prot_L-elsbetiae_contig20506.6181.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig20506.6181.1
Unique Nameprot_L-elsbetiae_contig20506.6181.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length104
Homology
BLAST of mRNA_L-elsbetiae_contig20506.6181.1 vs. uniprot
Match: D7FX95_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX95_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 7.000e-54
Identity = 93/104 (89.42%), Postives = 98/104 (94.23%), Query Frame = 0
Query:    1 QYHTPLAVGTLLGLTTMMSQFMFVLFSVFLALAEYADAGSLARGDRTMAVFSFFLFLLYGLFSFVLGRYRTTVMNTPGTSSSNEGEGEWQDEPGTE-MAPGTPV 103
            +YHTPLAVGTLLGLTTMMSQFMFVLF+VFLALAEYAD   LA GDRTMAVFSFFLFLLYGLFSFVLGRYRTTVMNTPGT+SSN+ EGEWQDEPGT+ MAPGTPV
Sbjct:   84 KYHTPLAVGTLLGLTTMMSQFMFVLFAVFLALAEYADEPGLATGDRTMAVFSFFLFLLYGLFSFVLGRYRTTVMNTPGTASSND-EGEWQDEPGTDGMAPGTPV 186          
BLAST of mRNA_L-elsbetiae_contig20506.6181.1 vs. uniprot
Match: A0A835Z9F7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9F7_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 8.240e-17
Identity = 43/76 (56.58%), Postives = 56/76 (73.68%), Query Frame = 0
Query:    1 QYHTPLAVGTLLGLTTMMSQFMFVLFSVFLALAEYADAGSLARGDRTMAVFSFFLFLLYGLFSFVLGRYRTTVMNT 76
            +YHTPLAVG LLGLT+M+SQ +FVLF+VFLAL +  ++G+    D  MA F F LF L+ LFS VL ++R TV+ T
Sbjct:   87 KYHTPLAVGLLLGLTSMLSQLLFVLFAVFLALGQ--ESGTHQDSDHAMAAFMFILFFLFLLFSIVLAKFRMTVIET 160          
BLAST of mRNA_L-elsbetiae_contig20506.6181.1 vs. uniprot
Match: W7TD56_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TD56_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 2.910e-7
Identity = 31/80 (38.75%), Postives = 46/80 (57.50%), Query Frame = 0
Query:    4 TPLAVGTLLGLTTMMSQFMFVLFSVFLALAEYADAGSLARGDRTMAVFSFFLFLLYGLFSFVLGRYRTTVMNTPGTSSSN 83
            TP+A G  LG   M SQ   +LF++F+ LA+ +      R +  MAVF+FFLF+LY +FS  L  +R  V++     + N
Sbjct:  107 TPIATGVFLGACIMYSQMQLLLFAIFVGLAQTSSGDVERRSNNAMAVFAFFLFILYTVFSVCLYFFRHYVIDDAPAPAEN 186          
BLAST of mRNA_L-elsbetiae_contig20506.6181.1 vs. uniprot
Match: A0A6A3XBJ2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XBJ2_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.670e-5
Identity = 35/82 (42.68%), Postives = 48/82 (58.54%), Query Frame = 0
Query:    1 QYHTPLAVGTLLGLTTMMSQFMFVLFSVFLALAEYADAGSLARGDRTM--------AVFSFFLFLLYGLFSFVLGRYRTTVM 74
            ++ TPLAVG L+G+  MMS  MF L S+  A A Y      A+GD           +VFSFF+F+LY +F+ VL R+R  V+
Sbjct:  136 KHQTPLAVGFLIGVVLMMSLQMFSL-SIIFAGAAYLARIERAKGDEHTNVHSNEAGSVFSFFMFILYAVFTIVLVRHRNIVI 216          
BLAST of mRNA_L-elsbetiae_contig20506.6181.1 vs. uniprot
Match: A0A6A3TJI2_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TJI2_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 2.800e-5
Identity = 35/82 (42.68%), Postives = 48/82 (58.54%), Query Frame = 0
Query:    1 QYHTPLAVGTLLGLTTMMSQFMFVLFSVFLALAEYADAGSLARGDRTM--------AVFSFFLFLLYGLFSFVLGRYRTTVM 74
            ++ TPLAVG L+G+  MMS  MF L S+  A A Y      A+GD           +VFSFF+F+LY +F+ VL R+R  V+
Sbjct:  153 KHQTPLAVGFLIGVVLMMSLQMFSL-SIIFAGAAYLARIERAKGDEHTNVHSNEAGSVFSFFMFILYAVFTIVLVRHRNIVI 233          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20506.6181.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FX95_ECTSI7.000e-5489.42Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9F7_9STRA8.240e-1756.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TD56_9STRA2.910e-738.75Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A6A3XBJ2_9STRA2.670e-542.68Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A6A3TJI2_9STRA2.800e-542.68Uncharacterized protein n=6 Tax=Phytophthora TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 68..103
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..48
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..67
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..33
NoneNo IPR availableTMHMMTMhelixcoord: 49..66
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig20506contigL-elsbetiae_contig20506:1344..2389 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig20506.6181.1mRNA_L-elsbetiae_contig20506.6181.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig20506 1344..2389 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig20506.6181.1 ID=prot_L-elsbetiae_contig20506.6181.1|Name=mRNA_L-elsbetiae_contig20506.6181.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=104bp
QYHTPLAVGTLLGLTTMMSQFMFVLFSVFLALAEYADAGSLARGDRTMAV
FSFFLFLLYGLFSFVLGRYRTTVMNTPGTSSSNEGEGEWQDEPGTEMAPG
TPV*
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