prot_L-elsbetiae_contig2097.6342.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2097.6342.1
Unique Nameprot_L-elsbetiae_contig2097.6342.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length170
Homology
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BLAST of mRNA_L-elsbetiae_contig2097.6342.1 vs. uniprot
Match: D8LMX1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMX1_ECTSI)

HSP 1 Score: 139 bits (351), Expect = 3.820e-35
Identity = 124/162 (76.54%), Postives = 130/162 (80.25%), Query Frame = 0 
Query:    9 SERDGLLQKLSGSASGSSRGGGTGXAXXXXXXXXXXXXXXXXALARMKARVVELEARIKENXXXXXXXXRAEXXRAAAAKEAERLRAXXXXAKQRRAELQRTHREASTRFMKETRQLHLKDARMRRDGERMQWKVKKLQESQERTKAALKRKMEEHAIATRK 170
            SERDGLL KLS  AS  S     GX XXXXXXXXXXXX    ALA+MKARV ELEARI   XXXXXXXX   XX    AKEAERLR XXXX    RAELQRTHREASTRFMKETRQLHLKDARMRRDGERMQW+VKKLQESQERT+AALKRKMEEH++A +K
Sbjct:  750 SERDGLLHKLSRGASSYSSASRPGXXXXXXXXXXXXXXA---ALAKMKARVAELEARIXXXXXXXXXXXXXXXXXXXXAKEAERLRXXXXXXXXXRAELQRTHREASTRFMKETRQLHLKDARMRRDGERMQWQVKKLQESQERTQAALKRKMEEHSMAMKK 908
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BLAST of mRNA_L-elsbetiae_contig2097.6342.1 vs. uniprot
Match: A0A6H5K591_9PHAE (SAP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K591_9PHAE)

HSP 1 Score: 86.3 bits (212), Expect = 1.660e-16
Identity = 46/52 (88.46%), Postives = 51/52 (98.08%), Query Frame = 0 
Query:  119 MKETRQLHLKDARMRRDGERMQWKVKKLQESQERTKAALKRKMEEHAIATRK 170
            MKETRQLHLKDARMRRDGERMQW+VKKLQESQERT+AALKRKMEEH++A +K
Sbjct:    1 MKETRQLHLKDARMRRDGERMQWQVKKLQESQERTQAALKRKMEEHSMAMKK 52
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BLAST of mRNA_L-elsbetiae_contig2097.6342.1 vs. uniprot
Match: A0A835YYL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYL2_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 1.820e-10
Identity = 45/88 (51.14%), Postives = 61/88 (69.32%), Query Frame = 0 
Query:   83 RAAAAKEAERLRAXXXXAKQRRAELQRTHREASTRFMKETRQLHLKDARMRRDGERMQWKVKKLQESQERTKAALKRKMEEHAIATRK 170
            RA A +EAERLRA    AK+RRA LQ+   + +    +E  +  +  AR RR GER+QW+V+KLQE+  +T+A+L+RKMEEHA A RK
Sbjct:  731 RAEACREAERLRAEVEEAKRRRAGLQKQMADDAAAHRRERHEAAVAAARGRRQGERLQWEVRKLQEAHAKTQASLRRKMEEHAAAIRK 818
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2097.6342.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LMX1_ECTSI3.820e-3576.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K591_9PHAE1.660e-1688.46SAP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YYL2_9STRA1.820e-1051.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 143..163
NoneNo IPR availableCOILSCoilCoilcoord: 52..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2097contigL-elsbetiae_contig2097:452..2930 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2097.6342.1mRNA_L-elsbetiae_contig2097.6342.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2097 452..2932 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2097.6342.1 ID=prot_L-elsbetiae_contig2097.6342.1|Name=mRNA_L-elsbetiae_contig2097.6342.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=170bp
QGEVTSLQSERDGLLQKLSGSASGSSRGGGTGGAGGGSGGAAAAAAGGGA
ALARMKARVVELEARIKENRKKVAEHQRAERERAAAAKEAERLRAEVAEA
KQRRAELQRTHREASTRFMKETRQLHLKDARMRRDGERMQWKVKKLQESQ
ERTKAALKRKMEEHAIATRK
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