prot_L-elsbetiae_contig2053.6189.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2053.6189.1
Unique Nameprot_L-elsbetiae_contig2053.6189.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length363
Homology
BLAST of mRNA_L-elsbetiae_contig2053.6189.1 vs. uniprot
Match: A0A6H5KHK1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHK1_9PHAE)

HSP 1 Score: 424 bits (1090), Expect = 6.650e-144
Identity = 222/364 (60.99%), Postives = 274/364 (75.27%), Query Frame = 0
Query:    1 MKGVRGASTCWISAALALGWVSRVSGHSQLVMEQKFHMDTTTCEGASCRREIIGANETLGVGSVMDCSPRTTYWHGDLENAPKDSKEKLFDLVYSCRKESPGGEKMLM-SWEECGMVVEPCLDAGTNPDTFEVTYQIAFEFKSEVRLDYDVTVDVKLYFNYLRADEAFYSLRSKDAILCLMSESCHRRCESGEWGFTAELEDTIGDGWNAGGINLFDHFKLDSRSELMSEVAAAMDSGEADPETATA-AARRASYKNTMLGGSIRKVPVCLADGEYLFSTEFQNADAEAPTTYGPYSAAASAFSVGGRHFYESQWTFCGYTGMLSEYTHILVADGLCTPILGWGETAAPAVTPITGITPAPTPA 362
            M+G   A    + AA+ L  V  V+GHSQLVMEQ F+M+T++CEG SCR+EIIGANETLGVG+V +CS  T YWH DLE AP    ++LF+LVYSCRK  P GE++++ S EECGMV EPC+DAGTNP   EVTYQ+AFEF+++    YDV+VDVKL+FNYL+A + F++ RS++A+ CL+SE+CHRR  SGEW F AEL D++GDGWNAGGINLFDHF+L+SRSEL +EV+A M S EA+   A + AARR SY NTMLGGS R VP+CL+DGEYLFST+F         T GP   ++ AF V GR F ES WTFCG+ G L++YTH+ VA GLCTPI GWGETAAP+ TP  G T  PTPA
Sbjct:    1 MRGSWRAGLSSLGAAMMLSKVGLVNGHSQLVMEQTFYMETSSCEGVSCRKEIIGANETLGVGAVEECSHNTAYWHEDLE-APNG--KQLFELVYSCRKHGPDGEEVVLTSLEECGMVAEPCVDAGTNPGISEVTYQVAFEFEAQ---PYDVSVDVKLFFNYLKAGDKFHAKRSENAVRCLLSETCHRR-RSGEWSFPAELRDSMGDGWNAGGINLFDHFRLESRSELTAEVSAMMSSDEANTAAAPSPAARRTSYLNTMLGGSARTVPLCLSDGEYLFSTQFH--------TPGP-DDSSHAFDVAGRLFSESTWTFCGHKGTLADYTHVRVAGGLCTPIAGWGETAAPSATPFLGATLVPTPA 348          
BLAST of mRNA_L-elsbetiae_contig2053.6189.1 vs. uniprot
Match: D7G3N1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3N1_ECTSI)

HSP 1 Score: 380 bits (976), Expect = 2.800e-128
Identity = 192/318 (60.38%), Postives = 240/318 (75.47%), Query Frame = 0
Query:   21 VSRVSGHSQLVMEQKFHMDTTTCEGASCRREIIGANETLGVGSVMDCSPRTTYWHGDLENA-PKDSKEKLFDLVYSCRKESPGGEKMLM-SWEECGMVVEPCLDAGTNPDTFEVTYQIAFEFKSEVRLDYDVTVDVKLYFNYLRADEAFYSLRSKDAILCLMSESCHRRCESGEWGFTAELEDTIGDGWNAGGINLFDHFKLDSRSELMSEVAAAMDSGEADPETATAAA---RRASYKNTMLGGSIRKVPVCLADGEYLFSTEFQNADAEAPTTYGPYSAAASAFSVGGRHFYESQWTFCGYTGMLSEYTHILVADG 333
            V+ VSGHSQLVMEQ F+M+T++CEG SCR+EIIGANETLGVG+V +CS  TTYWH DL+   P  + ++LF+LVYSCRK  P GE++++ S EECGMV EPC+DAGTNP   EVTYQ+AFEF+++    YDV+VDVKLYFNYL+A + F++ RS++A+ CL+SE+CHRRCESGEWGF AEL D++GDGWNAGGINLFDHF+L+SRSEL +EV+A M S               RR SY NTMLGGS R VP+CL++GEYLFST+F         T GP    + AF V GR F ES WTFCG+ G L++YTH+ V +G
Sbjct:    6 VALVSGHSQLVMEQTFYMETSSCEGVSCRKEIIGANETLGVGAVEECSHNTTYWHEDLDQRLPAPTGKQLFELVYSCRKHGPDGEEVVLTSLEECGMVAEPCVDAGTNPGISEVTYQVAFEFEAQ---SYDVSVDVKLYFNYLKAGDKFHAKRSENAVRCLLSETCHRRCESGEWGFPAELRDSMGDGWNAGGINLFDHFRLESRSELTAEVSAMMSSDXXXXXXXXXXXXXXRRTSYLNTMLGGSARTVPLCLSEGEYLFSTQFH--------TPGP-GDPSHAFDVAGRLFSESTWTFCGHEGTLADYTHVRVNNG 311          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2053.6189.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KHK1_9PHAE6.650e-14460.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3N1_ECTSI2.800e-12860.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..363
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.673

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2053contigL-elsbetiae_contig2053:6865..11091 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2053.6189.1mRNA_L-elsbetiae_contig2053.6189.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2053 6865..11307 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2053.6189.1 ID=prot_L-elsbetiae_contig2053.6189.1|Name=mRNA_L-elsbetiae_contig2053.6189.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=363bp
MKGVRGASTCWISAALALGWVSRVSGHSQLVMEQKFHMDTTTCEGASCRR
EIIGANETLGVGSVMDCSPRTTYWHGDLENAPKDSKEKLFDLVYSCRKES
PGGEKMLMSWEECGMVVEPCLDAGTNPDTFEVTYQIAFEFKSEVRLDYDV
TVDVKLYFNYLRADEAFYSLRSKDAILCLMSESCHRRCESGEWGFTAELE
DTIGDGWNAGGINLFDHFKLDSRSELMSEVAAAMDSGEADPETATAAARR
ASYKNTMLGGSIRKVPVCLADGEYLFSTEFQNADAEAPTTYGPYSAAASA
FSVGGRHFYESQWTFCGYTGMLSEYTHILVADGLCTPILGWGETAAPAVT
PITGITPAPTPAD
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