prot_L-elsbetiae_contig2081.6294.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2081.6294.1
Unique Nameprot_L-elsbetiae_contig2081.6294.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length276
Homology
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BLAST of mRNA_L-elsbetiae_contig2081.6294.1 vs. uniprot
Match: D7FWR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR3_ECTSI)

HSP 1 Score: 350 bits (897), Expect = 5.680e-118
Identity = 169/275 (61.45%), Postives = 207/275 (75.27%), Query Frame = 0 
Query:    1 MDFLRTSEETSVRDALRELERNISPGVFDTCALRFLFKPQPKLKAAYCKARSVVLAGKIPSVSLHVRTGDNRKYHPEWYESLPLDVEHFVLCAAGFDEGLALVAADSPPSE-PDFEVFSTYKESVDTVWLLGTDSPTAVNILREGNRTVGGGGKVAFIEGDEFHRAHSGRKGGAASNNAGPLIDLALLSEAPLLVGSYGSTFSENAVELGGIPRPLRLFLPTPFAHIVSKDK-PLDKFDDYRQGCRDLVSRPSSRDDLRFALKARLEPWIDCREE 273
            MD LR +++ SV  AL +L   + P VF TCALRFL KP+P  K  YC+ RS VL GK  S+SLH+RTGDN  YH EWY++LP D+E+F  CA G +EGLA+VAA   P+  PDF++F T+KE  D VWLLGTDS   +++L+EG  TV  GGKVAF+EGDEFHR+HSG KGG  SNNAGPLIDLALLSEAPLLVGSY STFS+N  E+GG+P PLRLFL TPF H++ +     D+FDD+RQGCRD+VS PS+R+ LR ALK  LEPWI C ++
Sbjct:   47 MDLLRVNKQPSVARALGKLNVGVDPDVFGTCALRFLLKPRPDFKERYCEERSAVLGGKTASISLHLRTGDNPSYHAEWYKTLPTDLENFTACATGLEEGLAMVAAMYAPTPGPDFDIFRTFKERGDLVWLLGTDSSEVIDLLKEGEHTVAQGGKVAFVEGDEFHRSHSGNKGGKGSNNAGPLIDLALLSEAPLLVGSYCSTFSQNTAEIGGLPVPLRLFLSTPFHHLLGRSHVDWDRFDDFRQGCRDIVSDPSAREHLRVALKTNLEPWIRCDDQ 321
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BLAST of mRNA_L-elsbetiae_contig2081.6294.1 vs. uniprot
Match: A0A6H5JGH3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGH3_9PHAE)

HSP 1 Score: 341 bits (874), Expect = 8.620e-111
Identity = 165/275 (60.00%), Postives = 205/275 (74.55%), Query Frame = 0 
Query:    1 MDFLRTSEETSVRDALRELERNISPGVFDTCALRFLFKPQPKLKAAYCKARSVVLAGKIPSVSLHVRTGDNRKYHPEWYESLPLDVEHFVLCAAGFDEGLALVAADSPPSE-PDFEVFSTYKESVDTVWLLGTDSPTAVNILREGNRTVGGGGKVAFIEGDEFHRAHSGRKGGAASNNAGPLIDLALLSEAPLLVGSYGSTFSENAVELGGIPRPLRLFLPTPFAHIVSKDK-PLDKFDDYRQGCRDLVSRPSSRDDLRFALKARLEPWIDCREE 273
            MD LR +++ SV  AL +L  ++ P VF TCALRFL KP+P+ K  YC+ RS VL  K  S+SLH+RTGDN  YHPEWY++LP D+E+F  CA G +EGLA+VAA    +  PDF++FST+ E  D +W+LGTDS   +N+L EG  TV  GGKVAF+EG++FHR+HSG KGG  SNNAGPLIDLALLSEAPL VGSY STFS+N  E+GG+P PLRLFL TPF H++       D+FDD+RQGCRD+VS PSSR+ LR ALK  LEPWI C ++
Sbjct:  322 MDMLRVNKKPSVARALGKLNVDVDPDVFGTCALRFLLKPRPEFKGRYCEERSAVLGNKTASISLHLRTGDNPNYHPEWYKTLPTDLENFTACATGLEEGLAMVAAMYAATPGPDFDIFSTFMERRDLIWVLGTDSSEIINLLTEGEYTVAQGGKVAFVEGNKFHRSHSGNKGGKGSNNAGPLIDLALLSEAPLFVGSYCSTFSQNTAEIGGLPVPLRLFLSTPFHHLLGGSHVDWDRFDDFRQGCRDIVSDPSSREHLRVALKTNLEPWIRCDDQ 596
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2081.6294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FWR3_ECTSI5.680e-11861.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JGH3_9PHAE8.620e-11160.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11350coord: 49..214
e-value: 1.0E-7
score: 33.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2081contigL-elsbetiae_contig2081:6223..11472 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2081.6294.1mRNA_L-elsbetiae_contig2081.6294.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2081 5465..15305 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2081.6294.1 ID=prot_L-elsbetiae_contig2081.6294.1|Name=mRNA_L-elsbetiae_contig2081.6294.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=276bp
MDFLRTSEETSVRDALRELERNISPGVFDTCALRFLFKPQPKLKAAYCKA
RSVVLAGKIPSVSLHVRTGDNRKYHPEWYESLPLDVEHFVLCAAGFDEGL
ALVAADSPPSEPDFEVFSTYKESVDTVWLLGTDSPTAVNILREGNRTVGG
GGKVAFIEGDEFHRAHSGRKGGAASNNAGPLIDLALLSEAPLLVGSYGST
FSENAVELGGIPRPLRLFLPTPFAHIVSKDKPLDKFDDYRQGCRDLVSRP
SSRDDLRFALKARLEPWIDCREETP*
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