prot_L-elsbetiae_contig20432.6156.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig20432.6156.1
Unique Nameprot_L-elsbetiae_contig20432.6156.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length117
Homology
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BLAST of mRNA_L-elsbetiae_contig20432.6156.1 vs. uniprot
Match: A0A6H5KQV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQV5_9PHAE)

HSP 1 Score: 67.4 bits (163), Expect = 1.100e-10
Identity = 39/78 (50.00%), Postives = 50/78 (64.10%), Query Frame = 0 
Query:   15 SAEARIQELKGRQNLKINPVTLGAGDVSLPSPA-PFSPGTDWDLARGLAPSPACGSAYDDDYGDGGDGPTGRRRSGMV 91
            +AEARIQEL+ RQ ++  PVT  A  +S+PSP  P +PGTDWDLA+G+APSP               GP GRRR+ M+
Sbjct:  481 TAEARIQELRDRQGVEATPVTFPAS-MSMPSPGGPVTPGTDWDLAQGIAPSP---------------GPNGRRRTLMI 542
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20432.6156.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KQV5_9PHAE1.100e-1050.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig20432contigL-elsbetiae_contig20432:1083..1804 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig20432.6156.1mRNA_L-elsbetiae_contig20432.6156.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig20432 1083..1804 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig20432.6156.1 ID=prot_L-elsbetiae_contig20432.6156.1|Name=mRNA_L-elsbetiae_contig20432.6156.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=117bp
GFSTKPHSASEGRISAEARIQELKGRQNLKINPVTLGAGDVSLPSPAPFS
PGTDWDLARGLAPSPACGSAYDDDYGDGGDGPTGRRRSGMVDPSSGVVPA
GQASRKHRSQRPRGDED
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