prot_L-elsbetiae_contig207.6233.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig207.6233.1
Unique Nameprot_L-elsbetiae_contig207.6233.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length562
Homology
BLAST of mRNA_L-elsbetiae_contig207.6233.1 vs. uniprot
Match: D7FHS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHS7_ECTSI)

HSP 1 Score: 421 bits (1083), Expect = 6.550e-138
Identity = 321/577 (55.63%), Postives = 355/577 (61.53%), Query Frame = 0
Query:    1 MARSKEFGDIGVSTSRRSNMDPPMSPRSTEHQRYATGSVVRDGIWFHTSPSSALEPAPGPGEYSPSIISNGYERGRTAKPSSGTVGRQAWDLRGSAGGAPLSNFRDGFTVSSSMGTAPRMGDFSQVSLRDGVLLLRGANDGHRSNGIGPGEYDGTSNRQDPMTKRSYNMRAQNSQVRRERSLSFSGTSSTARAFLSLV-----TDPNYHSKREATTGRPDLHLLGGMGRSA--ALGGLRSRRRCVSPASALLSSMRVRAAAAAERSDSAFGTRTGGESSRSLSPRRNRGRSASPIRGASGGRYGSGNGTRTDDAGRPR-SPFNQSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAASFSPQRRQHAVG----AGVGTLSAPSSPGHGRSRSNRSSNRSTVGGKRSPSTKGGGGGFGSDAPYTFDYFGVAGQRGAWRGLEGVAAARAEVGIEAPKKGQ-GKNAARCDGGPPGACNGQGGGGGDGARGVPXXXXXXXXXXSVVXXXXXXX----LLPEGVPAKGLCSPPKETRDDLHTYFEAASRA-----STGSSNLPAPPSPWA 555
            MA+SK+FG IGVSTSRRSNMDPP+SPRSTEHQR+ATGSVVRDG+WFH SP  A    PGPG YSPSIIS+ +ERGRTAKPSSG VGRQAWDLRGSAGG PLSNFR+GF+VSSSMGT PRM DF+QV+LRDGVLLLR ANDGHRSNGIGPGEY G SN QDPMTKRSYNMRAQ+SQ+RRERSLSFSGTSSTA+AFLSL      T P   S +EA + RPDLHLLG     A   +GG     R  SP                ER      T TG   SRSLSP+ NRGRS   IRGA+GGRYG G+G      G     P +Q  XXXXXXXXXX                                 +  P R +H       A   ++SAPSSP + R                            SDA YTFDYFG+AGQRG WRGLE V+AARAEVGIEA K    G N+ +       A   +GG     A G  XXXXXXXXXX   X          LLPE VPAKG+CSPPKETRDDLHTY+ A +R      ST  SNLP PPSP A
Sbjct:   41 MAKSKDFGHIGVSTSRRSNMDPPLSPRSTEHQRHATGSVVRDGVWFHPSPFLAA--GPGPGAYSPSIISSDHERGRTAKPSSGAVGRQAWDLRGSAGGTPLSNFRNGFSVSSSMGTTPRMVDFAQVALRDGVLLLRSANDGHRSNGIGPGEYHGVSNGQDPMTKRSYNMRAQSSQIRRERSLSFSGTSSTAKAFLSLASSMARTAPT-RSNKEAASCRPDLHLLGRNTYPAPGGVGGRGGDGRSTSPGK--------------ERR-----TDTG---SRSLSPKANRGRSGFAIRGAAGGRYGRGDGIGGVGHGPATFHPISQQXXXXXXXXXXXRQARTTSSGASRECRSLSPRGRDSGGRPVGGGRASPPLRAEHGSSRRKNATSVSISAPSSPRNSRXXXXXXXXXXXXXXXXXXXXXXXXXXX-SDASYTFDYFGLAGQRGVWRGLEAVSAARAEVGIEATKDNDDGHNSNK----QASATGSRGGNEAQSAAGXXXXXXXXXXXXXXXXARGRRGEPGSLLPERVPAKGVCSPPKETRDDLHTYYAAVNRTTAALDSTSGSNLPPPPSPRA 587          
BLAST of mRNA_L-elsbetiae_contig207.6233.1 vs. uniprot
Match: A0A6H5JYF7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYF7_9PHAE)

HSP 1 Score: 247 bits (631), Expect = 7.350e-72
Identity = 228/501 (45.51%), Postives = 255/501 (50.90%), Query Frame = 0
