prot_L-elsbetiae_contig2075.6261.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2075.6261.1
Unique Nameprot_L-elsbetiae_contig2075.6261.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length158
Homology
BLAST of mRNA_L-elsbetiae_contig2075.6261.1 vs. uniprot
Match: A0A6H5JB99_9PHAE (Complex1_LYR_dom domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB99_9PHAE)

HSP 1 Score: 147 bits (371), Expect = 1.090e-41
Identity = 99/188 (52.66%), Postives = 108/188 (57.45%), Query Frame = 0
Query:    1 MLRDLKETFREG-HLASRRTAAFFLRVVSTKQ---GRVDVEEEKVLDRANPP--ARPRGSGSSSRGGVIMGG----------------------ALGLKEFMHRTRVLDLYRGILKRARSIGDQDVAAETRRQFKASRDETDPLKIQMLVADATNHLEAMQGSTRGAGSSGDGG--SWLDIHDPEDKR 158
            MLRD  E FREG H  + R      R  ST Q        E    +     P   RPR   SSS                              ALGLKEFMHR RVL+LYRGILKRAR++ D+DVA E RRQFK+   ETDPLK+QM+VADATNHLEAMQGSTRGAGS G GG  SWLDIHDPEDKR
Sbjct:   16 MLRDSTEAFREGSHTKNARPRVAPFRSASTMQQCAAACGTESTAAVWSCVDPWTGRPRPRSSSSXXXXXXXXXXXXXXXXXGSXXXXXXXXXXXALGLKEFMHRARVLELYRGILKRARALEDKDVADEARRQFKSCLGETDPLKVQMMVADATNHLEAMQGSTRGAGSGGRGGGDSWLDIHDPEDKR 203          
BLAST of mRNA_L-elsbetiae_contig2075.6261.1 vs. uniprot
Match: D8LRC8_ECTSI (Complex1_LYR_dom domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC8_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 9.730e-38
Identity = 68/87 (78.16%), Postives = 76/87 (87.36%), Query Frame = 0
Query:   74 MHRTRVLDLYRGILKRARSIGDQDVAAETRRQFKASRDETDPLKIQMLVADATNHLEAMQGSTRGAGSSGDGG--SWLDIHDPEDKR 158
            MHR RVL+LYRGILKRAR++ D+DVA E R+QFK+   ETDPLK+QM+VADATNHLEAMQGSTRGAGS G GG  SWLDIHDPEDKR
Sbjct:    1 MHRARVLELYRGILKRARALEDKDVADEARKQFKSCLGETDPLKVQMMVADATNHLEAMQGSTRGAGSGGGGGDHSWLDIHDPEDKR 87          
BLAST of mRNA_L-elsbetiae_contig2075.6261.1 vs. uniprot
Match: A0A835YQF9_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQF9_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 7.980e-14
Identity = 43/97 (44.33%), Postives = 66/97 (68.04%), Query Frame = 0
Query:   70 LKEFMHRTRVLDLYRGILKRARSIGD----QDVAAETRRQFKASRDETDPLKIQMLVADATNHLEAMQGSTRGAGSSGD----GGSWLDIHDPEDKR 158
            LK+F+ + +VL  YR +LK AR++ D    Q+VAA+ R +++A   ETD LK++ML+A+A  H++ +QG+   A +S D     GSWLD+ DPED+R
Sbjct:   31 LKDFVRKRQVLHSYRQLLKCARAMEDRPSGQEVAAQVRERYRAYAHETDSLKLRMLLAEAAQHIDTLQGTV--ARTSPDMPPPPGSWLDVDDPEDRR 125          
BLAST of mRNA_L-elsbetiae_contig2075.6261.1 vs. uniprot
Match: A0A8C3AAP9_CYCLU (LYR motif-containing protein 2 n=2 Tax=Cyclopterus lumpus TaxID=8103 RepID=A0A8C3AAP9_CYCLU)

