prot_L-elsbetiae_contig208.6284.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig208.6284.1
Unique Nameprot_L-elsbetiae_contig208.6284.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length98
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig208.6284.1 vs. uniprot
Match: D7FS39_ECTSI (AAA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS39_ECTSI)

HSP 1 Score: 107 bits (266), Expect = 6.790e-25
Identity = 65/98 (66.33%), Postives = 82/98 (83.67%), Query Frame = 0 
Query:    1 MKLDLAKILAKEKASLAVQTLHEAEKGMGKLDSMEESLRMSTEVALLLLDVEAAAQTARLSSNRRLSERLAYLKATKSAEREGEAAEVARIKIRGTEA 98
            M+L+LA  LA+EKASLAVQ L E +KG+ +L  +EESLRM+T+VALLLLD+EAA QTA+LSS+RRL+E LA L+ATK AEREGEA + ARI+ +G EA
Sbjct:  350 MELELAITLAEEKASLAVQNLREEQKGLEELIPVEESLRMATDVALLLLDMEAANQTAKLSSDRRLAEGLATLQATKEAEREGEATDKARIRAKGAEA 447
[Close]
BLAST of mRNA_L-elsbetiae_contig208.6284.1 vs. uniprot
Match: A0A6H5L202_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L202_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 2.210e-13
Identity = 40/59 (67.80%), Postives = 50/59 (84.75%), Query Frame = 0 
Query:   40 MSTEVALLLLDVEAAAQTARLSSNRRLSERLAYLKATKSAEREGEAAEVARIKIRGTEA 98
            M+T+VALLLLD+EAA QTA+LSSNRRL++ LA  +ATK AEREGEA + ARI+ +G EA
Sbjct:    1 MATDVALLLLDMEAANQTAKLSSNRRLAKSLATFQATKEAEREGEATDKARIRAKGAEA 59
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig208.6284.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FS39_ECTSI6.790e-2566.33AAA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L202_9PHAE2.210e-1367.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig208contigL-elsbetiae_contig208:38116..39040 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig208.6284.1mRNA_L-elsbetiae_contig208.6284.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig208 38116..39040 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig208.6284.1 ID=prot_L-elsbetiae_contig208.6284.1|Name=mRNA_L-elsbetiae_contig208.6284.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=98bp
MKLDLAKILAKEKASLAVQTLHEAEKGMGKLDSMEESLRMSTEVALLLLD
VEAAAQTARLSSNRRLSERLAYLKATKSAEREGEAAEVARIKIRGTEA
back to top