prot_L-elsbetiae_contig2062.6216.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2062.6216.1
Unique Nameprot_L-elsbetiae_contig2062.6216.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length135
Homology
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Match: D7FX58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX58_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 2.940e-87
Identity = 125/135 (92.59%), Postives = 131/135 (97.04%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMSITDDQIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSED 135
            MFYLKEL+RPML+PPSDFGPK KDTIRRKLIEEVEGTSVGSLGFVITV +++DDQI MGTIEFDTGFANV+ VYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSED
Sbjct:    1 MFYLKELRRPMLVPPSDFGPKLKDTIRRKLIEEVEGTSVGSLGFVITVTNVSDDQIQMGTIEFDTGFANVLVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSED 135          
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Match: A0A835YX29_9STRA (S1 motif domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX29_9STRA)

HSP 1 Score: 171 bits (434), Expect = 4.680e-52
Identity = 84/137 (61.31%), Postives = 104/137 (75.91%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMS--ITDDQIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAG-GYDPVGDMWVSSE 134
            MFYLK LK+ +L+ P  FGP   + + R L+E+VEG S+G+ GFVI+V S    +  + MGTIE+DTG AN++  Y AICFRPF NEVLDA VS+VT+LGFFAEVGPLE+FVSR  MP+DIA  GYD VGDMWVS +
Sbjct:    1 MFYLKTLKKDLLLEPQFFGPNLHEVVGRLLLEQVEGMSLGNDGFVISVFSQNSANTSMEMGTIEYDTGAANIICTYEAICFRPFRNEVLDATVSNVTDLGFFAEVGPLEIFVSRFNMPEDIANTGYDSVGDMWVSED 137          
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Match: A0A6S9LV75_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LV75_HETAK)

HSP 1 Score: 169 bits (429), Expect = 2.780e-51
Identity = 80/134 (59.70%), Postives = 100/134 (74.63%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMSITDDQIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSE 134
            MF+LK+L R + +PP+  GPK K+TIRR+LIEEVEG +VG LG+VITV  + D+ I  G IE+D+GF     VY AICFRPF +EVLDA +S VTELGFFA+VGPL VFVSR  MP D+  GYDP  ++W S +
Sbjct:    1 MFFLKQLTRELQLPPAFLGPKLKETIRRRLIEEVEGQAVGKLGYVITVTEMKDEAISQGLIEYDSGFVTFNVVYSAICFRPFRDEVLDATISSVTELGFFADVGPLTVFVSRHAMPADLQEGYDPARELWQSED 134          
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Match: A0A7S2Y2T3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2T3_9STRA)

HSP 1 Score: 153 bits (387), Expect = 6.580e-45
Identity = 75/134 (55.97%), Postives = 95/134 (70.90%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMSITDDQIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSE 134
            MF+LKEL R +L+PP+  GPK K+TIRR+LIEEVEGT +G  G+VITV  + ++ +  G I  + G       Y AICFRPF  EVLDA V+ VTELGFFAEVGPL+VFVSR  MP D+  G+D   ++WVS +
Sbjct:    1 MFFLKELTRELLLPPAYLGPKIKETIRRRLIEEVEGTCLGKYGYVITVTEVKEEGMKTGVISNEFGEVIFHISYDAICFRPFKGEVLDANVTVVTELGFFAEVGPLQVFVSRHAMPQDLQEGFDAANEVWVSED 134          
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Match: A0A225WVR4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WVR4_9STRA)

HSP 1 Score: 150 bits (380), Expect = 5.610e-44
Identity = 73/134 (54.48%), Postives = 94/134 (70.15%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMSITDDQIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSE 134
            MF+LK+L R +L+ P  FGPK  D IR +LIEEVEGTS+G  G+VITV  + D+ I  G I+ ++GF      YRAI FRPF N+VLDA V+ V +LGFFA+VGPL+VFVSR  MP D+  GYD   + W+S +
Sbjct:    1 MFFLKQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDNSGFVCFNIRYRAILFRPFKNQVLDAVVTVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHESNAWISDD 134          
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Match: K3XAJ8_GLOUD (Uncharacterized protein n=27 Tax=Oomycota TaxID=4762 RepID=K3XAJ8_GLOUD)

HSP 1 Score: 150 bits (380), Expect = 6.930e-44
Identity = 73/134 (54.48%), Postives = 94/134 (70.15%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMSITDDQIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSE 134
            MF+LK+L R +L+ P  FGPK  D IR +LIEEVEGTS+G  G+VITV  + D+ I  G I+ ++GF      YRAI FRPF N+VLDA V+ V +LGFFA+VGPL+VFVSR  MP D+  GYD   + W+S +
Sbjct:    1 MFFLKQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDNSGFVCFNIRYRAILFRPFKNQVLDAVVTVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHENNAWISDD 134          
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Match: A0A024TU38_9STRA (Uncharacterized protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TU38_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.350e-43
Identity = 74/134 (55.22%), Postives = 92/134 (68.66%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMSITDDQIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSE 134
            MF+LK+LKR +L+ P  FGPK  D IR +LIEEVEGTS+G  G+VI V  + D+ I  G I+ ++GF      YRAI FRPF NEVLDA V+ V +LGFFAEVGPL+VFVSR  M  D+  GYD     W+S +
Sbjct:    1 MFFLKQLKRELLLHPMHFGPKLHDIIRLRLIEEVEGTSLGKFGYVIAVTEVRDEDIGQGVIQDNSGFVCFNIAYRAILFRPFKNEVLDAVVTVVNQLGFFAEVGPLQVFVSRHAMSTDLNEGYDHEQSAWISQD 134          
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Match: A0A425DP05_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DP05_9STRA)