HSP 1 Score: 55.5 bits (132), Expect = 5.450e-7
Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 0
Query:   67 ALGLKEFMHRTRVLDLYRGILKRARSIGDQD----VAAETRRQFKASRDETDPLKIQMLVADATNHLEAMQGSTRGAGS 141
            AL LK+F+ R RVL +YR +++  R + D+     ++   R +FK ++  TD   I+M++  A NHLE +QGS   AGS
Sbjct:   41 ALSLKQFLQRQRVLGIYRNMIRTIRKVPDEADRKYLSDWARDEFKRNKSATDQDAIRMMITQANNHLEELQGSLALAGS 119          
BLAST of mRNA_L-elsbetiae_contig2075.6261.1 vs. uniprot
Match: UPI001C03B48E (LYR motif-containing protein 2 n=1 Tax=Melanotaenia boesemani TaxID=1250792 RepID=UPI001C03B48E)

HSP 1 Score: 52.0 bits (123), Expect = 5.710e-6
Identity = 27/71 (38.03%), Postives = 44/71 (61.97%), Query Frame = 0
Query:   67 ALGLKEFMHRTRVLDLYRGILKRARSIGDQD----VAAETRRQFKASRDETDPLKIQMLVADATNHLEAMQ 133
            AL LK+F+HR RVL +YR +L+  R + D+     +    R +F+ ++D T+   I+M++  A NHLE +Q
Sbjct:   10 ALSLKQFLHRQRVLGIYRTMLRTIRQVPDEADRKYLKDWAREEFRRNKDATNQDAIRMMITQARNHLETLQ 80          
BLAST of mRNA_L-elsbetiae_contig2075.6261.1 vs. uniprot
Match: F0XAB2_GROCL (LYR motif-containing protein 2 n=1 Tax=Grosmannia clavigera (strain kw1407 / UAMH 11150) TaxID=655863 RepID=F0XAB2_GROCL)

HSP 1 Score: 49.7 bits (117), Expect = 5.850e-5
Identity = 30/72 (41.67%), Postives = 42/72 (58.33%), Query Frame = 0
Query:   66 GALGLKEFMHRTRVLDLYRGILKRARSIGDQDVAAETRR----QFKASRDETDPLKIQMLVADATNHLEAMQ 133
            G L L+ F+ R+RVL LYR I++    IGD  + AET R    +F+ +RD TD   I+ LV+      EAM+
Sbjct:   25 GTLSLEHFLQRSRVLALYRRIVRGTHHIGDPTLRAETHRYARGEFERNRDVTDLAHIRYLVSTGKTEWEAME 96          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2075.6261.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5JB99_9PHAE1.090e-4152.66Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
D8LRC8_ECTSI9.730e-3878.16Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A835YQF9_9STRA7.980e-1444.33Complex1_LYR_dom domain-containing protein n=1 Tax... [more]
A0A8C3AAP9_CYCLU5.450e-739.24LYR motif-containing protein 2 n=2 Tax=Cyclopterus... [more]
UPI001C03B48E5.710e-638.03LYR motif-containing protein 2 n=1 Tax=Melanotaeni... [more]
F0XAB2_GROCL5.850e-541.67LYR motif-containing protein 2 n=1 Tax=Grosmannia ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008011Complex 1 LYR proteinPFAMPF05347Complex1_LYRcoord: 78..130
e-value: 4.9E-9
score: 36.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2075contigL-elsbetiae_contig2075:14980..15796 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2075.6261.1mRNA_L-elsbetiae_contig2075.6261.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2075 13753..15796 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2075.6261.1 ID=prot_L-elsbetiae_contig2075.6261.1|Name=mRNA_L-elsbetiae_contig2075.6261.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=158bp
MLRDLKETFREGHLASRRTAAFFLRVVSTKQGRVDVEEEKVLDRANPPAR
PRGSGSSSRGGVIMGGALGLKEFMHRTRVLDLYRGILKRARSIGDQDVAA
ETRRQFKASRDETDPLKIQMLVADATNHLEAMQGSTRGAGSSGDGGSWLD
IHDPEDKR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008011Complex1_LYR