prot_L-elsbetiae_contig2081.6295.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2081.6295.1
Unique Nameprot_L-elsbetiae_contig2081.6295.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length148
Homology
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BLAST of mRNA_L-elsbetiae_contig2081.6295.1 vs. uniprot
Match: A0A7S2W819_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W819_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 6.700e-5
Identity = 46/143 (32.17%), Postives = 68/143 (47.55%), Query Frame = 0 
Query:   15 GCESLDLSKTTMWKCLHDDPGTSKLLKQIYGGSRPEISYPKLRTAV----------PRSNLPPEFKDSRRSLSSSNAQKKTDKQVRVPKFRGARPKGPAPIDSVVMRRKRVGQIHEEQAAVRERVEHYRPPFIKPVGESEKSR 147
            G    D  +   WK         +LL+QIYG   P ++ P  R +           P SN   +  D RRS  S +     +K V++P+ R    +  + ID +V RRKR   I +E    + R+EHYRPP ++P+G+ EK R
Sbjct:   11 GTTMADQKENHAWKAFDTSSEAGRLLRQIYGSKPPPVNVPLPRRSRNPGPPTEGWRPVSNRVGQV-DPRRSTRSIDK----EKAVQIPR-RARADRSYSKID-LVSRRKRGDVIRDELQDAKMRMEHYRPPHLRPMGQ-EKDR 145
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2081.6295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S2W819_9STRA6.700e-532.17Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..147

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2081contigL-elsbetiae_contig2081:17737..19062 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2081.6295.1mRNA_L-elsbetiae_contig2081.6295.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2081 17701..19740 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2081.6295.1 ID=prot_L-elsbetiae_contig2081.6295.1|Name=mRNA_L-elsbetiae_contig2081.6295.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=148bp
MVLRHRALKLSLFFGCESLDLSKTTMWKCLHDDPGTSKLLKQIYGGSRPE
ISYPKLRTAVPRSNLPPEFKDSRRSLSSSNAQKKTDKQVRVPKFRGARPK
GPAPIDSVVMRRKRVGQIHEEQAAVRERVEHYRPPFIKPVGESEKSR*
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