HSP 1 Score: 149 bits (375), Expect = 1.790e-42
Identity = 73/134 (54.48%), Postives = 92/134 (68.66%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMSITDDQIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSE 134
            MF+LK+LKR +L+ P  FGPK  D IR +LIEEVEGTS+G  G+VI V  + D+ I  G I+ ++G+      YRAI FRPF NEVLDA V+ V +LGFFAEVGPL+VFVSR  M  D+  GYD     W+S +
Sbjct:    1 MFFLKQLKRELLLHPMHFGPKLHDIIRLRLIEEVEGTSLGKFGYVIAVTEVRDEDIGQGVIQDNSGYVCFNIAYRAILFRPFKNEVLDAVVTVVNQLGFFAEVGPLQVFVSRHAMSTDLNEGYDHEQSAWISQD 134          
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Match: A0A7S2HLJ0_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HLJ0_9STRA)

HSP 1 Score: 145 bits (366), Expect = 8.920e-42
Identity = 68/135 (50.37%), Postives = 92/135 (68.15%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMSITDD-QIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSE 134
            MF+ K+L+  +LI P   GPK K TIRR+LI+E+EG+ +  +G+V+ V  I D   I  G IE++TG  + +  Y A+ FRPF NEVLDA V+ V +LGFF + GPL+VFVSR  +P DI  G+DP  DMWVS +
Sbjct:    1 MFFYKKLRHEVLISPEYLGPKLKQTIRRRLIDEIEGSCINKIGYVVCVTDINDTTDIEAGLIEYETGHTSFMVTYGAVLFRPFKNEVLDATVTTVNQLGFFCKAGPLQVFVSRYNLPGDIREGFDPNQDMWVSED 135          
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Match: A0A024GUM2_9STRA (ING domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GUM2_9STRA)

HSP 1 Score: 150 bits (379), Expect = 5.800e-41
Identity = 73/134 (54.48%), Postives = 93/134 (69.40%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMSITDDQIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSE 134
            MF+LK+L R +L+ P  FGPK  D IR +LIEEVEGTS+G  G+VITV  + D+ I  G I+  +G+      YRAI FRPF N+VLDA VS V +LGFFA+VGPL+VFVSR  MP D+  GYD   + W+S +
Sbjct:  265 MFFLKQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDSSGYVCFNIRYRAILFRPFKNQVLDAVVSVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHENNAWISDD 398          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2062.6216.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX58_ECTSI2.940e-8792.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YX29_9STRA4.680e-5261.31S1 motif domain-containing protein n=1 Tax=Tribone... [more]
A0A6S9LV75_HETAK2.780e-5159.70Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2Y2T3_9STRA6.580e-4555.97Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A225WVR4_9STRA5.610e-4454.48Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
K3XAJ8_GLOUD6.930e-4454.48Uncharacterized protein n=27 Tax=Oomycota TaxID=47... [more]
A0A024TU38_9STRA1.350e-4355.22Uncharacterized protein n=8 Tax=Saprolegniaceae Ta... [more]
A0A425DP05_9STRA1.790e-4254.48Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A7S2HLJ0_9STRA8.920e-4250.37Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A024GUM2_9STRA5.800e-4154.48ING domain-containing protein n=1 Tax=Albugo candi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 84..135
e-value: 8.6E-12
score: 46.8
NoneNo IPR availablePANTHERPTHR12709DNA-DIRECTED RNA POLYMERASE II, IIIcoord: 1..120
NoneNo IPR availablePANTHERPTHR12709:SF4DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7coord: 1..120
IPR005576RNA polymerase Rpb7-like , N-terminalPFAMPF03876SHS2_Rpb7-Ncoord: 13..79
e-value: 8.1E-10
score: 38.9
IPR003029S1 domainPFAMPF00575S1coord: 80..118
e-value: 2.9E-4
score: 21.1
IPR036898RNA polymerase Rpb7-like, N-terminal domain superfamilyGENE3D3.30.1490.120coord: 1..83
e-value: 5.0E-23
score: 83.2
IPR036898RNA polymerase Rpb7-like, N-terminal domain superfamilySUPERFAMILY88798N-terminal, heterodimerisation domain of RBP7 (RpoE)coord: 1..80
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 81..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2062contigL-elsbetiae_contig2062:12248..17409 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2062.6216.1mRNA_L-elsbetiae_contig2062.6216.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2062 12248..17663 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2062.6216.1 ID=prot_L-elsbetiae_contig2062.6216.1|Name=mRNA_L-elsbetiae_contig2062.6216.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=135bp
MFYLKELKRPMLIPPSDFGPKFKDTIRRKLIEEVEGTSVGSLGFVITVMS
ITDDQIHMGTIEFDTGFANVVAVYRAICFRPFVNEVLDAAVSHVTELGFF
AEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSED
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005576Rpb7-like_N
IPR003029S1_domain
IPR036898RNA_pol_Rpb7-like_N_sf
IPR012340NA-bd_OB-fold