Query:  114 MGTAPRMGDFSQVSLRDGVLLLRGANDGHRSNGIGPGEYDGTSNRQDPMTKRSYNMRAQNSQVRRERSLSFSGTSSTARAFLSLV-----TDPNYHSKREATTGRPDLHLL--------------GGMGRSAALGGLRSRRRCVSPASALLSSMRVRAAAAAERSDSA--FGTRTGG--------------ESSRSLSPRRNRGRSASPIRGASGGRYGSGNGTRTDDAGRPR---------SPFNQSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRAASFSPQRRQHAVGAGVGT----LSAPSSPGHGRSRSNRSSNRSTVGGKRSPSTKGGGGGFGSDAPYTFDYFGVAGQRGAWRGLEGVAAARAEVGIEAPKKGQGKNAARCDGGPPGACNGQGGGGGDGARGVPXXXXXXXXXXSVVXXXXXXXLLPEGVPAKGLCSPPKETRDDLHTYFEAASRA-----STGSSNLPAPPSPWAPRPGSA 561
            MGT PRM DF+QV+LRDGVLLLR ANDGHRSNGIGPGEY G SN QDPMTKRSYNMRAQ+SQVRRERSLSFSGTSSTA+AFLSL      T+P   S +EA + RPDLHLL              GG GRS   G     RRCVSPASA+LSS+R RAAAAA  + +A  FG R+GG               S R  +      +SA P  GA+         T    A  P          S    +                                        P  A+  P R +        T    +SAPSSP + R RS       T GG       G GG  GSDA YTFDYFG+AGQRG WRGLE ++AARAEVGIEA K                                 XXXXXXXXXX+         LLPE  PAKG+CSPPKETRDDLHTY+ A +R      ST  SNLP PPSP A R G A
Sbjct:    1 MGTTPRMVDFAQVALRDGVLLLRSANDGHRSNGIGPGEYHGVSNGQDPMTKRSYNMRAQSSQVRRERSLSFSGTSSTAKAFLSLASSMARTNPT-RSNKEAASCRPDLHLLTRNTYPAPGGVGGRGGDGRSTFPG---KERRCVSPASAMLSSLRGRAAAAANGNGAAATFGLRSGGMRFFIVHLWPMAPAASLRRRTAAAPGSQSAGPPVGATAAAM-----TSVASAAVPSLFTLFLSSSSSSRGAVARHGRQAAGRAGGAVPCHRMAVTAAGGRSAAGGRCSLGQPVGAASPPLRAEPGSSRRKNTTSVSISAPSSPRNSR-RSTAKKYAPTTGGITGAVVGGRGGSNGSDASYTFDYFGLAGQRGVWRGLESISAARAEVGIEATKDNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKGRRGGPGSLLPERAPAKGVCSPPKETRDDLHTYYAAVNRTTAALDSTSGSNLPPPPSPRALRQGPA 491          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig207.6233.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FHS7_ECTSI6.550e-13855.63Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JYF7_9PHAE7.350e-7245.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig207contigL-elsbetiae_contig207:2452..8409 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig207.6233.1mRNA_L-elsbetiae_contig207.6233.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig207 2442..9331 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig207.6233.1 ID=prot_L-elsbetiae_contig207.6233.1|Name=mRNA_L-elsbetiae_contig207.6233.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=562bp
MARSKEFGDIGVSTSRRSNMDPPMSPRSTEHQRYATGSVVRDGIWFHTSP
SSALEPAPGPGEYSPSIISNGYERGRTAKPSSGTVGRQAWDLRGSAGGAP
LSNFRDGFTVSSSMGTAPRMGDFSQVSLRDGVLLLRGANDGHRSNGIGPG
EYDGTSNRQDPMTKRSYNMRAQNSQVRRERSLSFSGTSSTARAFLSLVTD
PNYHSKREATTGRPDLHLLGGMGRSAALGGLRSRRRCVSPASALLSSMRV
RAAAAAERSDSAFGTRTGGESSRSLSPRRNRGRSASPIRGASGGRYGSGN
GTRTDDAGRPRSPFNQSQQQQQQQQQQQQQQHFYQQPRGGRSLSPRNGGG
GGQASSSPRAASFSPQRRQHAVGAGVGTLSAPSSPGHGRSRSNRSSNRST
VGGKRSPSTKGGGGGFGSDAPYTFDYFGVAGQRGAWRGLEGVAAARAEVG
IEAPKKGQGKNAARCDGGPPGACNGQGGGGGDGARGVPAGTGGGGGSGSV
VGGGGPGSLLPEGVPAKGLCSPPKETRDDLHTYFEAASRASTGSSNLPAP
PSPWAPRPGSA*
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