prot_L-elsbetiae_contig2102.6372.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2102.6372.1
Unique Nameprot_L-elsbetiae_contig2102.6372.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length140
Homology
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BLAST of mRNA_L-elsbetiae_contig2102.6372.1 vs. uniprot
Match: D7FU85_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FU85_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 9.710e-29
Identity = 52/56 (92.86%), Postives = 55/56 (98.21%), Query Frame = 0 
Query:   84 QVLLGVTTICAICAIPVLRPNRPKPGHGLFDSEKPQAVELAQEEARRKKLNIGDRT 139
            +V +GVTTICAICAIPVLRPNRPKPGHGLFDSEKPQAVELAQEEARRKKLN+GDRT
Sbjct:   20 KVFVGVTTICAICAIPVLRPNRPKPGHGLFDSEKPQAVELAQEEARRKKLNVGDRT 75
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BLAST of mRNA_L-elsbetiae_contig2102.6372.1 vs. uniprot
Match: A0A835ZBU4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBU4_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 5.950e-10
Identity = 28/52 (53.85%), Postives = 37/52 (71.15%), Query Frame = 0 
Query:   84 QVLLGVTTICAICAIPVLRPNRPKPGHGLFDSEKPQAVELAQEEARRKKLNI 135
            Q L+G   +CAICAIP++   + KPGHGLFDSEKPQ +E AQ+  R+  L +
Sbjct:   16 QALVGTAIVCAICAIPMIN-RKTKPGHGLFDSEKPQEIEQAQDAQRKATLGV 66
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2102.6372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FU85_ECTSI9.710e-2992.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZBU4_9STRA5.950e-1053.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2102contigL-elsbetiae_contig2102:2238..2657 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2102.6372.1mRNA_L-elsbetiae_contig2102.6372.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2102 2159..3391 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2102.6372.1 ID=prot_L-elsbetiae_contig2102.6372.1|Name=mRNA_L-elsbetiae_contig2102.6372.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=140bp
MSAVCIRPICEKSSSGRHLGQQRHAVCTPQSVLGTQGRSEEIEGGRSLVT
KAMFANNARLPIHPPPHRHHWPSSSFCSNYRCCQVLLGVTTICAICAIPV
LRPNRPKPGHGLFDSEKPQAVELAQEEARRKKLNIGDRT*
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