prot_L-elsbetiae_contig20870.6313.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig20870.6313.1
Unique Nameprot_L-elsbetiae_contig20870.6313.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length249
Homology
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BLAST of mRNA_L-elsbetiae_contig20870.6313.1 vs. uniprot
Match: Q8QN98_ESV1K (EsV-1-191 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN98_ESV1K)

HSP 1 Score: 141 bits (355), Expect = 1.230e-35
Identity = 88/255 (34.51%), Postives = 137/255 (53.73%), Query Frame = 0 
Query:    1 NGVRLTIVCDQCATSSDLVTKTTALQMGATLADLNSIHCMYKRNPHYRSASDMQLFVREEIDVLATIATAKKRRLKEEAMCKKQESDARQQRVKRS-RIESLAKRTQSLGGIV-----PTPGLVCGDFLSVHTKNPAVGTRSLLRRKAMWSRLATTEIPVAVQIFEWAVRNKQTNIAPAGALEEIRHEKHLFGRVAVVEGHRVLSFLDEVDRLTLLSLDPVFQETLYALPVRNISGELSKICDTVSRRLDLPFST 249
            NG+ LT VC+ C  S++L+TKT+A+ +GA + DL+ +    + NP+YR+A+   LF+ EE+  +A IA A + R +    CK +E  AR +R+K   R   L KR QS    +     PTPGLV GDF +  TK P +    L +R A+WS L    +   V +F +   N+    +       +++  H   RV + EG+RVL FL  ++RL +    P   + L+ LPV  +S ++  +C   S +L+   ST
Sbjct:   18 NGITLTRVCEGCLVSTELLTKTSAMSLGARVEDLDRLDHRREPNPYYRNAASTYLFLEEEVKYVAGIANADRERRECARKCK-EEIQARAKRMKHDDRARCLEKRIQSATSKIKTVSPPTPGLVSGDFCTSTTKTPKISVAKLAKRVAIWSSLNNFSLSHRVNLFRFGCANELYTFSGKEIESSVQNVHHSLDRVVLREGNRVLEFLTPMERLHVSRAVPFTHQELHGLPVSAMSDDMYALCQYTSAKLEKMRST 271
[Close]
BLAST of mRNA_L-elsbetiae_contig20870.6313.1 vs. uniprot
Match: D8LPL0_ECTSI (EsV-1-191 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL0_ECTSI)

HSP 1 Score: 137 bits (344), Expect = 4.810e-34
Identity = 85/255 (33.33%), Postives = 138/255 (54.12%), Query Frame = 0 
Query:    1 NGVRLTIVCDQCATSSDLVTKTTALQMGATLADLNSIHCMYKRNPHYRSASDMQLFVREEIDVLATIATAKKRRLKEEAMCKKQESDARQQRVKRS-RIESLAKRTQSLGGIV-----PTPGLVCGDFLSVHTKNPAVGTRSLLRRKAMWSRLATTEIPVAVQIFEWAVRNKQTNIAPAGALEEIRHEKHLFGRVAVVEGHRVLSFLDEVDRLTLLSLDPVFQETLYALPVRNISGELSKICDTVSRRLDLPFST 249
            NG+ LT VC+ C  S++L+TKT+A+ +GA + DL+ +    + NP+YR+A+   LF+ EE+  +A IA A + R +E A   K+E  +R +R+K   R + L KR Q+    +     PTPGLV GDF +  TK P +    L +R A+W  L+   +P  V +F +   N+   ++       +    +   +V + EG+RVL FL  ++RL      P   + L+ LPV  +S ++  +C   S +L+   ST
Sbjct:   18 NGITLTRVCEGCLVSTELLTKTSAMSLGARVEDLDRLDHRREPNPYYRNAASTYLFLEEEVKYVAGIANAARER-RECARKSKEEIQSRAKRMKHDDRSKCLEKRIQTATSRIKPVGPPTPGLVSGDFCTSATKTPKISVAKLAKRVAIWRSLSNLSLPPRVNLFRFGCANELYALSGEEIESAVASAHYSLDKVVLGEGNRVLQFLSPMERLHATRAVPSMHQELHGLPVSAMSDDMYALCQYTSVKLEKMRST 271
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20870.6313.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Q8QN98_ESV1K1.230e-3534.51EsV-1-191 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LPL0_ECTSI4.810e-3433.33EsV-1-191 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037129XPA domain superfamilyGENE3D3.90.530.10coord: 4..87
e-value: 2.1E-5
score: 26.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig20870contigL-elsbetiae_contig20870:14..760 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig20870.6313.1mRNA_L-elsbetiae_contig20870.6313.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig20870 14..760 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig20870.6313.1 ID=prot_L-elsbetiae_contig20870.6313.1|Name=mRNA_L-elsbetiae_contig20870.6313.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=249bp
NGVRLTIVCDQCATSSDLVTKTTALQMGATLADLNSIHCMYKRNPHYRSA
SDMQLFVREEIDVLATIATAKKRRLKEEAMCKKQESDARQQRVKRSRIES
LAKRTQSLGGIVPTPGLVCGDFLSVHTKNPAVGTRSLLRRKAMWSRLATT
EIPVAVQIFEWAVRNKQTNIAPAGALEEIRHEKHLFGRVAVVEGHRVLSF
LDEVDRLTLLSLDPVFQETLYALPVRNISGELSKICDTVSRRLDLPFST
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037129XPA_sf