prot_L-elsbetiae_contig208.6280.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig208.6280.1
Unique Nameprot_L-elsbetiae_contig208.6280.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length221
Homology
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BLAST of mRNA_L-elsbetiae_contig208.6280.1 vs. uniprot
Match: A0A6H5LJ83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJ83_9PHAE)

HSP 1 Score: 210 bits (535), Expect = 9.640e-64
Identity = 108/137 (78.83%), Postives = 117/137 (85.40%), Query Frame = 0 
Query:    1 MQHHARGTRKVKPGVLNGILRQVTSADELKYATLGLQVFKTQGIDLHAKTGTLFVKACCKAGSPQTAVDALGEAGKYGLDAEGVVTAHRFNYLLSQLYKAGDSGGFARAVSEARSRPQSLNARSHTLIAKFEEEVRA 137
            MQ+HARGTRKVK  VLN IL +VTSA++LKYA LGL++FKTQGIDL  KT TLFVKACCKAGSPQ AVD LGEA KYGLD EGVV+AHRFNYLLSQLY AGDS  F RAVSEA  R QSLNARSHTLI+KFE E+RA
Sbjct:   98 MQYHARGTRKVKASVLNRILERVTSAEDLKYACLGLKIFKTQGIDLEKKTATLFVKACCKAGSPQMAVDVLGEAAKYGLDGEGVVSAHRFNYLLSQLYIAGDSETFTRAVSEAEHRQQSLNARSHTLISKFEGEMRA 234
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BLAST of mRNA_L-elsbetiae_contig208.6280.1 vs. uniprot
Match: D7FS35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS35_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 4.020e-27
Identity = 58/71 (81.69%), Postives = 60/71 (84.51%), Query Frame = 0 
Query:   67 AVDALGEAGKYGLDAEGVVTAHRFNYLLSQLYKAGDSGGFARAVSEARSRPQSLNARSHTLIAKFEEEVRA 137
            AVD LGEA KYGLD EGVV+AHRFNYLLSQLY AGDS  F RAVSEA  R QSLNARSHTLIAKFE E+RA
Sbjct:    2 AVDVLGEAAKYGLDGEGVVSAHRFNYLLSQLYIAGDSETFTRAVSEAEHRQQSLNARSHTLIAKFEGEMRA 72
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig208.6280.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LJ83_9PHAE9.640e-6478.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FS35_ECTSI4.020e-2781.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 128..203
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 10..200
e-value: 5.9E-8
score: 34.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig208contigL-elsbetiae_contig208:6542..8366 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig208.6280.1mRNA_L-elsbetiae_contig208.6280.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig208 6375..8975 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig208.6280.1 ID=prot_L-elsbetiae_contig208.6280.1|Name=mRNA_L-elsbetiae_contig208.6280.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=221bp
MQHHARGTRKVKPGVLNGILRQVTSADELKYATLGLQVFKTQGIDLHAKT
GTLFVKACCKAGSPQTAVDALGEAGKYGLDAEGVVTAHRFNYLLSQLYKA
GDSGGFARAVSEARSRPQSLNARSHTLIAKFEEEVRAKEEEAARAKAEEE
RVAKEAEEKAKREEEEAELKAKEEAAQEEARLKEEEENKAKGEAAAAELA
EDAGAPSSEGDAQPGVDAKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf