_L-elsbetiae_contig21026.6374.1 vs. uniprot
Match: A0A7S2DH44_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DH44_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 8.820e-18
Identity = 36/57 (63.16%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    1 SFQDAFSPFGKVYSIKIMWPRTDEERARKRNCGFVSFWRREDAVNAKRTMMDTDFEG 57
            +  + FS FG++YS+KIMWPRT+EERAR+RNCGFVSF +R DA +AK TM D + EG
Sbjct:  104 TLHELFSRFGQIYSVKIMWPRTEEERARRRNCGFVSFMQRPDADDAKTTMHDGEIEG 160          
BLAST of mRNA_L-elsbetiae_contig21026.6374.1 vs. uniprot
Match: A0A7S3UX26_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UX26_HETAK)

HSP 1 Score: 81.6 bits (200), Expect = 1.070e-16
Identity = 36/54 (66.67%), Postives = 43/54 (79.63%), Query Frame = 0
Query:    4 DAFSPFGKVYSIKIMWPRTDEERARKRNCGFVSFWRREDAVNAKRTMMDTDFEG 57
            D FS +G++YS+KIMWPRT+EER RKRNCGFVS+ RR DA +AK  M D D EG
Sbjct:   30 DIFSAYGEIYSVKIMWPRTEEERQRKRNCGFVSYMRRADAEDAKMAMHDQDLEG 83          
BLAST of mRNA_L-elsbetiae_contig21026.6374.1 vs. uniprot
Match: A0A7S2WJA8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJA8_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.430e-15
Identity = 33/57 (57.89%), Postives = 44/57 (77.19%), Query Frame = 0
Query:    1 SFQDAFSPFGKVYSIKIMWPRTDEERARKRNCGFVSFWRREDAVNAKRTMMDTDFEG 57
            +  D F  +G++YS+KIMWPRT+EERARKRNCGFVSF +REDA  AK  + + + +G
Sbjct:  228 ALNDIFGKYGEIYSVKIMWPRTEEERARKRNCGFVSFMQREDAEAAKAALNEIELDG 284          
BLAST of mRNA_L-elsbetiae_contig21026.6374.1 vs. uniprot
Match: A0A7S2WJ81_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJ81_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 2.440e-15
Identity = 33/57 (57.89%), Postives = 44/57 (77.19%), Query Frame = 0
Query:    1 SFQDAFSPFGKVYSIKIMWPRTDEERARKRNCGFVSFWRREDAVNAKRTMMDTDFEG 57
            +  D F  +G++YS+KIMWPRT+EERARKRNCGFVSF +REDA  AK  + + + +G
Sbjct:  228 ALNDIFGKYGEIYSVKIMWPRTEEERARKRNCGFVSFMQREDAEAAKAALNEIELDG 284          
BLAST of mRNA_L-elsbetiae_contig21026.6374.1 vs. uniprot
Match: H3GPP2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GPP2_PHYRM)

HSP 1 Score: 74.7 bits (182), Expect = 2.960e-14
Identity = 33/58 (56.90%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    1 SFQDAFSPFGKVYSIKIMWPRTDEERARKRNCGFVSFWRREDAVNAKRTMMDTDFEGE 58
            + Q  F  FG VYS+KIMWPR++EERAR+RNCGFVSF+ R DA +A+  M + + EG+
Sbjct:  220 ALQAEFGRFGDVYSVKIMWPRSEEERARRRNCGFVSFYERRDADDARINMSNKELEGQ 277          
BLAST of mRNA_L-elsbetiae_contig21026.6374.1 vs. uniprot
Match: A0A484EBR3_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EBR3_BRELC)

HSP 1 Score: 74.7 bits (182), Expect = 2.960e-14
Identity = 33/53 (62.26%), Postives = 43/53 (81.13%), Query Frame = 0
Query:    6 FSPFGKVYSIKIMWPRTDEERARKRNCGFVSFWRREDAVNAKRTMMDTDFEGE 58
            F  +G+VYSIKIMWPR++EERARKRNCGFVSF++R DA +A+  + D   EG+
Sbjct:  227 FGRYGEVYSIKIMWPRSEEERARKRNCGFVSFYKRRDADDARINLDDKQLEGQ 279          
BLAST of mRNA_L-elsbetiae_contig21026.6374.1 vs. uniprot
Match: A0A5D6Y506_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y506_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 2.970e-14
Identity = 33/58 (56.90%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    1 SFQDAFSPFGKVYSIKIMWPRTDEERARKRNCGFVSFWRREDAVNAKRTMMDTDFEGE 58
            + +  F  FG V+S+KIMWPRT+EERAR+RNCGFVSF+ R DA  A+  + DT+  GE
Sbjct:  433 TLETLFGKFGDVFSVKIMWPRTEEERARRRNCGFVSFFDRRDADEARTALHDTETNGE 490          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig21026.6374.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JCR2_9PHAE7.290e-2992.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FSA5_ECTSI4.710e-2889.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CAC0_9STRA6.520e-1870.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2DH44_9STRA8.820e-1863.16Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A7S3UX26_HETAK1.070e-1666.67Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2WJA8_9STRA2.430e-1557.89Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S2WJ81_9STRA2.440e-1557.89Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
H3GPP2_PHYRM2.960e-1456.90Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A484EBR3_BRELC2.960e-1462.26Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A5D6Y506_9STRA2.970e-1456.90Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 1..58
e-value: 3.7E-11
score: 44.9
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 3..57
e-value: 2.4E-8
score: 33.7
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 1..58
score: 9.763
NoneNo IPR availablePANTHERPTHR23140RNA PROCESSING PROTEIN LD23810Pcoord: 3..55
NoneNo IPR availablePANTHERPTHR23140:SF0SWAP/SURP DOMAIN-CONTAINING PROTEINcoord: 3..55
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 3..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig21026contigL-elsbetiae_contig21026:96..269 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig21026.6374.1mRNA_L-elsbetiae_contig21026.6374.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig21026 96..269 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig21026.6374.1 ID=prot_L-elsbetiae_contig21026.6374.1|Name=mRNA_L-elsbetiae_contig21026.6374.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=58bp
SFQDAFSPFGKVYSIKIMWPRTDEERARKRNCGFVSFWRREDAVNAKRTM
MDTDFEGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012677Nucleotide-bd_a/b_plait_sf
IPR000504RRM_dom
IPR035979RBD_domain_sf